Information report for Tc01v2_g012340
Gene Details
|
|
Functional Annotation
- Encodes a cytosine methyltransferase MET1. Required for silencing of FWA paternal allele in endosperm. Two lines with RNAi constructs directed against DMT1 have reduced agrobacterium-mediated tumor formation.
Homologous
- Daucus carota: DCAR_009626
- Glycine max: Glyma.04G187600, Glyma.06G178200
- Gossypium hirsutum: Gohir.D04G042500
- Juglans regia: Jr09_06540
- Manihot esculenta: MANES_13G119400, MANES_13G155300
- Medicago truncatula: Medtr6g065580, Medtr2g046020
- Nicotiana attenuata: A4A49_19701
- Populus trichocarpa: POPTR_004G134000v3, POPTR_018G138000v3, POPTR_T046100v3
- Prunus avium: Pav_sc0000113.1_g130.1.mk
- Prunus persica: PRUPE_7G183100
- Vitis vinifera: VIT_07s0130g00390, VIT_07s0130g00380
Sequences
CDS Sequence
- >Tc01v2_g012340
ATGGGATCTGTGGCTCTTTTGGATTCTAATTCTTCTTCAGGTATGAAGAAGAATAGGAAAGGTAAACAGAGATCTGCGATCCCTCCTACCAAGAAAGAGATAGAAGCTGATCAAAAAGGTAAAAGGCGTAATGTTCCTCAGGAAAATAGCGAGCCAGCTGGTTCTTTAAAAAGGCCAAAGCGAGCTGCAGCCTGTACAGATTTTAAGGAGAAGTCTGTACGCATATCTGAAAAATCCTCAATTATTGAAACAAAAAAGGATATGTTAGCAGACGATGAAATTGTAGCTGTAGGGCTGACTTCTGAAAAAGATGATGGTCGGCCTAATAGGAGGCTCAATGACTTTGTATTGCATGATTCATCAGGTCTTCCACATCCACTTGAGATGTTGGAAGTCCATGACATGTTCATAACTGGTTTGATATTACCCCTTGAAGAAAGCTCGGACAAGGTCAAGGAAAAGGAGAAGAGTTTTAGATGTGAAGGATTTGGACGTGTTGAGTCTTGGGCCATATCTGGTTATGAAGATGGTTGTCCAGTGATATGGCTTTCAACTGATGTTGCTGATTACAGCTGTTGTAAGCCTGCAAGCAGCTATAAGAAATTTTACGAGCATTTCTTTGAAAAAGCTCGTGCTTGCGTAGAGGTTTATAAAAAACTTTCAAAGTCTTCTGGTGGGAATCCTGACTTAAGTCTTGACGAGTTGCTTGCTGGGGTTGTTCGATCGATGACTGGTAGCAAGTGCTTCTCAGGTGGGGCATCAATTAAGGATTTTGTCATTTCCCAGGGAGAATTTATTTATAACCAACTGATAGGTTTAGATGAGACATCAAAGAAGAACGACCAGGTATTTGCAGGTTTGCCTGTTCTTGCTGCCCTTAGAGATGAGAGTCAAAAGCGTGAAAATATAGGGCACGAAAGAGCAGCATTTTTGGGTGGAACTCTGACTATTGGTAAAATATTTGGAGAGGGAGACAGCAAACTGGATCAGTCAAATTCATCTGCTTTTGCTGCTGAGGAAGATGAGGATGCAAAGTTCGCAAGAGTGTTGCAAGAGGAAGAATACTGGAAATCCATGAAACAGAAGAAAAATCAAGGTTCAGCCTCCATGTCAAACAAATTTTACATCAAAATCAATGAAGATGAGATCGCTAATGATTATCCTCTCCCGGCATACTACAAGACTTCCAATGAAGAAACCGACGAGCTTGTAGTTTTTGACAATGACTTTGATGTTTGTGATCCTGAGGATCTCCCAAGAAGCATGCTCCACAACTGGTCATTTTACAATTCAGACTCAAGGTTGATTTCACTGGAGCTTCTTCCAATGAAACCATGTGCTGACATTGATGTTACCATCTTTGGGTCTGGGGTTATGACTGCTGATGATGGAAGTGGATTCTGTCTTGATAATGATCCTAGTCATTCTACTTCAGGTTCTTCAACTGCACTGAATGTTGATGGGATTCCGATTTATTTGAGTGCAATAAAGGAATGGATGATTGAATTTGGATCCTCAATGATTTTCATATCAGTGAGGACAGATATGGCCTGGTATAGACTTGGCAAACCATCAAAGCAATATCTTCCTTGGTATGAACCGGTACTCAAAACTGCAAGACTCGCAATAAGCATTATTACATTGTTAAAGGAGCAAAGCCGAATATCTCGCCTCTCTTTCAATGATGTCATCAGAAGAGTGTCTGAGTTCAAGAAGGATAATTGTGCTTTCTTATCTTCTGATCCAGCAGCTGTTGAGAGGTACATTGTTGTTCATGGACAGATAATTCTACAACTCTTTGCAGTGTTTCCTGATGAGAATATTAAGAAGTGTGCATTTGTGGCTGGGCTTACTACAAAAATGGAGGAGAGACACCATACAAAATGGTTAGTGAAGAAGAAGAAAGTTGTGCACAATAGTGAACCAAATTTGAATCCGCGAGCAGCCATGGTACCTGTAGCATCTAAGAGAAAGGTTATGCAGGCAACCACAACAAGGCTAATCAACAGAATTTGGGGGGAGTACTATTCAAATTACTTGCCAGAAGAGTCAAAGGAGGAAACTGGTTCTGTGGAGAAAGAAGAGGAAGATGAAAATGAGGAACAGGAGGAAAATGAAGATGACGATGCTGAAGAAGATAAATCAATATTAAAGGAGACACAGAAGTCTCCTTCAGTATCAAGGCGATCCAGACGATGTTCCACCAAGGAGGAAATAAGATGGGATGGAGAGCCTGTAAGCAAAACGAGCTCTGATGAGCCTCTTTATAAGCAAGCCATTATTTATGGAGAGGTAATTGTTGTTGGAAGTGCTGTTCTTGTTGAAGTTGATTCATATGAACTTCCCGCTATCTATTTTGTGGAATACATGTTTGAATCATCGGAGGGAAGCAAAATGTTTCATGGACGGATGATGCAGAGAGGATCTGAAACTGTACTGGGTAATGCTGCTAATGAGAGAGAGGTGTTTCTAACAAATGATTGTGGGGATTTTGAATTGGAGGATGTGAAACAGACTGTTGCTGTGGATATTTGGTTAGTTCCTTGGGGATATCAGCACCGGAAAGATAATGCCAACATGGCCAAATCTGATAAAACAAAAGCAGAAGAGCGGAAGAGAAAAGGATTGCCAATGGAGTATTATTGCAAAAGCTTGTATTGCCCTGATAGGGGAGCTTTCTTTAGGCTTCCCTTTGATAGTTTGGGTTTGGGTTCTGGTTTCTGTTACTCTTGCAAAGTTAAGGATGCTGGAAAGGACAAAGAAATGTTTAAAGTGAATTCATTAAAGACAGGCTTTGTGTACAGGGGAATTGAGTACTCTGTCCATGATTATGTCTATGTAAGCCCCCATCAATTTGCACTAGAAAGGGCTGAGAATGAAAACTTTAAGGGTGGGAGGAATATAGGCTTGAAGCCTTATGTTGTGTGCCAAGTGCTGGAGATCATTGTACTAAAAGAACTGGAAAAAGCTGGAAAGGAGTCCACCCAGATTAAAGTCAGGAGATTTTTCAGGCCAGAGGACATTTCAGCTGAGAAAGCTTACTCTTCTGATATTCGAGAGGTCTATTATAGTGAAGAAACACATATGTTGTCTGTTGAGGCAATAGAAGGGAAATGTGAAGTCAGAAAGAGGAATGACCTTCCTGAAGCTAGTGCTCCAGCAATCTTTCATGATATCTTTTTTTGTGATCGCATATATGATCCTTCCAAAGGTTCCCTCAAGCAGTTACCCACTCAGATCAAACTAAGGTACTCCACTGGCATTGTGGATAATGACATTGCATATCAAAAGAAAAAGGGAAAGAGTAAAGAGGGGGAGAATGAGTCTGAAGTTAAGAAACAAGGAGAAGCAGCTCAGGAGAATCGCTTGGCTACATTAGACATATTTGCAGGTTGTGGTGGCCTGTCAGAGGGGTTGCATCAATCTGGTGCATCATTAACTAAATGGGCAATCGAATATGAAGAGCCTGCTGGAGATGCATTTAAACTCAATCATCCTGGGTCTTTGGTGTTTATTAATAACTGTAATGTGATTCTTAGGGCTATTATGGAGAAGTGTGGGGATGCAGATGACTGTATCTCCACTTCTGAGGCAGCTGAGTTAGCTGGATCACTAGATGAGAAAGAGATTAATAATTTGCCTTTGCCGGGGCAAGTAGATTTCATCAATGGAGGTCCTCCATGCCAGGGTTTCTCTGGAATGAATAGGTTTAATCAAAGTACATGGAGTAAAGTACAATGTGAGATGATTTTAGCATTCTTGTCATTCGCTGATTACTTTCGGCCAAGGTATTTCCTCCTAGAGAATGTGAGGAACTTTGTGTCTTTCAATAAAGGACAGACGTTTCGTTTAACTCTGGCTTCACTTCTTGACATGGGTTATCAGGTGAGGTTTGGTATTTTGGAAGCTGGAGCCTATGGAGTTTCCCAATCAAGAAAACGAGCATTTATATGGGCAGCCTCCCCTGAAGAGACTCTGCCGGAATGGCCAGAGCCAATGCATGTCTTTGCTGTGCCTGAGTTGAAAATCACATTATCAAATAATTTGCAGTATGCAGCTGTGAGAAGTACTGCAAGTGGAGCCCCTTTCCGTGCAATTACTGTGAGAGATACAATCGGTGATCTGCCAGCTGTAGGAAATGGGGCCTCAAAGACAAATTTGGAGTATCAAAATGAACCCATCTCATGGTTTCAAAAGAAAATTCGAGGGAACATGGCTGTCCTCACTGATCATATATCAAAGGAAATGAATGAACTTAATCTGATTCGGTGTCAAAAGATTCCAAAGCGACCAGGTGCAGATTGGCATGACCTTCCAGATGAGAAGGTAAAACTCTCAACTGGACAAGTGGTAGATTTAATACCCTGGTGCCTGCCGAATACGGCCAAAAGACACAATCAGTGGAAAGGGCTGTTTGGAAGGTTGGATTGGGAAGGGAACTTCCCAACTTCCATCACAGACCCTCAACCGATGGGAAAGGTTGGAATGTGCTTTCATCCTGAGCAGGACAGGATTCTCACAGTCCGTGAATGTGCCCGTTCTCAAGGTTTCCCAGATGGCTACCAGTTTGCTGGTAACATTCAACACAAGCACCGGCAGATAGGAAATGCTGTTCCTCCTCCTTTGGCATTTGCATTGGGGAGAAAACTCAAGGAAGCATTGGACAGCAAAAAGCCTATCTAG
Protein Sequence
- >Tc01v2_g012340
MGSVALLDSNSSSGMKKNRKGKQRSAIPPTKKEIEADQKGKRRNVPQENSEPAGSLKRPKRAAACTDFKEKSVRISEKSSIIETKKDMLADDEIVAVGLTSEKDDGRPNRRLNDFVLHDSSGLPHPLEMLEVHDMFITGLILPLEESSDKVKEKEKSFRCEGFGRVESWAISGYEDGCPVIWLSTDVADYSCCKPASSYKKFYEHFFEKARACVEVYKKLSKSSGGNPDLSLDELLAGVVRSMTGSKCFSGGASIKDFVISQGEFIYNQLIGLDETSKKNDQVFAGLPVLAALRDESQKRENIGHERAAFLGGTLTIGKIFGEGDSKLDQSNSSAFAAEEDEDAKFARVLQEEEYWKSMKQKKNQGSASMSNKFYIKINEDEIANDYPLPAYYKTSNEETDELVVFDNDFDVCDPEDLPRSMLHNWSFYNSDSRLISLELLPMKPCADIDVTIFGSGVMTADDGSGFCLDNDPSHSTSGSSTALNVDGIPIYLSAIKEWMIEFGSSMIFISVRTDMAWYRLGKPSKQYLPWYEPVLKTARLAISIITLLKEQSRISRLSFNDVIRRVSEFKKDNCAFLSSDPAAVERYIVVHGQIILQLFAVFPDENIKKCAFVAGLTTKMEERHHTKWLVKKKKVVHNSEPNLNPRAAMVPVASKRKVMQATTTRLINRIWGEYYSNYLPEESKEETGSVEKEEEDENEEQEENEDDDAEEDKSILKETQKSPSVSRRSRRCSTKEEIRWDGEPVSKTSSDEPLYKQAIIYGEVIVVGSAVLVEVDSYELPAIYFVEYMFESSEGSKMFHGRMMQRGSETVLGNAANEREVFLTNDCGDFELEDVKQTVAVDIWLVPWGYQHRKDNANMAKSDKTKAEERKRKGLPMEYYCKSLYCPDRGAFFRLPFDSLGLGSGFCYSCKVKDAGKDKEMFKVNSLKTGFVYRGIEYSVHDYVYVSPHQFALERAENENFKGGRNIGLKPYVVCQVLEIIVLKELEKAGKESTQIKVRRFFRPEDISAEKAYSSDIREVYYSEETHMLSVEAIEGKCEVRKRNDLPEASAPAIFHDIFFCDRIYDPSKGSLKQLPTQIKLRYSTGIVDNDIAYQKKKGKSKEGENESEVKKQGEAAQENRLATLDIFAGCGGLSEGLHQSGASLTKWAIEYEEPAGDAFKLNHPGSLVFINNCNVILRAIMEKCGDADDCISTSEAAELAGSLDEKEINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLDMGYQVRFGILEAGAYGVSQSRKRAFIWAASPEETLPEWPEPMHVFAVPELKITLSNNLQYAAVRSTASGAPFRAITVRDTIGDLPAVGNGASKTNLEYQNEPISWFQKKIRGNMAVLTDHISKEMNELNLIRCQKIPKRPGADWHDLPDEKVKLSTGQVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPEQDRILTVRECARSQGFPDGYQFAGNIQHKHRQIGNAVPPPLAFALGRKLKEALDSKKPI