Information report for T459_34364
Gene Details
|
|
Functional Annotation
- Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.
Homologous
- Actinidia chinensis: CEY00_Acc03729
- Citrullus lanatus: Cla97C07G132430
- Cucumis melo: MELO3C025152
- Gossypium hirsutum: Gohir.D04G066700, Gohir.A05G316300
- Juglans regia: Jr12_24030
- Manihot esculenta: MANES_07G125200
- Nicotiana attenuata: A4A49_03444, A4A49_14853
- Populus trichocarpa: POPTR_010G192900v3
- Prunus avium: Pav_sc0002574.1_g060.1.mk
- Prunus persica: PRUPE_2G246000
- Rosa chinensis: RchiOBHm_Chr1g0369351
- Sesamum indicum: SIN_1008705
- Solanum lycopersicum: Solyc05g052620.3
- Vitis vinifera: VIT_13s0019g03380
Gene Resources
- Pfam: PF18511 PF18791
- UniProt: V5IY38
- EMBL: JQ085403
- AlphaFoldDB: V5IY38
- InterPro: IPR032675 , IPR041101 , IPR041567
- PANTHER: PTHR16134 , PTHR16134:SF119
- SUPFAM: SSF52047
- Gene3D: 1.20.1280.50 , 3.80.10.10
- SMR: V5IY38
Sequences
CDS Sequence
- >T459_34364
ATGGATGACCGTAGCTCAACGCGATTGAGTACGTCGACGAACGACACCGTATGGGAGTGCGTGATTCCGTATATACAGGAATCACGTGACAGAGACGCGGTGTCTTTGGTGTGCAAGAGGTGGTGGCAGATCGATTCGATAACGAGGAAGCATATAACTATGGCTTTGTGCTACACAGCGAAGCCGGAGCAGTTATCAAGGAGGTTTCCACATCTTGAATCGGTTAAACTTAAGGGGAAACCGAGAGCTGCTATGTTTAATTTGATACCTGAGGATTGGGGAGGGTATGTTACTCCATGGGTTGTGGAAATTACAAAGTCGTTTAGTCGATTGAAAGCTCTTCACTTTAGGAGGATGATTGTTGGGGATTCGGATCTCGAATTGCTTGCGATTCGTCGTGGTAAAGTTCTTCAGGTTTTGAAGCTTGATAAGTGTTCGGGATTCTCTACTGATGGTCTTCTGCATATTGCTCGTTCCTGCAGGAACTTAAGAACTTTGTTAATGGAAGAGAGTTCTATAATTGAGAAAGATGGAGAATGGGTACAGGAACTAGCATTGAACAACACAGTTCTTGAGAATTTGAACTTTTACATGACAGACCTTGTGCAAGTTAGGGCTGAAGATCTCGAATTGATAGCAAGAAATTGTAAATCTCTCGTCTCTATGAAAATTAGCGAGTTTGAAATTACGAAACTTCTTGGTTTCTTTAGAGCTGCAGCTGCATTGGAGGAGTTTGGTGGTGGCGCATTTAATGACCAACCAGAACATGTTGCTGAAAATGGCTATAATGAGCAAGCAGGAAAATATGCTGCAGTAGTGTTCCCTCCAAGATTATGCCAATTGGGCTTGACATACTTGGGGAAAAATGAGATGTCCATTCTCTTTCCCATCACATTTCGGGTGAAGAAATTGGATCTTCTTTATGCCCTTCTTGACACAGCAGCCCACTGTTTCTTACTGCAAAGGTGTCCCAACTTGGAAATTCTTGAGACAAGGAATGTTGTCGGGGATAGAGGATTGGAAGTGCTTGGCCAGTACTGTAAGAGGTTAAAGCGGCTCAGGATTGAGAGAGGAGCTGATGATCAGGAGATGGAGGATGAAGAAGGTGCGGTTACACACAGTGGATTGATTGATTTGGCAAAGGGATGCCTTGAACTAGAATACATGGCTGTCTACGTGTCAGATATTACTAATGAAGCCTTGGAAATTATTGGTAGATATCTGAAAAACCTGTCTGATTTTCGGCTGGTTTTGCTTGACCGAGAAGAAAGAATAACAGATCTGCCACTTGATAATGGTGTCCGTGCTTTACTAAGAGGTTGCCATAATCTTAGAAGGTTTGCCCTCTATGTCAGGCCTGGGGGACTTACTGATGTAGGTCTCAGTTATGTCGGGCAATACAGCCCAAATGTGAGATGGATGCTTCTGGGATATGTTGGTGAATCTGATCACGGCCTTCTAGAGTTCTCTAAAGGATGTCCTAGCCTGCAAAAACTAGAAGTGCGAGGCTGCTGTTTCAGTGAACGTGCATTAGCTTTGGCTGCCTTGCAGCTAAAATCGTTAAGGTACCTTTGGGTGCAGGGATACAGGGCATCCTCAGCTGGTCGCGATCTCTTAGCGATGGCTCGCCCATTCTGGAATATTGAGTTGATTCCTGCAAGACGAGTTGTTACTAACGATGGAAACAATGGAGAAGCTGTAGTGTCCGAGCATCCAGCCCATATACTTGCGTACTATTCACTCGCCGGGCAAAGAACAGATTTTCCAGACACTGTCAGGCCTTTGGACCCAACTTACCTTCTCGCTGAATAG
Protein Sequence
- >T459_34364
MDDRSSTRLSTSTNDTVWECVIPYIQESRDRDAVSLVCKRWWQIDSITRKHITMALCYTAKPEQLSRRFPHLESVKLKGKPRAAMFNLIPEDWGGYVTPWVVEITKSFSRLKALHFRRMIVGDSDLELLAIRRGKVLQVLKLDKCSGFSTDGLLHIARSCRNLRTLLMEESSIIEKDGEWVQELALNNTVLENLNFYMTDLVQVRAEDLELIARNCKSLVSMKISEFEITKLLGFFRAAAALEEFGGGAFNDQPEHVAENGYNEQAGKYAAVVFPPRLCQLGLTYLGKNEMSILFPITFRVKKLDLLYALLDTAAHCFLLQRCPNLEILETRNVVGDRGLEVLGQYCKRLKRLRIERGADDQEMEDEEGAVTHSGLIDLAKGCLELEYMAVYVSDITNEALEIIGRYLKNLSDFRLVLLDREERITDLPLDNGVRALLRGCHNLRRFALYVRPGGLTDVGLSYVGQYSPNVRWMLLGYVGESDHGLLEFSKGCPSLQKLEVRGCCFSERALALAALQLKSLRYLWVQGYRASSAGRDLLAMARPFWNIELIPARRVVTNDGNNGEAVVSEHPAHILAYYSLAGQRTDFPDTVRPLDPTYLLAE