Information report for T459_33913
Gene Details
|
|
Functional Annotation
- encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.
Homologous
- Actinidia chinensis: CEY00_Acc06634
- Gossypium hirsutum: Gohir.A11G275000, Gohir.A13G177400
- Manihot esculenta: MANES_08G108300
- Nicotiana attenuata: A4A49_40161, A4A49_35242
- Prunus avium: Pav_sc0001938.1_g060.1.mk
- Prunus persica: PRUPE_6G306600
- Solanum lycopersicum: Solyc01g101030.3, Solyc10g006770.3
- Solanum tuberosum: PGSC0003DMG400018250, PGSC0003DMG400025001
- Vitis vinifera: VIT_14s0060g00580
Gene Resources
- Pfam: PF14826 PF00557 PF08512 PF08644
- UniProt: A0A1U8GQH9
- RefSeq: XP_016573511.1
- EMBL: AYRZ02000090
- AlphaFoldDB: A0A1U8GQH9
- KEGG: cann:107871183
- OMA: MECESKK
- InterPro: IPR000994 , IPR011993 , IPR013719 , IPR013953 , IPR029148 , IPR029149 , IPR033825 , IPR036005 , IPR040258 , IPR048969
- PANTHER: PTHR13980 , PTHR13980:SF15
- SUPFAM: SSF55920
- Gene3D: 2.30.29.150 , 2.30.29.210 , 2.30.29.30 , 3.40.350.10 , 3.90.230.10
- OrthoDB: A0A1U8GQH9
- CDD: cd01091
- STRING: 4072.A0A1U8GQH9
Sequences
CDS Sequence
- >T459_33913
ATGCCCGAACAAAAACAAGGAAATGGTGCCACTGCAAATGGGAATGCGGCAGGTGGAAATGCTTATACAATTGACCTGCCTACTTTTAGTAGGCGGCTGAAAGACTTGTATTCACACTGGCGTGAACATAAAGATGAGTTTTGGGGTTCTTCTGATGTCCTTGCTATAGCTACCCCACCACCTTCAGAGGACCTGAGATACTTGAAATCCTCAGCCATAAATGTATGGTTACTTGGGTATGAGTTCCCTGAGACTATAATGGTCTTTGGGAACAAGCAGATACATTTTCTGTGCAGCCAAAAGAAAGCTTCATTGCTGGATGTTGTGAAATTGACTGCTAAAGAGGCTGTGGGAGTGGAAGTTGTCATGCATGTAAAGGCCAAAAGTGAGGATGGGACTACTAAAATGGACAACGTGATCCATGCTATTCGTGTGCAGTCAATATCAGGTGCTTATGATAACCCTGTTATTGGATATATTGCGCGAGAAGGTCCTGAAGGAAAACTCTTGGAGGCTTGGACTAAGAAGATTAAAGATTCTGGCCTTCAGCTTGGTGATATAACAAATGGACTTTCTGACCTTTTTGCTGTGAAGGACCAAAATGAGCTTGTTAACGTGAAGAAAGCTGCACATTTGACTGCTTCTGCTATGAAGAACTTTGTTGTTCCAAAACTTGAGAAAGTAATTGATGAGGAGAAGAAAGTAACTCATTCTTCGTTGATGGATGAAACAGAAAAGGCTATTCTGGAGCCTGCTAAAGTCAAGGTGAAGCTGAAAGCTGAGAATGTTGATATATGTTACCCTCCAATCTTTCAGAGTGGTGGTATTTTTGATCTCAGACCCAGTGCTACAAGCAACGATGACGGTCTGTATTATGATTCTGCCAGTGCCATCATATGTGCAATTGGTTCAAGATACAGCAGCTACTGTTCGAACCTTGCTAGAACATTTCTAATTGATTCCACTCAGATGCAGACCAAGGCTTATGAAGTGCTTCTTAAAGCCCAGGAGGCGGCAATAGGTGCATTGAAGCCTGGCAACAAGGTTAGTGCTGTTTATCAAGCAGCTCTTGCTGTGGTTGACAGGGAGACTCCTGAATTCGTTAGCAACATGACAAAATCTGCTGGGACAGGGATTGGTCTTGAGTTTCGAGAATCAGGGTTGATCCTTAATGCTAAGAATGATAAACTGTTGAGACCGGGAATGGTTTTCAATGTGTCACTTGGTTTCCACAATTTGCAGAATCAGACCAACAAAGAGAAGAGCCAGAATTTTTCTCTTTTGCTAGCAGATACTGTGATTGTTACAAAGAATGGTCATGATGTGATCACGCATTTGAGCTCCAAAGCTTTGAAGGATGTGGCCTATTCCTTCAATGAAGAAGAAGAAGAGGAGGAACTACAAGTGAAAGCAAAGTCCAATGGTAGGGAAACCATGTATTCCAAGGCAACACTTAGGTCTGACAATCATGAGATTTCAAGAGAAGAGAAGCGGAGGCTGCACCAGGAAGAACTTGCCCGTCAGAAGAATGAAGAGACTGCTCGACGTCTTGCTGGTGAAGAAACCTTAACTGGGAATAGCAGGAGTGCTAAGACTTCAACTGACGTTGTTGCCTATAAGAGTGTCAATGACCTACCACCACCCAGAGAGATGATTATTCAGGTTGACCAGAAGAACGAGGCCATCCTTTTACCAATATATGGTAATATGGTTCCTTTCCATGTGGCTACTGTTAAGACCGTTTCAAGCCAACAGGACTACATCCGAATCATATTTAATGTTCCTGGTGCCCCTTTCTCACCTATTGATGTGAAGAATCAAGGTGCCATCTACCTAAAAGAGGTTTCATATCGTTCCAAGGATCATAGGCACATAAGTGAAATGGTCCAGGTGATTAAAACACTTAGACGTAATTATATGGCAAGGGAGTCTGAGAGAGCCGAAAGAGCAACTCTAGTGACTCAGGAAAAACTTATCCTTGCAGGGAATAAATTCAAGCCAGTTAGGCTACCTGACTTATGGATCCGCCCTGTATTTGGTGGTCGAGCACGAAAGCTTAGTGGTACACTGGAAGCTCATGGCAATGGTTTCCGGTATTCGACCACCAGACAAGATGAACGTGTTGACATCATGTATGGCAATATCAAGCATGCGTTCTTCCAGCCATCAGAGAAGGAGATGGTTACCCTTCTTCACTTTCATCTGCACAACCACATAATGGTGGGGAAGAAGAAGACAAAGGATGTTCAGTTCTATGTTGAGGTAATGGATGTGGTCCAAACGCTTGGAGGTGGAAAGAGGTCTGCGTATGATCCAGATGAGATTGAGGAAGAACAGAGGGAAAGAGATCGGAAGAACAAAATCAACATGGACTTCCAGAGTTTTGTGAACCGGGTGAACGATATTTGGAGCCAGCCCCAGTTTAAGGGATTTGACCTGGAGTTTGATCAACCTCTGAGAGAACTTGGGTTCCATGGTGTGCCCTATAAATCATCAGCTTTCATTGTTCCATCCTCCAGCTGTTTGGTTGAGCTGGTAGAGACCCCATTCCTTGTGATAACTCTAAGTGAGATTGAGATTGTAAACTTGGAGAGAGTCGGATTTGGGCAGAAGAACTGTGATATGGCAATTGTTTTCAAGGACTTCAAGCGCGATGTCATGCGGATAGATTCAATCCCTATTTCATCCCTTGATGGCATCAAGGAATGGCTTGACACAACTGACATCAAGTATTATGAGAGCAAGGTGAATCTGAACTGGCGTCAAGTGCTGAAGACGATAACTGATGAACCACAGAAGTTTATTGATGATGGTGGTTGGGAATTTTTGAACTTGGAAGGTACTGACTCATCATCTGGAGATTCAGAGTCGGACCAAGGTTATGAACCTTCAGATGCTGAACCCGAGTCAGACTCTGATGATGAAGAGTCTGATAGTGAATCTCTTGTGGAGTCGGAAGATGACGAGGAAGAGGATGAAGATGAAGATTCGGAGGATGAAAAAGGTAAAACATGGGAAGAGCTGGAGAAAGAAGCAAGCCATGCAGACAGGGAGATTAATGAATCAGATAGTGAGGATGAGAAGAGGAGGAGAAAGAAGAATTTTGGCAAGTCGCGAGCTGGTCCTAGTTCTGCTGCCAGCAAGCGAATGAAGTTCAGGTAG
Protein Sequence
- >T459_33913
MPEQKQGNGATANGNAAGGNAYTIDLPTFSRRLKDLYSHWREHKDEFWGSSDVLAIATPPPSEDLRYLKSSAINVWLLGYEFPETIMVFGNKQIHFLCSQKKASLLDVVKLTAKEAVGVEVVMHVKAKSEDGTTKMDNVIHAIRVQSISGAYDNPVIGYIAREGPEGKLLEAWTKKIKDSGLQLGDITNGLSDLFAVKDQNELVNVKKAAHLTASAMKNFVVPKLEKVIDEEKKVTHSSLMDETEKAILEPAKVKVKLKAENVDICYPPIFQSGGIFDLRPSATSNDDGLYYDSASAIICAIGSRYSSYCSNLARTFLIDSTQMQTKAYEVLLKAQEAAIGALKPGNKVSAVYQAALAVVDRETPEFVSNMTKSAGTGIGLEFRESGLILNAKNDKLLRPGMVFNVSLGFHNLQNQTNKEKSQNFSLLLADTVIVTKNGHDVITHLSSKALKDVAYSFNEEEEEEELQVKAKSNGRETMYSKATLRSDNHEISREEKRRLHQEELARQKNEETARRLAGEETLTGNSRSAKTSTDVVAYKSVNDLPPPREMIIQVDQKNEAILLPIYGNMVPFHVATVKTVSSQQDYIRIIFNVPGAPFSPIDVKNQGAIYLKEVSYRSKDHRHISEMVQVIKTLRRNYMARESERAERATLVTQEKLILAGNKFKPVRLPDLWIRPVFGGRARKLSGTLEAHGNGFRYSTTRQDERVDIMYGNIKHAFFQPSEKEMVTLLHFHLHNHIMVGKKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQSFVNRVNDIWSQPQFKGFDLEFDQPLRELGFHGVPYKSSAFIVPSSSCLVELVETPFLVITLSEIEIVNLERVGFGQKNCDMAIVFKDFKRDVMRIDSIPISSLDGIKEWLDTTDIKYYESKVNLNWRQVLKTITDEPQKFIDDGGWEFLNLEGTDSSSGDSESDQGYEPSDAEPESDSDDEESDSESLVESEDDEEEDEDEDSEDEKGKTWEELEKEASHADREINESDSEDEKRRRKKNFGKSRAGPSSAASKRMKFR