Information report for Sspon.01G0029520-3C
Gene Details
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Functional Annotation
- Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB.
Homologous
- Panicum virgatum: Pavir.9NG081800.3.p, Pavir.9NG081800.2.p, Pavir.9NG081800.1.p, Pavir.6NG235200.1.p
- Setaria italica: Seita.9G067200.3.p, Seita.9G067200.2.p, Seita.9G067200.1.p
- Setaria viridis: Sevir.3G358600.1.p
- Zea mays: GRMZM2G065374_P01, GRMZM2G065374, GRMZM2G016756_P01
Gene Resources
- Pfam: PF00010
Sequences
CDS Sequence
- >Sspon.01G0029520-3C
ATGGACGGCAATGCGAGGTCGGCGGCGGCGAATCAGAAGAAGCTCATCGTCGCGGACGACGACCTCATCGAGCTTCTGTGGCACAACGGGAGCGTCGTCGCGCAGCCCCAGGCGCACCACAGGCCGGCGCCGCCCTCCGACCGCGACCGCCCGGGCACCAGCGGCCTCACCGGCGAGGAGACCGCCGCGTGGTTCCCGGACAGCCTCGACGACGCGCTCGAGAAGGACCTGTACACGCAGCTCTGGTACAGCACCATCGCCGACGCCGCCCCGCAACCCGAGGGCACGCTCCTGGGCCCTACCTCGCAGCCTTCGCCGCCGCTGCCGCCGGTTGCGAGCAGCGGCGTCGAGTCGAGCTGGGCCGGCGACATCTGCTCCACCTTCTGCGGCAGCAACCAGGTGCCCAGGTCGCCGGCAGGGACCAGCGGGAAGGACGTGGCATTGCAGTCGGAGGGGCCAAGCGGTGCCGGCGCGCACGACGGCACGTCGTCGTCCGGTGGGTCTGGAAGCAACTATGGGGGATCCGGGCTGCCCAGTCACAGCGTCCATGTCCACAAGAGGAAGGGGAGGTGTAGAGACGACTCAGATAGTCCCAGTGAGGATGCCGAGTGTGAGGAGGCAACTGAGGAGACCAAACCGTCGCGGCGACATGGGCCGAAACGTCGGACTCGTGCAGCTGAAGTTCATAATCTCTCAGAGAGGGTGAGATCAGAATCAGATTGTGCTAGCAAGGCAAAGAAAGCCTATTTTCAGAAAGGCAGGCAGCTTAGAAGAAGGGACCGGATCAATGAAAAGATGCGTGCGTTGCAAGAGCTGATCCCACACTGCAACAAGACTGACAAAGCGTCAATACTAGACGAGACGATTGAGTATCTCAAGTCCCTCCAAATGCAAGTTCAGTGCTACCTCAGCGCGGACGACGACCTCATCGAGCTTCTGTGGCACAACGGGAGCGTCGTCGCGCAGCCCCAGGCGCACCACAGGCCGGCGCCGCCCTCCGACCGCGACCGCCCGGGCACCAGCGGCCTCACCGGCGAGGAGACCGCCGCGTGGTTCCCGGACAGCCTCGACGACGCGCTCGAGAAGGACCTGTACACGCAGCTCTGGTACAGCACCATCGCCGACGCCGCCCCGCAACCCGAGGGCACGCTCCTGGGCCCTACCTCGCAGCCTTCGCCGCCGCTGCCGCCGGTTGCGAGCAGCGGCGTCGAGTCGAGCTGGGCCGGCGACATCTGCTCCACCTTCTGCGGCAGCAACCAGGTGCCCAGGTCGCCGGCAGGGACCAGCGGGAAGGACGTGGCATTGCAATCGGAGGGGCCAAGCGGTGCCGGCGCGCACGACGGCACGTCGTCGTCCGGTGGGTCTGGAAGCAACTATGGGGGATCCGGGCTGCCCAGTCACAGCGTCCATGTCCACAAGAGGAAGGGGAGGTGTAGAGACGACTCAGATAGTCCCAGTGAGGATGCCGAGTGTGAGGAGGCAACTGAGGAGACCAAACCGTCGCGGCGACATGGGCCGAAACGTCGGACTCGTGCAGCTGAAGTTCATAATCTCTCAGAGAGGAGAAGAAGGGACCGGATCAATGAAAAGATGCGTGCGTTGCAAGAGCTGATCCCACACTGCAACAAGACTGACAAAGCGTCAATACTAGACGAGACGATTGAGTATCTCAAGTCCCTCCAAATGCAAGTTCAGATCATGTGGATAACTTCTGGGATGGCGCCAATGATGTTTCCTGGTGCTCACCAATTCATGCCACCAATGGCTCTAGGCATGAATTCAGGTTGCATCCCGGCAGCACAAGGCCTAAGTCAGATGCCAAGACTACCATACATGAACCAACCCCTGCCAACTCATATCCCTCTGAACTCATCTCCAGCTATAAATCCAATGAATCCACTGAACGCTGCGAACCAGATGCAAAACAGTCACCTCAGGGAGGCAAGCAATCACTTCCTTCACCTAGATGGGCGAACAGCAGTGCTACCTCAGGTACCAGGACCCCATGTTTATGGACATCAAATAGCACAAGCCGAAGAACCCAATAGTATACTGGAAGTGACTGCTAGTACTGTTGTGCCAACTTCTACGGCAGGGCAACCACCTACTTTTGGAGATCAAGAAAGGGTCTTCTTTCTGGCAATCACTGCAAATACTGACATGATAAGGAGCAGGTTTGGTCTGCAGGAGATGAGCTCGCCACTCGCCAGTCAGTCCATGCATCTTCACACGACGTGGACTGTGGGCATGCTCCACGGCAACGGTTCAGCATCCTCCTGGCAATCTTGTGGCTCCCAGCAGCTGCGAGAATCTGTGTGGAGCAAGATGCCAGGCTCTCATCTTCAGCATGATGTTACAGCATTCAATTGTTTCACGGGAACATGTAGCGTG
Protein Sequence
- >Sspon.01G0029520-3C
MDGNARSAAANQKKLIVADDDLIELLWHNGSVVAQPQAHHRPAPPSDRDRPGTSGLTGEETAAWFPDSLDDALEKDLYTQLWYSTIADAAPQPEGTLLGPTSQPSPPLPPVASSGVESSWAGDICSTFCGSNQVPRSPAGTSGKDVALQSEGPSGAGAHDGTSSSGGSGSNYGGSGLPSHSVHVHKRKGRCRDDSDSPSEDAECEEATEETKPSRRHGPKRRTRAAEVHNLSERVRSESDCASKAKKAYFQKGRQLRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQCYLSADDDLIELLWHNGSVVAQPQAHHRPAPPSDRDRPGTSGLTGEETAAWFPDSLDDALEKDLYTQLWYSTIADAAPQPEGTLLGPTSQPSPPLPPVASSGVESSWAGDICSTFCGSNQVPRSPAGTSGKDVALQSEGPSGAGAHDGTSSSGGSGSNYGGSGLPSHSVHVHKRKGRCRDDSDSPSEDAECEEATEETKPSRRHGPKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIMWITSGMAPMMFPGAHQFMPPMALGMNSGCIPAAQGLSQMPRLPYMNQPLPTHIPLNSSPAINPMNPLNAANQMQNSHLREASNHFLHLDGRTAVLPQVPGPHVYGHQIAQAEEPNSILEVTASTVVPTSTAGQPPTFGDQERVFFLAITANTDMIRSRFGLQEMSSPLASQSMHLHTTWTVGMLHGNGSASSWQSCGSQQLRESVWSKMPGSHLQHDVTAFNCFTGTCSV