Information report for Sspon.01G0024810-1A
Gene Details
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Functional Annotation
- Encodes PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP), a homolog of human Paf1 Complex (Paf1C) subunit Parafibromin. Human Parafibromin assists in mediating output from the Wnt signaling pathway, and dysfunction of the encoding gene HRPT2 conditions specific cancer-related disease phenotypes. PHP resides in a ~670-kDa protein complex in nuclear extracts, and physically interacts with other known Paf1C-related proteins in vivo. Loss of PHP specifically conditioned accelerated phase transition from vegetative growth to flowering and resulted in misregulation of a very limited subset of genes that included the flowering repressor FLOWERING LOCUS C (FLC).
Homologous
- Beta vulgaris: BVRB_3g068190
- Capsicum annuum: T459_16702
- Glycine max: Glyma.11G008100
- Gossypium hirsutum: Gohir.D02G039900
- Juglans regia: Jr07_21290
- Lactuca sativa: gene-LSAT_6X103081
- Medicago truncatula: Medtr5g006960
- Musa acuminata: Ma08_g20590, Ma09_g10210
- Nicotiana attenuata: A4A49_34682
- Populus trichocarpa: POPTR_010G085500v3
- Sesamum indicum: SIN_1010010
- Solanum lycopersicum: Solyc06g054080.3
- Solanum tuberosum: PGSC0003DMG400016264
- Vitis vinifera: VIT_05s0020g03720
Sequences
CDS Sequence
- >Sspon.01G0024810-1A
CAGCCCAACCAAGTTACTGAGCTCAACCGAGGCAGATCCATTCCATCCATACAGCCAGCCAGGGCATACCGGCAAAACCCAAACCCAGGAGGCACACACAGCATCGCCGGCGGCGATGGATCCCCTCTCCGTGCTGCGCGACTACGCCGCCCGCAACGAGCTGGACAAGATCATCTTCTCCGGCGACGAGATCCACTTCGGCTCCGACTACACCTTCCCGGCCTCCACCCCCACCGCCTTCGCCTCCAAGCAGTCAGGCCGCCCTACCCGCTCTCCGCTGCCGTCTTCCTCGCGCAGCACCACGACCTCAAGCACACCGACTTCATCCAGGCCGCGCGCCTCCGCCGCATCCCGCCCGTCTCCCTCCCCGACCGCAAGACCTTCCTCGACTTCCTCCGCTTCGGCCACAACTCCCTCCCCTCCGCCGACCCGCTCCTCCCCTCCGCCTTCCAACCGCAGGAGCCCCACCTCCACCCGCCCTCGCCGCCGCCCGAGGACCCCGCGGCCGCCGAGGAGGCCACCACGGGGAAGCAAATCCGCGCGCTCGAGCGGCCCTTCAAGGACCGCAACGCGATCCTCGACGCCCGCGGCCGCGACTTCCTCGCCGTCTTCCAGGCCGCCGTGCGCCGCCAGGACGACCAACGCAAGGCCGGCGTCAAGGACGCGGCGCCCTCTTCCCGCCCCGACTCTGGCTCCGCCGCTGCAGCCCTGGCCAAGCCCAAGGTGCTGGACAGGGCCCTGGGCGACGGCGTCGTCCCCATCATCCTCGTGCCCAGCGCCTCGCAGACGCTGATTACGATCTACAATGTCAAGGAGTTCCTCGAGGACGGGGTGTTCGTGCCCAGCGAGGAGAGGATGCGGGCGACCAAAGGGGGGAAGCCGGAGAGCGTCACGGTGCAGAAGAAGCTGATTCGTACGGAGAGAGCTGGCGGCGCTGGGGGTGCCGTCTCCTTCGAGGTTAGGGACAAGCCGGCTTCGCTCAAGTCAGACGATTGGGGGCGGGTGGTGGCCGTGTTTGTGCTCGGCAAGGAGTGGCAGTTCAAGGACTGGCCCTTCAAGGACCATGTAGAGATCTTTAACAGAGTTATTGGTTTCTATGTGCGCTTCGAAGATGATAGTGTGGAGGCAGCCAAGGTGGTGAAACAGTGGAACGTGAAAATCATATCTCACGCGTCGGCGGGCAGGTCGCACGAGGTGGGCAGCAGCTGGCCGAGCGCGGACCCGAGCTGCTGGACGGGCCCCGACACCATCGCGGCGCACAGGCACGGCGCCTGCGACTGGAACATGGCCCGTATCTGGGCGCAGCACTCCGTGGGCGGCGACGTCGAGTTGCCCATGAGCTTCCACTTTTCGCAGGACAAACGCGTTGCTTTCTCCAGCGACTTTGGAGCCCCACCTCCACCCGCCCTCGCCGCCGCCGAGGACCCCGCGGCCGCCGAGGAGGCCACCACGGGGAAGCAAATCCGCGCGCTCGAGCGGCCCTTCAAGGACCGCAACGCGATCCTCGACGCCCGCGGCCGCGACTTCCTCGCCGTCTTCCAGGCCGCCGTGCGCCGCCAGGACGAGCAGCGCAAGGCCGGCGGCAAGGACGCGGCGCCCTCTTCCCGCCCCGACTCTGGCTCCGCCGCTGCAGCCCTGGCCAAGCCCAAGGTGCTGGACAGGGCCCTGGGCGACGGCGTCGTCCCCATCATCCTCGTGCCCAGCGCCTCGCAGACGCTGATTACGATCTACAATGTCAAGGAGTTCCTCGAGGACGGGGTGTTCGTGCCCAGCGAGGAGAGGATGCGGGCGACCAAAGGGGGGAAGCCGGAGAGCGTCACGGTGCAGAAGAAGCTGATTCGTACGGAGAGAGCTGGCGGCGCTGGGGGTGCCGTCTCCTTCGAGGTTAGGGACAAGCCGGCTTCGCTCAAGTCAGACGATTGGGGGCGGGTGGTGGCCGTGTTTGTGCTCGGCAAGGAGTGGCAGTTCAAGGACTGGCCCTTCAAGGACCATGTAGAGATCTTTAACAGAGTTATTGGTTTCTATGTGCGCTTCGAAGATGATAGTGTGGAGGCAGCCAAGGTGGTGAAACAGTGGAACGTGAAAATCATATCTATAAGCAAAAATAAAAGGCATCAAGACAGAACAGCTGCTCTTGAAGTATGGGAGCGCTTGGAGGAATTTATGCGGGCGCGTACATAA
Protein Sequence
- >Sspon.01G0024810-1A
QPNQVTELNRGRSIPSIQPARAYRQNPNPGGTHSIAGGDGSPLRAARLRRPQRAGQDHLLRRRDPLRLRLHLPGLHPHRLRLQAVRPPYPLSAAVFLAQHHDLKHTDFIQAARLRRIPPVSLPDRKTFLDFLRFGHNSLPSADPLLPSAFQPQEPHLHPPSPPPEDPAAAEEATTGKQIRALERPFKDRNAILDARGRDFLAVFQAAVRRQDDQRKAGVKDAAPSSRPDSGSAAAALAKPKVLDRALGDGVVPIILVPSASQTLITIYNVKEFLEDGVFVPSEERMRATKGGKPESVTVQKKLIRTERAGGAGGAVSFEVRDKPASLKSDDWGRVVAVFVLGKEWQFKDWPFKDHVEIFNRVIGFYVRFEDDSVEAAKVVKQWNVKIISHASAGRSHEVGSSWPSADPSCWTGPDTIAAHRHGACDWNMARIWAQHSVGGDVELPMSFHFSQDKRVAFSSDFGAPPPPALAAAEDPAAAEEATTGKQIRALERPFKDRNAILDARGRDFLAVFQAAVRRQDEQRKAGGKDAAPSSRPDSGSAAAALAKPKVLDRALGDGVVPIILVPSASQTLITIYNVKEFLEDGVFVPSEERMRATKGGKPESVTVQKKLIRTERAGGAGGAVSFEVRDKPASLKSDDWGRVVAVFVLGKEWQFKDWPFKDHVEIFNRVIGFYVRFEDDSVEAAKVVKQWNVKIISISKNKRHQDRTAALEVWERLEEFMRART