Information report for SORBI_3008G098300
Gene Details
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Functional Annotation
- Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.
Homologous
- Arabidopsis thaliana: AT3G49600
- Brachypodium distachyon: BRADI_1g07717v3
- Brassica rapa: Bra019603
- Capsicum annuum: T459_08555
- Lactuca sativa: gene-LSAT_5X59280
- Musa acuminata: Ma11_g07560
- Nicotiana attenuata: A4A49_14084
- Setaria italica: SETIT_021051mg
- Setaria viridis: SEVIR_3G379000v2
- Zea mays: GRMZM2G154621, GRMZM2G376074
Gene Resources
- Pfam: PF00443
- UniProt: A0A1Z5R6Q5
- EMBL: CM000767
- AlphaFoldDB: A0A1Z5R6Q5
- OMA: GSCEEMP
- InterPro: IPR000626 , IPR001394 , IPR006615 , IPR018200 , IPR028889 , IPR029071 , IPR033841 , IPR035927 , IPR038765 , IPR044743 , IPR050164
- PANTHER: PTHR24006 , PTHR24006:SF722
- SUPFAM: SSF143791 , SSF54001 , SSF54236
- PROSITE: PS00972 , PS00973 , PS50053 , PS50235 , PS51283
- Gene3D: 3.10.20.90 , 3.30.2230.10 , 3.90.70.10
- CDD: cd01795 , cd02668
- eggNOG: KOG1863
- STRING: 4558.A0A1Z5R6Q5
Sequences
CDS Sequence
- >SORBI_3008G098300
ATGAATAGGCCCAACACTCGCCACAAGAACAAGAGGCCGCGGTCTGATGAATCCAATAGCCCGTCTGCGGCTGTTTTCAAGAAGATACACTCTGATGGCGATATCTCAAAGAGCGATATCCGCCAGCTTTACATGGTGTGGAAACTGCCTTGCTATGGCTGCCATGGGAATACCAAGGACTCTCCAAATTGTTTCTGTGGGTTGATTCCTGCTACCAATGGGGTTCGCAAAACCGGCCTCTGGCAGAAAATGCAGGAAATTATCCGCGCTCTTGGCTCTAATCCATCCAGGGACCTCCGTGATTCCACTGATACGCCTGCTGGATTGACTAACCTGGGTGCAACCTGTTATGCAAATAGCATACTTCAGTGCCTTTACATGAATATATCCTTCCGCACAGGAATTTTCTCTTTAGAGCTGGAAGTTTTGAAGAAGCATCCTGTCCTGGATCAGTTGTCACGGCTGTTTGCACAGCTACACTCTAGCAAAATGGCTTTCATTGATTCCGCACCTTTTATTAAAGCGCTGGAATTAGACAATGGTGTCCAACAGGACAGCCATGAATTTCTCACCTTGTTCCTGTCTCTGCTTGAGCAATCGTTAAGTCATTCCAAGGTTCCTGGAGCTAGAACAATTGTGCAACATCTGTTTTGCGGCCGTGTATCACACGTGACAAGGTGCTCATCATGTGGAAAGGATTCTGCAGCATCTTCAAAAATGGAAGACTTTTACGAGCTGGAGTTGAATATTAAAGGTTTAAATACTTTAGAAGAAAGTCTTAATGACTACTTTAGTGAAGAAGCACTGGATGGGGAGAACCAATACTTTTGTGAGTCATGTCAGAAAAGGGTAGATGCCACTCGCTGCATAAAACTTCGATCACTTCCTCCGGTTGTCAACTTTCAGCTAAAGCGCTATGTATTCCTCCCGAAGACAACAACAAAGAAAAAGATTTCTTCAACGTTCAGTTTCCCGAGACAGCTTGATTTGGGAAAACGGTTGTCAAACCCTTCATCTAGTTGTACTTATGACCTGGCTGCTATTTTAGTTCACAAGGGTACTGGTGCTAATAGTGGACACTATGTTGCACACATAAAAGATGAAAGCAATGGGCAGTGGTGGGAGTTTGATGATGAGACTGTATCCAAACTCGGTGATGACAATGCCACAGAAAACAATAAAATTGTGGAAATAAATAATGATTCACTTCCACAGCATCTTCTTGATGAAATTAATGAACTAAATGTATCATATGTGAAATCGTGTGAGGAATACCAAAGCAAGAAGGACAGTCATTTGAGATATGTAAACGAGAGGCGTCAAGAAGTAAAATCTGTTCTGGCAGCAGCACCTGCTGATCCAGAGGATGATTCATATTTTTGGATCTCAACAGACTGGCTTCGGCAATGGGCAGATAACACTACTCCCCCCTCTTCCATTGACAATGGTCCAATTCAATGCAAACATGGAAAGGTTCCAGCATCTAAAGTCACATCAATGAAGCGACTATCATCTGTAGCTTGGGAAAAACTATATTTGAAGTATGGAGGGGGACCGACATTGAGCAGTGATGATTTTTGTATGGAGTGTCTTAAAGATGGGGCGAAAAATGCAGTATCTGCTGATGTCTACCGTGAACGAAAAGCATCATTGAAAAACCTTGCAGAAGCAGCACTTTCTGGTAATTGTCCAGATGGTCCTTCTTACTTTATCTCAAAGACATGGTTGACTCATTGGCTGCGGAGGAAAAATTCAGATATCCCTTCGGATGCGGATAATGGACCAACAAGTGCTTTAAGATGTTGCCATGGGGATCTTCTGCCGGAGCATGCTGCAGGAGCAAAGCGAGTATCCGTACCAGAGAACCTCTGGTTATTTCTCTATGAAACAATGAACGAGAAGAAGGCTGATGATATTGTGACTTTTCCATCAGATTGTCAACCATGTGAAATTTGCAGTCAGGAATTGTCTGATGTTGCATCTGTGGAGGGTAATCTTAGAGCAGTGAAAGTAAAGCAACGACAGAAACATGAAAAGTTGGCAACTGGGAAAAGCTTTACACTTCATCCTGGTCAAAAATATTTTTTGGTTCCTTCATCATGGTTGTCAGAATGGAGAGCTTATATTACAGCCACTGGGAAAAATATTTCTTCGTTACCAGAACCTCATAGTTTGGAAGAAGTTGTCAGTTCACTTATATGTGAAAAGCATTCAAGATTGCTGCAAAGGCCTTTGGATCTTGTCTGTAAGCGTGGGAGCATCACTCAGAAAATGTCAAATACTGATGGGTTAACAGTAATCCCAGAGTATGATTGGAAATTATTCTCCGAGGAGTGGAGTGCCAGACCTGAAAAAGGTATATCTGCTGAAATTGCTTTCAGCAAGAGCTCTCAAGACAAATTGCATGGACCATCTGAAGCAACGGCAATTGTGGATGGAGATCGAGGCAAGTCTCTTGATGACACAAATGATGATTTGGGAGCCAGTGAACCCTATATCAGAACTGACCCTGAGGTTTGTGAAGAATGTATTGGAGAAAGAGAGAGCTGTGCATTGGTGGAGAAACTTAATTATCAGAATGAAGACATCCATGTTTATTTTGTCCGTGGGAAAGAAGCACCAAAGTCTATTAAAGAAGCATGTAGTAAAGCTGCTGTTGTAGCAGATCGTCGGACTTCAAAGCGTTCCCGGAGAGCAAGCTCTGGAAATTCAATTAGTTTGAAAGTCTCTGGTTCTACATCCATCTATCAGTTGAAACTCATGATATGGGAATCTTTAGGGATTGTTAAGGAGAACCAGAAACTTCACAAAGGCTCTGATGAAATTGAAGATGACCTTGCTACTCTTGCTGATAAGGGTGTTTTTCCTGGGGATATTCTTTGGGTCAGAGACTCTGAAATCTATGAGAATCGTGACATAGCAGATGAAATTTCAGAACAGAAGGCTGATATGCTACAGGTTGAGGAAGGGTTTCGAGGAACTCTGTTGACATCAGGTGTCTCTGTTCAGTTTTGTCAGGACATAACATTTAGTGAATGA
Protein Sequence
- >SORBI_3008G098300
MNRPNTRHKNKRPRSDESNSPSAAVFKKIHSDGDISKSDIRQLYMVWKLPCYGCHGNTKDSPNCFCGLIPATNGVRKTGLWQKMQEIIRALGSNPSRDLRDSTDTPAGLTNLGATCYANSILQCLYMNISFRTGIFSLELEVLKKHPVLDQLSRLFAQLHSSKMAFIDSAPFIKALELDNGVQQDSHEFLTLFLSLLEQSLSHSKVPGARTIVQHLFCGRVSHVTRCSSCGKDSAASSKMEDFYELELNIKGLNTLEESLNDYFSEEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRYVFLPKTTTKKKISSTFSFPRQLDLGKRLSNPSSSCTYDLAAILVHKGTGANSGHYVAHIKDESNGQWWEFDDETVSKLGDDNATENNKIVEINNDSLPQHLLDEINELNVSYVKSCEEYQSKKDSHLRYVNERRQEVKSVLAAAPADPEDDSYFWISTDWLRQWADNTTPPSSIDNGPIQCKHGKVPASKVTSMKRLSSVAWEKLYLKYGGGPTLSSDDFCMECLKDGAKNAVSADVYRERKASLKNLAEAALSGNCPDGPSYFISKTWLTHWLRRKNSDIPSDADNGPTSALRCCHGDLLPEHAAGAKRVSVPENLWLFLYETMNEKKADDIVTFPSDCQPCEICSQELSDVASVEGNLRAVKVKQRQKHEKLATGKSFTLHPGQKYFLVPSSWLSEWRAYITATGKNISSLPEPHSLEEVVSSLICEKHSRLLQRPLDLVCKRGSITQKMSNTDGLTVIPEYDWKLFSEEWSARPEKGISAEIAFSKSSQDKLHGPSEATAIVDGDRGKSLDDTNDDLGASEPYIRTDPEVCEECIGERESCALVEKLNYQNEDIHVYFVRGKEAPKSIKEACSKAAVVADRRTSKRSRRASSGNSISLKVSGSTSIYQLKLMIWESLGIVKENQKLHKGSDEIEDDLATLADKGVFPGDILWVRDSEIYENRDIADEISEQKADMLQVEEGFRGTLLTSGVSVQFCQDITFSE