Information report for SORBI_3008G011100
Gene Details
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Functional Annotation
- Encodes a protein with similarity to mammalian nucleoporin Nup98.Its expression is upregulated in mutants that are NUP deficient. Nucleoportin which redundantly inhibits flowering together with Nup98a through multiple pathways including clock, photoperiod, and age pathways. Gates flowering in a CONSTANS (CO)-independent mode and bypasses the CO checkpoint in photoperiodic signaling and integrated signals from multiple pathways to directly target FLOWERING LOCUS T (FT) for flowering control.
Homologous
- Hordeum vulgare: HORVU3Hr1G034780
- Saccharum spontaneum: Sspon.05G0008570-2D, Sspon.08G0022670-3D
- Setaria italica: SETIT_028858mg, SETIT_025940mg, SETIT_009305mg
- Setaria viridis: SEVIR_8G000800v2, SEVIR_2G457500v2, SEVIR_7G340565v2
- Triticum aestivum: TraesCS3A02G172200
Gene Resources
- Pfam: PF04096
- UniProt: A0A1Z5R4C1
- EMBL: CM000767
- AlphaFoldDB: A0A1Z5R4C1
- InterPro: IPR007230 , IPR036903 , IPR037665
- PANTHER: PTHR23198 , PTHR23198:SF6
- SUPFAM: SSF82215
- PROSITE: PS51434
- Gene3D: 1.10.10.2360 , 3.30.1610.10
- STRING: 4558.A0A1Z5R4C1
Sequences
CDS Sequence
- >SORBI_3008G011100
ATGTTCGGCTCCACCAACCCATTCGGGCAGTCGTCCACCAACGCATTTGGCCAGACCTCGTTTGGAACTCCGCAGGGATTCGGCCAGTCTTCCACTGCTGCCAACAATCCCTTTGCCCCAAAACCGTTTGGCAGCCCGACCACTACTTTTGGGGCACAGACTGGAAGCTCACTCTTTGCAACTACATCTACCGGTGCCTTTGGCCAGCAGCAATCCACTCCCGCATTTGGTACAACATCCACTGGTGCCTTTGGCCAGCAGCAATCCACTCCCACATTTGGCACTCCATCCTCCTCTCCGTTCGGGAGCTCTACACCAGCCTTCGGTGCATCCCCCACTCCTGCCTTTGGTGCGACATCATCTGGATCTTTGTTTGGACAGAAGCCAAGTTTTGGGGGTTTTGGATCATCTCCTAGCCAGCCAAGTCCTTTTGGTAGCACGTTCCAGCAAACACAACCAACATTTGGCAGCACCACTTTTGGTGCATCAACTACGCCGGCATTTGGTACGACGACTACGCCGGCATTTGGCACCACAACTACACCGGCTTTCGGTGCCACGACTACCCCAGCATTTGGTTCAACATCAACGTCTTTATTTGGTGCTTCTAGCACCCCAGCATTTGGTTCTACTGCCTTTGGTACATCTGCTACTGGTTTTGGAACTTCAGGGACCACAGCATTTGGTGTGAATAGTACTACTCAGGGTTTTGGATCTTCAAGCACAAGCGCCTTCAGTTTTGGCTCTTCACCATCTTTTGGACAAACAACAGTTTCCTCTGGTAGCACTCCCTTTGGAGCAACTCCATCGCCTTTTGGTGCACCAGCTCCTGCATTTGGCTCACAGACAGCAGCACCAGCTTTTGGGCAACCACAATTTGCTAATCAAGCTGGAGGAACCAGAATAAAACCTTATGCTCAAACACCAGATGTTGACAGTGCTACCAGTGGTACTCAGCCTGCTGCAAAACTTGATTCCATCTCAGCGATGCCTGAATACAAAGACAAGAGTCACGAAGAATTGAGGTGGGAAGACTATCAGCGTGGAGACAAGGGTGGACCAAACCCTTCTGGAACTCCAGCAGCGGCACCTAGCTTTCCATCATCGCAACAGAATGCTTTTGCTCCAACAAGCAATCCATTTAACCCGCCTGCGACAAACACATTTTCAACAATCAATCCATTTGCTCCTAAGCCTGCTCCAACTAGTACTTCACCATTCAACACCTCATTTAACAATGCATCTTCGAGCCCATTCACATCATCCACTAGTACCACAATGTTTGGGCAAACAGGTGTTTCTACATTTCCAGCAAGTACTTCGCCATCATTATTTGGAAATACCAATACTGCTTCTGGTACATCGTCCTTATTTGGTACATCAATGACGAATAATCCAAGTCCATTCGGCACTGGCTCATCATTAGCTAACACTCAATCAGCCCCACTATTTTCCTCATCATTTGCTCAACCACTATCAAGTACACCGGCTTTCTCCTCTGGGAGCCTATTCGGTTCAACTAATCCTGGCAATCTGTTTAGCAGCAGCGGGCCTTCACTTTTTTCAACACCAACATTTCAGCCATCTGCCGCTGCTCAATCTTCAAACATGTTCTCCTTCCAACCTCCGATTCAACCAGCAGTTTCTACAGGTGGATTCCCTGGTTTTTCCAGCACTACGAATCAGGCCTTGATTGGACAGCCAACTAGCCAGTCCAGTATGGTCATGCAGCCTGCTCCTATTTCAAATCCATTTGGGATGCTTCCAGCAATGCCTCAAATGTCTATTGGAAATGGTGGATCTTCACCATCAGTTCAATATGGGATATCAAGTTTGCCGGTTGCTGAGAAGCCTCTTCAAAGTAGAGCATTGTCCATGGCGGTTCCTAGGCATTTGTCACAGAGAAGGATAAAACTGCTGCCGAGAAAATATAATACAATATCTGATGGCAAGGTTCCATTCTTTGCTGATGATGAAGAATCTCCAACACCGAAGGCAGATGCTTTTTTCATCCCTAGAGAGAACCCAAGGAATCTGGTAATTCGTCCAATTGAGCAGTGGCCTTCGCGGAGAGAAACTGATCGGCAGTCAACTTTGAAGAATGCTACTGATTTGAATAAATATGAAGATTACTTCACAGAGCCTAGTATAGAGGAGCTTGCAGCCAAAGAACGTGCGGAGGCAGGCTACTGCGGTTCGGTGAGGGACTTTGTTGTGGGGCGACATGGCTATGGCAGCATCAAGTTTCTGGGAGTGACGGACGTGAGGTGCCTGGATCTGGAGTCAATAGTGGAGTTCAACAACCGGGAGGTGATTGTGTACAAGGACGACAGCAAGAAGCCCCCTGTTGGTGAGGGGCTGAACAAGGCTGCGGAGGTGACTCTACTGAACATCAAGTGCATAAACAAGAAGACTGGGGAGCAGTACTGCGAGGGGGCAAGGGTGGAGAGGTACAGGGAGATGCTGGTGAAGAAGGCGGAGGAGCAGGGCGCGGAGTTTGTGTCCTTTGACGCTGCCAAGGGAGAGTGGAAGTTCAGGGTGAAGCACTTCAGCGCCTATGGGCTTTGGTGA
Protein Sequence
- >SORBI_3008G011100
MFGSTNPFGQSSTNAFGQTSFGTPQGFGQSSTAANNPFAPKPFGSPTTTFGAQTGSSLFATTSTGAFGQQQSTPAFGTTSTGAFGQQQSTPTFGTPSSSPFGSSTPAFGASPTPAFGATSSGSLFGQKPSFGGFGSSPSQPSPFGSTFQQTQPTFGSTTFGASTTPAFGTTTTPAFGTTTTPAFGATTTPAFGSTSTSLFGASSTPAFGSTAFGTSATGFGTSGTTAFGVNSTTQGFGSSSTSAFSFGSSPSFGQTTVSSGSTPFGATPSPFGAPAPAFGSQTAAPAFGQPQFANQAGGTRIKPYAQTPDVDSATSGTQPAAKLDSISAMPEYKDKSHEELRWEDYQRGDKGGPNPSGTPAAAPSFPSSQQNAFAPTSNPFNPPATNTFSTINPFAPKPAPTSTSPFNTSFNNASSSPFTSSTSTTMFGQTGVSTFPASTSPSLFGNTNTASGTSSLFGTSMTNNPSPFGTGSSLANTQSAPLFSSSFAQPLSSTPAFSSGSLFGSTNPGNLFSSSGPSLFSTPTFQPSAAAQSSNMFSFQPPIQPAVSTGGFPGFSSTTNQALIGQPTSQSSMVMQPAPISNPFGMLPAMPQMSIGNGGSSPSVQYGISSLPVAEKPLQSRALSMAVPRHLSQRRIKLLPRKYNTISDGKVPFFADDEESPTPKADAFFIPRENPRNLVIRPIEQWPSRRETDRQSTLKNATDLNKYEDYFTEPSIEELAAKERAEAGYCGSVRDFVVGRHGYGSIKFLGVTDVRCLDLESIVEFNNREVIVYKDDSKKPPVGEGLNKAAEVTLLNIKCINKKTGEQYCEGARVERYREMLVKKAEEQGAEFVSFDAAKGEWKFRVKHFSAYGLW