Information report for SORBI_3007G047400
Gene Details
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Functional Annotation
- LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1;late elongated hypocotyl and circadian clock associated-1-like protein 1, LATE ELONGATED HYPOCOTYL 1 gene a
Homologous
- Panicum virgatum: Pavir.6KG070500.1.p
- Saccharum spontaneum: Sspon.06G0010960-1A
- Setaria italica: Seita.6G055700.1.p, SETIT_013398mg
- Setaria viridis: Sevir.6G053100.1.p, SEVIR_6G053100v2
- Zea mays: GRMZM2G014902_P01, GRMZM2G014902, GRMZM2G474769
Gene Resources
- Pfam: PF00249
- UniProt: C5YHA4
- EMBL: CM000766
- AlphaFoldDB: C5YHA4
- KEGG: sbi:8080836
- OMA: SHYQMDR
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017884 , IPR017930
- PANTHER: PTHR12802 , PTHR12802:SF177
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51293 , PS51294
- Gene3D: 1.10.10.60
- OrthoDB: C5YHA4
- CDD: cd00167
- eggNOG: KOG0724
- STRING: 4558.C5YHA4
- HOGENOM: CLU_025358_0_0_1
Sequences
CDS Sequence
- >SORBI_3007G047400
ATGACCTCAACTCCAAGTGACAAAGCGAACAACTGTTGCACCTTTCCCTTCTATTTCTGTTTATTTTTGCCGGATTTGGAGATGGAGGTGAATTCCTCTGGTGAGGAAATGGTGGTCAAGGTAAGAAAGCCATACACAATCACAAAGCAGCGGGAGCGGTGGACAGAGGCTGAGCACAAACGGTTCCTTGAAGCCTTGAAACTTTATGGCAGAGCATGGCAGCGTATAGAAGAGCATGTTGGGACAAAGACGGCCGTGCAGATCAGAAGTCACGCTCAAAAGTTCTTCACCAAGTTGGAAAAGGAAGCTATGACCAATGGTACTTCTCCGGGGCAAGCCCTTGACATTGACATACCTCCACCACGGCCTAAAAGAAAGCCTAACAATCCATATCCTCGAAAAAGTGGTCTCAGCTCTGAGACACCAACCAAAGATTTTCCAAATGACAAGTCAGCAAAACCAAATATGCCCTTGAGCAATGGAAATGTACAAATGGCAGGTGATGCATCTCTTCAGAAATTTCAAAGGAAGGAGTTGTCTGAAAAAGGAAGTTGCTCAGAAGTTCTTAATCTCTTCCGTGATGCCCCATCTGCGTCATTTTCTTCAGTTAACAAAAGCTCTTCAAATCATGGTGCACCCAGGGGGGTCGAGGCAAGTAAAACAGAAATCCGAGATATGACCATCATGGAAAATAATTCTCTTAACCCCAACATGCAAGAGGATGTAAAGGAGATCAGCGATCATGAAATGGAAAGGCTTAATAGTATCCAAATCAGCTCTAAATGTGAACATTCTCACGAGGGATATTTGGATCTCTCAATGCAACAAATGAAGCTAAAGCCAAAATCTGTGGAGACAACATATGTGGACAAACAAACTGCAAGAGCTTCGCACTCCCTAGCGGAGAAAAATGGGACAGCTAGCATTCTGGTCACTGCAACTGAAGGAACTCATTCTGATCAAACAAGTGATCAAGTGGGAATCAATGGAAGCATTAACCCATGCATCCATCCAATGCTTTCTTCAGATCCAAAATTTGATAGCAGTGCCACACCACAGCATTTTCCTCATAATTATGCTGCCTTTGCTCCAATGATGCAGGGCAACTGCAACCAAGATACCTACAGGTCATTCGTCAATATGTCATCCACCTTCTCCAGCATGCTTGTTTCCACGTTGTTGTCAAACCCTGCCATCCATGCAGCTGCCAGGCTCGCAGCATCATACTGGCCAGCAGCTGAAGGTAACACACTTATCGATCCAAATCAAGAAAATCCTGCAGATGATGTTCAAGGAAGGAACATAGGCTCTCCTCCAAGCATGGCTTCTATTGTAGCAGCTACAGTTGCTGCAGCATCTGCATGGTGGGCAACACAAGGTCTTCTCCCTTTCTTCACTCCACCCATGGCTTTTCCATTTGTACCAGCTCCTAGTGCTGCCTTTCCCACAGTTGATGTTCCAAGACCTTCAGAGAAAGACAGAGATTTCCCAGTTGAAAATGCACAGAAGGAATGCCAAGAAGCTCAAAAACAGGGACAATTTGAAGGTTTAAGAGTTGCTGCTTCTTCAGTGTCTGATGGGAGTGGAAAAGGCGAGGTGTCTCTCCACACAGAGTTAAAGATATCTCCTGTCCAGAATGCTGATGCAACACCTACCACAGGAGCTGATACAAGTGATGCATTCAGGAATAAGAAAAAGCAGGATCGCTCTTCATGTGGTTCTAACACACCTTCAAGTAGTGATGTTGATGCAGACAATGTTCCTGAGAAGGAGGACAATGCTAATGAGAAGGTGAAGCAAGCCTCCTGCAGCAACTCTTCAGCTGGTGACACTAACCACCGCAGATTTAGAAGCAGTGGAAGCACTAGTGATTCATGGAAGGAGGTTTCTGAAGAGGGTCGTCTGGCTTTCGATGCGCTGTTCAGTAGAGAAAAGCTTCCGCAAAGCTTTTCTCCCCCACAAGCAGAAGACTCGAAGGAGGTTGCCAAGGAGGAAGAAAATGAAGTGACTACAGTGGCAGTTGACCTCAACAAGAACGCCACAAGCATTGATCATGACCTCGACACAATGGATGAGCCAAGGGCTTCCTTTCCCAATGAATTGTCGCACCTGAAGCTGAAATCGCGCCGAACAGGCTTCAAGCCATACAAGAGATGTTCTGTGGAAGCGAAGGAGAATAGGGTGCCGGCTAGTGACGAGGTTGGTACCAAGAGGATTCGTCTTGAGAGCGAAGCATCCACATAA
Protein Sequence
- >SORBI_3007G047400
MTSTPSDKANNCCTFPFYFCLFLPDLEMEVNSSGEEMVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQIRSHAQKFFTKLEKEAMTNGTSPGQALDIDIPPPRPKRKPNNPYPRKSGLSSETPTKDFPNDKSAKPNMPLSNGNVQMAGDASLQKFQRKELSEKGSCSEVLNLFRDAPSASFSSVNKSSSNHGAPRGVEASKTEIRDMTIMENNSLNPNMQEDVKEISDHEMERLNSIQISSKCEHSHEGYLDLSMQQMKLKPKSVETTYVDKQTARASHSLAEKNGTASILVTATEGTHSDQTSDQVGINGSINPCIHPMLSSDPKFDSSATPQHFPHNYAAFAPMMQGNCNQDTYRSFVNMSSTFSSMLVSTLLSNPAIHAAARLAASYWPAAEGNTLIDPNQENPADDVQGRNIGSPPSMASIVAATVAAASAWWATQGLLPFFTPPMAFPFVPAPSAAFPTVDVPRPSEKDRDFPVENAQKECQEAQKQGQFEGLRVAASSVSDGSGKGEVSLHTELKISPVQNADATPTTGADTSDAFRNKKKQDRSSCGSNTPSSSDVDADNVPEKEDNANEKVKQASCSNSSAGDTNHRRFRSSGSTSDSWKEVSEEGRLAFDALFSREKLPQSFSPPQAEDSKEVAKEEENEVTTVAVDLNKNATSIDHDLDTMDEPRASFPNELSHLKLKSRRTGFKPYKRCSVEAKENRVPASDEVGTKRIRLESEAST