Information report for SORBI_3007G036700
Gene Details
|
|
Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA.;Encodes a histone acetylase related to Arabidopsis FLOWERING LOCUS D
Homologous
- Brachypodium distachyon: BRADI_3g14870v3
- Setaria viridis: SEVIR_6G064400v2
- Triticum aestivum: TraesCS7B02G206700
- Zea mays: GRMZM2G149786
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: C5YN37
- EMBL: CM000766
- AlphaFoldDB: C5YN37
- OMA: VTHWERE
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF373
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: C5YN37
- eggNOG: KOG0029
- STRING: 4558.C5YN37
- HOGENOM: CLU_004498_5_0_1
Sequences
CDS Sequence
- >SORBI_3007G036700
ATGTCGTCGTCGTCGCCGCCTCGCAGGCCGCAGCGCCGCGCGGCGTCGACGCGCCCTCCGTCGTACGACGAGTCCCTCCTCGACGCCGAGCTGGAGGGCTTGCTCGGCGACGCCGCCTCGCGCCGCGTGCGGCGGCTGCGCCGGCTGTCCGCGGAGGAGCGGCAGCGGGAGACGGAGACGGAGGCGCTCATCGCGCTCTCTCTGGGTTTCCCCATCGACGAGCTGCTCCCGGAGGAGCGGCCCCTCCTCCCGCCCCACATCGCCAACGCGCCCAACGACTACATCGTCGTCCGCAACCACATCCTCGCGTCCTGGCGCGCCGACCCGCGCGCGCCGCTGCCGCTCGGCTGCGTCCTCGAGACCGTCGCCTCCTCCTACGACCGCCTCGTCGCCGCGGCTTACGGGTACCTCGCCCGCGCGGGCCACATCAACTTCGGCGTCTCCGCCGCCTTCCCCGCCGCGCCGCCCCCGGACGCCGCCACCCAGGGCGCCGCGGCCGTCCTCGTCGTCGGCGCGGGGCTCGCGGGTCTCGCCGCCGCGCGCCAGCTCCTCCGCTTCGGTCTCCGGGTGCTCGTCCTTGAGGGCCGCTCGCGCCCCGGCGGCCGCGTCTACACGGCCCGGCTAGGTGAGGATAAGGCCGCCGTCGAGCTCGGCGGCAGCGTTATCACTGGTATCCACGCCAACCCGCTTGGCGTGCTCGCGCGGCAGCTTGGTCTTCCGCTGCATAAGGTGCGGGACCGCTGCCCGCTCTACTACCCAGATGGCCGGATTGTAGAGACTAGGCTGGATAGGACCATTGATTTGGTGTTCAACACGCTTCTCGACCACGCCACCAAGGTTCGGGAGTCTCTTAATGAAGCTGCAGAGAGGATTTCGTTGGAAGAAGCCATAGAGAAACTCAGGAGACTCTACCATGTGGCCAGAACGGATGAGGAGCAGATGGTTTTGAATTGGCATTTTGCAAATTTGGAATTCTCCAATGCCGGCTGCCTATCAGAGCTTTCACTCGCGCACTGGGACCAGGACGATCCTTATGAGATGGGGGGAGATCATTGTTTCTTAGCTGGAGGCAATTCTAGACTCATACATGCATTGTGTGATGGGGTGCCGGTACTCTATGAGAAGAAAGTGTCGCGAATCGAGTATGGAGTGGATGGGGTTAGTGTCACAGTGGAAGAAGGGCAGATTTTTCAAGCTGATATGGTTCTCTGCACCGTGCCCCTCGGGGTGCTTAAGAGTGGAAGCATCGTGTTTGACCCAGAGTTGCCTCAGGAGAAGCTTGGGGCAATACAGAGGTTGGGATTTGGGTTGTTGGACAAGGTTGCCATGGTGTTTCCCCATGTGTTTTGGGATGAGAATATTGACACGTTTGGGTGTTTGAATAAGGATAGCAGCAAGCGTGGGGAGTTCTTCCTCTTCTACAGCTACCACACTGTCTCTGGTGGAGCGGTTCTTATCGCACTTGTGGCAGGAGAGGCTGCTTTGGAGTTTGAAAAGGTTGATCCCATCGTTTCACTTCATCGAGTACTTGGCATTCTAAAAGGTATCTATGGCCCAAAAGGTGTTACTGTTCCTGATCCCATTCAATCTGTTTGCACGAGATGGGGCAGTGATCCTTTTTGCTCAGGTTCATACTCACACGTCAGAGTTGGGTCTTCTGGTGCTGACTACGACATTCTTGCTGAGAGTGTGAATGACCGACTCTTTTTCGCTGGAGAAGCTACGAATCGCGCATACCCTGCAACCATGCATGGGGCCTTATTGAGTGGGTTAAGAGAAGCTTCCAAAATTCATCGTGCCTCAGAAAGCTTAGTGAATTCTGACCAGAAGAAGAATTCATTGCCTAAAAGGCTCAAACCACCCAATGGTGCCCTTTTGGATCTGTTCTTGGAGCCAGACCTAGAATTCGGGAGATTCTCATTCGTGTTCTCCTCATTGACACCTGATGATCCAGAGGCTACAGGGATACTTCGGTTTTCACTTGACAAGCGTTTCTTTCTGCAGCCCAATAATCCGGAGTTAGATGGGGATCAAAAGGACTACAGCTCTGCATCTGGGGCCTTCCATTTGTATGCCACTGTCTCTCGAGAGCAGGCAGATCAGCTACAGAAGTCAAGCGAAGATGATAGAACTAGGCTAGGAGTGTTATGCAAGGATTTTAGTGTAAAGCTAATGGGTTATGATAATACATGCGATGTAGGTAGCGATCTGATTTCGAGCATCTTGAGTGCACGGAAAGCCAGGAAACTGCTGCAGCACCCAAAGAACTTCAAGATCTCACGTTGA
Protein Sequence
- >SORBI_3007G036700
MSSSSPPRRPQRRAASTRPPSYDESLLDAELEGLLGDAASRRVRRLRRLSAEERQRETETEALIALSLGFPIDELLPEERPLLPPHIANAPNDYIVVRNHILASWRADPRAPLPLGCVLETVASSYDRLVAAAYGYLARAGHINFGVSAAFPAAPPPDAATQGAAAVLVVGAGLAGLAAARQLLRFGLRVLVLEGRSRPGGRVYTARLGEDKAAVELGGSVITGIHANPLGVLARQLGLPLHKVRDRCPLYYPDGRIVETRLDRTIDLVFNTLLDHATKVRESLNEAAERISLEEAIEKLRRLYHVARTDEEQMVLNWHFANLEFSNAGCLSELSLAHWDQDDPYEMGGDHCFLAGGNSRLIHALCDGVPVLYEKKVSRIEYGVDGVSVTVEEGQIFQADMVLCTVPLGVLKSGSIVFDPELPQEKLGAIQRLGFGLLDKVAMVFPHVFWDENIDTFGCLNKDSSKRGEFFLFYSYHTVSGGAVLIALVAGEAALEFEKVDPIVSLHRVLGILKGIYGPKGVTVPDPIQSVCTRWGSDPFCSGSYSHVRVGSSGADYDILAESVNDRLFFAGEATNRAYPATMHGALLSGLREASKIHRASESLVNSDQKKNSLPKRLKPPNGALLDLFLEPDLEFGRFSFVFSSLTPDDPEATGILRFSLDKRFFLQPNNPELDGDQKDYSSASGAFHLYATVSREQADQLQKSSEDDRTRLGVLCKDFSVKLMGYDNTCDVGSDLISSILSARKARKLLQHPKNFKISR