Information report for SORBI_3006G177200
Gene Details
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Functional Annotation
- Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis.
Homologous
- Brachypodium distachyon: BRADI_5g18210v3
- Oryza sativa: LOC_Os04g47270
- Saccharum spontaneum: Sspon.05G0005420-2B, Sspon.05G0005400-1P
- Setaria italica: SETIT_009376mg
- Setaria viridis: SEVIR_7G209200v2
- Zea mays: GRMZM2G019863
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: C5YDX6
- RefSeq: XP_002448321.1
- EMBL: CM000765
- AlphaFoldDB: C5YDX6
- OMA: IRNHLLC
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF260
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- eggNOG: KOG0029
- STRING: 4558.C5YDX6
- HOGENOM: CLU_004498_5_0_1
Sequences
CDS Sequence
- >SORBI_3006G177200
ATGTCCGAGCAGGCGCCACCTTACGCTCCCCTCCCCCTCGTCTCCTCCCTTGCCCCAGATCCTAGCTCTACCCCGTCACCGAACCCTACCCTTGTCCTCCCCAATCCTGTCTTCCCCAACAAGCGCAAGCGCACCGGATTCCGCCGCAAAGTACCCTCCGGGGCCCCCGCCGCCCATGCCCCCTCTCCCGTGGCTCCCTCGCAGCCACCTCCCCCCGCCTCCGCCGCCGACGATATCATAGTGATCAACCGTGAGCCGACCGCGGAGGCCGTCACCGCTCTCACCGCCGGCTTCCCGGCGGACTCGCTCACTGACGAGGAGATCGAGGCGGGCGTTGTCTCCGACGTTGGCGGCATCGAGCAGGTCAATTACATCCTCATCCGCAACCACCTCCTCTGCCGGTGGCGCGAGACCTACAACTCCTGGCTCGCCAAGGAGCCCTTCGCGACGCTCATCCCTCCCCACTGCGAGCACCTCCTCACCGCCGCCTACTCCTTCCTCGTCTCAAATAGCTACATCAATTTCGGCGTCGCCCCAGCCATCAAGGAGCGAATACCCAAGGAGCCAACGAGACCCACCACCGTCATCGTGGTAGGCGCTGGCCTTGCTGGGCTAGCTGCTGCACGGCAGCTGGTGGCGTTCGGGTTCAAAGTGATCGTCCTGGAAGGTCGCAAAAGGTGTGGTGGCCGTGTGTACACTAAGAAGATGGAAGGCGGTGGGCGCATGGCTGCTGCTGACCTTGGCGGCAGCGTGCTTACCGGGACATTTGGGAACCCGCTAGGAATTGTGGCGAAGCAACTCGGCTTGCCAATGCACAAAATTAGAGACAAGTGTCCACTCTACCGGCCGGATGGATCACCAGTTGATCCAGAGGTGGATAAGAACGTGGAGATTACATTTAACAAGCTTCTTGACAAATCAAGCAACCTGCGGGCATCAATGGGGGAGGTGGCAGTGGATGTTTCACTTGGGGCGGCTCTAGAGACATTGCGCCAGGCTGATGGGGGCGTCTCTACACAGGAGGAGATGAACTTGTTCAATTGGCATCTCGCAAATCTTGAGTATGCCAATGCAGGATTGCTGTCTAGACTAAGCCTTGCGTTCTGGGATCAGGATGATCCATATGACATGGGTGGGGATCACTGCTTCTTGCCTGGTGGCAATGGCAAACTTGTGCAAGCCCTGGCAGAGAATGTAGCAATTGTTTACGAGAGGACGGTGCACACTATAAGGTATGGAGGGGATGGGGTGCAGGTGGTTGTCAATGGAGGGCAGGTGTATGAAGGGGACATGGCATTGTGCACAGTTCCACTTGGGGTTCTGAAAAATGGAGGCATCAAGTTTGTACCGGAGTTACCACAGAGGAAGCTTGATAGTATCAAGAGGCTTGGTTTCGGATTGTTGAACAAGGTATCAATGTTGTTTCCACATGTTTTCTGGAGTACTGATCTTGATACCTTTGGGCATCTGGTTGAAGATCCAAGGCGACGTGGGGAGTTCTTTCTGTTCTATAGCTATGCAACAGTGGCTGGTGGTCCATTGTTGATGGCCTTGGTTGCTGGTGAAGCTGCCCACAATTTTGAAACCACGCCACCAACTGATGCTGTCAGCTCAGTTCTCCAGATACTAAGAGGTATCTATGAACCACAAGGGATTGAGGTGCCAGACCCTCTACAGAGTGTTTGCACTAGATGGGGCACTGACTCGTTCAGTCTAGGTTCATACTCTCATGTCGCTGTGGGGGCCTCTGGAGATGACTATGACATATTAGCCGAAAGTGTTGGTGATGGCCGTCTTTTCTTTGCTGGTGAGGCTACCACGAGGCGTTATCCAGCAACAATGCATGGTGCTTTTATCAGTGGTTTGCGGGAGGCTGCTAACATGACACTGCATGCCAATGCCCGGGCAGCAAAAAATAAAGTAGACAAAAGTCCATCGACAAACACACAGGCGTGTGCTGCTATATTAACGGACTTGTTTAGGCAACCAGATTTGGAGTTTGGAAGCTTCTCCGTTATTTTTGGAGGAAAAGCTTCTGATCCAAAATCCCCAGCTATTCTAAAGGTGGAATTAGGTGCGTCACGGAAGAAAAATGCAGCTGAAGGGGTAAAGACGGAACAGAACCACTCAAACAAATTGTTGTTTCAGCAGCTCCAGTCACACTTTAACCAGCAACAACAGCTTTATGTTTACACATTGCTATCACGACAGCAAGCTATGGAGTTAAGGGAGGTCAGAGGAGGCGATGACATGAGGTTGCACTACCTCTGTGAAAAACTGGGGGTGAAATTAGTTGGCAGGAAAGGCCTTGGTCCTGGGGCAGATGCTGTAATTGCATCTATTAAGGCAGAACGTAACAGAGGTCGAACTAGACCTGGCCCCTCAAAGCTGAAAAAATCTCTGAAGCCTAATGTTGCTGCATCATGA
Protein Sequence
- >SORBI_3006G177200
MSEQAPPYAPLPLVSSLAPDPSSTPSPNPTLVLPNPVFPNKRKRTGFRRKVPSGAPAAHAPSPVAPSQPPPPASAADDIIVINREPTAEAVTALTAGFPADSLTDEEIEAGVVSDVGGIEQVNYILIRNHLLCRWRETYNSWLAKEPFATLIPPHCEHLLTAAYSFLVSNSYINFGVAPAIKERIPKEPTRPTTVIVVGAGLAGLAAARQLVAFGFKVIVLEGRKRCGGRVYTKKMEGGGRMAAADLGGSVLTGTFGNPLGIVAKQLGLPMHKIRDKCPLYRPDGSPVDPEVDKNVEITFNKLLDKSSNLRASMGEVAVDVSLGAALETLRQADGGVSTQEEMNLFNWHLANLEYANAGLLSRLSLAFWDQDDPYDMGGDHCFLPGGNGKLVQALAENVAIVYERTVHTIRYGGDGVQVVVNGGQVYEGDMALCTVPLGVLKNGGIKFVPELPQRKLDSIKRLGFGLLNKVSMLFPHVFWSTDLDTFGHLVEDPRRRGEFFLFYSYATVAGGPLLMALVAGEAAHNFETTPPTDAVSSVLQILRGIYEPQGIEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDILAESVGDGRLFFAGEATTRRYPATMHGAFISGLREAANMTLHANARAAKNKVDKSPSTNTQACAAILTDLFRQPDLEFGSFSVIFGGKASDPKSPAILKVELGASRKKNAAEGVKTEQNHSNKLLFQQLQSHFNQQQQLYVYTLLSRQQAMELREVRGGDDMRLHYLCEKLGVKLVGRKGLGPGADAVIASIKAERNRGRTRPGPSKLKKSLKPNVAAS