Information report for SORBI_3004G160700
Gene Details
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Functional Annotation
- RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.
Homologous
- Brachypodium distachyon: BRADI_3g28930v3, BRADI_1g12050v3
- Hordeum vulgare: HORVU4Hr1G005100
- Oryza sativa: LOC_Os02g32350, OsTudor-SN
- Saccharum spontaneum: Sspon.04G0011310-4D, Sspon.04G0011310-1A
- Setaria italica: SETIT_016199mg
- Setaria viridis: SEVIR_1G178700v2
Gene Resources
- Pfam: PF00565 PF00567
- UniProt: C5XTA6
- EMBL: CM000763
- AlphaFoldDB: C5XTA6
- KEGG: sbi:8056813
- OMA: ARCADHH
- InterPro: IPR002999 , IPR016071 , IPR016685 , IPR035437 , IPR047395
- PANTHER: PTHR12302 , PTHR12302:SF2
- SUPFAM: SSF50199 , SSF63748
- PROSITE: PS50304 , PS50830
- Gene3D: 2.30.30.140 , 2.40.50.90
- OrthoDB: C5XTA6
- CDD: cd20443
- eggNOG: KOG2039
- STRING: 4558.C5XTA6
- HOGENOM: CLU_005966_2_0_1
Sequences
CDS Sequence
- >SORBI_3004G160700
ATGGCGTCCAACACAGGAGCGTCAGGATGGTTCAGGGGTAAGGTGAAGGCTGTGACATCTGGGGATTGTCTACTAATCATGGGGAGCTCAAAGGCTGAGATCCCACCTGAGAAGTCCATCACCCTGTCCTACCTTATGGCCCCAAGGCTGGCTCGCCGAGGTGGAGTTGATGAGCCTTTTGCATGGGAAAGCAAAGAGTTTCTGAGGAAGCTTTGTATAGGGAAGGAGGTCACGTTCAGAGTGGATTATACAGCTCCTAATATTGGACGAGAATTTGGAACTGTTTATCTAGGCGACAAGAATGTTGCATACTCAGTAGTTTCTGCTGGATGGGCAAGGGTAAAGGAGCAAGGCCCCAAGGGGGGCGAACAAAACCCTTACCTTGCTGAGCTGTTGAGGTTGGAGGAAGTCGCCAAGCAACAGGGTGTTGGTCGTTGGAGCAAGGAACCTGGTGCTGCTGAAGAGTCAATAAGAGATCTTCCACCATCTGCAATTGGTGAAGCAAGTGGTTTTGATGCAAAGGGTTTTGCGGTTGCAAATAAAGGCAAGAGTCTGGAGGCAATAGTTGAACAAGTCCGCGATGGCAGTACTGTTCGTGTGTATTTACTCCCTAGTTTCCAGTTTGTGCAGATATATGTTGCTGGAGTACAGGCTCCATCAATGGGGAGACGCCCATCGGTACCTACTGTAATTGCTGAAACTGATGATACTGCTAATGGCGTGAACGGTGAAGATTCTGAGGGAACACCTGCGCAACTGACTACAGCACAAAGACTTGTTGCTTCTGCAGCTTCTGCTGAAGTTCCACCAGATAGGTATGGAAGAGAAGCCAAGCACTTCACAGAGACTAGAGTCCTCAACAGAGATGTGCGTATTGTGGTGGAAGGCACAGATAGCTTTAGTAATATAATTGGTTCTGTGTATTACCCTGATGGAGAGACTGCAAAAGACTTGGCCCTTGAGCTTGTTGAAAATGGGCTTGCAAAGTATGTTGAGTGGAGTGCTAATATGCTTGATGTTGAAGTAAAAATAAAGCTGAAGAACGCAGAACTTCAGGCTAAAAAGGATCAATTGAGAATCTGGACAGGGTTTAAGCCACCGGTGACAAACTCGAAGCCCATTCATGACCAGAAATTTACTGGAAAAGTGGTAGAGGTTGTAAGTGGGGATTGTATTATTGTGGCTGATGATGCTGCTCCATATGGCAGTCCTTCAGCTGAACGTCGGGTTAATCTGTCAAGCATTAGGGCTCCTAAGTTGGGCAATGCTCGTACAGATGTGAAGCCTGAACCTTTTGGTCGTGAATCTAAGGAATTCTTGCGCACGAGGTTGATTGGCAAGCAAGTGGCTGTTGAAATGGAATACTCTCGAAGGATCAGCACTGTGGATGGACAGAGTGCTGCTCCAACAGCAAACATGGCTGATACGAGAGTTCTAGATTATGGTTCAGTATTTCTGGGTTCACCATCACAGACTGATGGAGATGACATATCTTCTGCTCCGAGCTCTGCCAGCCAGCCTGGAGTTAATGTTGCTGAGCTTTTGCTCTCACGAGGCTTTGCTAAAACATCTAAACACAGGGATTATGAGGAAAGATCACACTATTATGATGCTTTATTAGCAGCTGAATCACGGGCTGAGAAAGCAAAGAAAGGAGTCCATTCTCTAAAAGAATCTCCTGTGATGCATATAACAGATTTGACAACTGTATCTGCAAAGAAGGCCAAAGATTTCCTTCCCTTCTTGCAGCGGAACAGAAGGCATTCGGCCATCGTCGAATATGTTTTTAGTGGCCATCGGTTCAAACTAACAATTCCTAAGGAGACTTGCAGTATTGCCTTCTCATTATCTGGTGTTCGGTGTCCTGGTAAAGGCGAACCATACTCAGATGAAGCTATTGCTTTGATGAGGAGAAGGATACTGCAACGTGATGTGGAGATAGAGGTTGAAGCAGTTGACAGGACAGGAACATTCATAGGTTCTTTGTGGGAGTCCAAGACCAACATGGGCTCTGTACTTCTGGAAGCTGGGCTCGCCAAACTGAGTTCATTTGGCTTGGATAGGATCTCAGATGCTTATGTCCTACAAAGAGCTGAACAGTCTGCAAAGCAACAAAAGATTAAGATATGGGAGAACTATGTCGAGGGTGAAAATGCTTCCAACGGATCCACACCTGAATCTAAACAAAAGGAAATTCTCAAGGTTGTCGTCACGGAAGTTCTTGGTGGTGGGAAGTTTTATGTTCAGACAGTGGGTGACCAGAGGGTGGCTTCAATTCAACAGCAGCTTGCATCTTTGAAACTTAAAGATGCGCCAGTAATTGGTGCTTTTAATCCTGTGAAGGGAGAGATAGTCCTCGCACAATTTAGCCTTGACAACTCCTGGAACAGAGCTATGATTGTTAATGGACCTCGTTCTGTAGAATCTCCGAACGACAAGTTTGAAGTATTCTATATTGACTATGGCAACCAAGAGGTGGTTACCTACAGTCGTCTACGACCTGTGGACCCATCTGTTTCCTCGTCTCCTGCTCTTGCTCAGCTATGCAGCCTTGCTTTCATAAAAGTGCCCAGTCTTGAGGATGACTTCGGTCAGGAAGCAGCAGAGTATCTAAGCGAATGTTTGCTCAGTAGCTCAAAACAATACCGGGCAATGATCGAAGAACGTGATGCTTCTGGGGGAAAATCAAAAGGACAAGGAACCGGAAATGTTCTCATTGTTACTCTTGTTGATGCGGAGACAGAAAGTAGCATAAATGCTACCATGCTTGAGGAAGGGCTTGCCCGGCTTGAAAGAAGCAAGAGATGGGACACTAGGGAGAGGAAGACAGCTCTCCAGAACCTGGAACAGTTCCAGGAGAAGGCAAAGAAGGAAAGGCTGCGGATCTGGCAGTACGGAGATGTTGAATCGGACGAGGAGGAGCAGGCCCCAGCTGCAAGGAAGCCTGGAGGTCGTCGGTAG
Protein Sequence
- >SORBI_3004G160700
MASNTGASGWFRGKVKAVTSGDCLLIMGSSKAEIPPEKSITLSYLMAPRLARRGGVDEPFAWESKEFLRKLCIGKEVTFRVDYTAPNIGREFGTVYLGDKNVAYSVVSAGWARVKEQGPKGGEQNPYLAELLRLEEVAKQQGVGRWSKEPGAAEESIRDLPPSAIGEASGFDAKGFAVANKGKSLEAIVEQVRDGSTVRVYLLPSFQFVQIYVAGVQAPSMGRRPSVPTVIAETDDTANGVNGEDSEGTPAQLTTAQRLVASAASAEVPPDRYGREAKHFTETRVLNRDVRIVVEGTDSFSNIIGSVYYPDGETAKDLALELVENGLAKYVEWSANMLDVEVKIKLKNAELQAKKDQLRIWTGFKPPVTNSKPIHDQKFTGKVVEVVSGDCIIVADDAAPYGSPSAERRVNLSSIRAPKLGNARTDVKPEPFGRESKEFLRTRLIGKQVAVEMEYSRRISTVDGQSAAPTANMADTRVLDYGSVFLGSPSQTDGDDISSAPSSASQPGVNVAELLLSRGFAKTSKHRDYEERSHYYDALLAAESRAEKAKKGVHSLKESPVMHITDLTTVSAKKAKDFLPFLQRNRRHSAIVEYVFSGHRFKLTIPKETCSIAFSLSGVRCPGKGEPYSDEAIALMRRRILQRDVEIEVEAVDRTGTFIGSLWESKTNMGSVLLEAGLAKLSSFGLDRISDAYVLQRAEQSAKQQKIKIWENYVEGENASNGSTPESKQKEILKVVVTEVLGGGKFYVQTVGDQRVASIQQQLASLKLKDAPVIGAFNPVKGEIVLAQFSLDNSWNRAMIVNGPRSVESPNDKFEVFYIDYGNQEVVTYSRLRPVDPSVSSSPALAQLCSLAFIKVPSLEDDFGQEAAEYLSECLLSSSKQYRAMIEERDASGGKSKGQGTGNVLIVTLVDAETESSINATMLEEGLARLERSKRWDTRERKTALQNLEQFQEKAKKERLRIWQYGDVESDEEEQAPAARKPGGRR