Information report for SORBI_3004G042900
Gene Details
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Functional Annotation
- Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.;Encodes a vernalisation insensitive 3‐like protein, a possible component of the PRC2 complex mediating H3K27me3 in target genes
Homologous
- Brachypodium distachyon: BRADI_3g04140v3
- Oryza sativa: LOC_Os02g05840, LC2;OsVIL3
- Saccharum spontaneum: Sspon.04G0018260-1P
- Setaria italica: SETIT_016427mg
- Setaria viridis: SEVIR_1G084900v2
- Zea mays: GRMZM2G166162, GRMZM2G425774
Gene Resources
- Pfam: PF07227
- UniProt: A0A194YMN1
- EMBL: CM000763
- AlphaFoldDB: A0A194YMN1
- OMA: WHRKATE
- InterPro: IPR003961 , IPR032881 , IPR036116 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF2
- SUPFAM: SSF49265
- CDD: cd00063 , cd15521
- eggNOG: ENOG502QR8D
- STRING: 4558.A0A194YMN1
Sequences
CDS Sequence
- >SORBI_3004G042900
ATGGATCCCCCACGCGGAGGAACAGTGATTGATCCTGCTAAATGTCGATTGATGAGTGTGGATGAAAAGCGAGAACTTGTTCGTGATTTATCAAAGAGCCCAGAAAGTGCTCCTGACAGGCTCGTTGCATGGACCCGTCGGGAAATTGTAGAGATTCTTTGTTCTGATCTTGGAAGGGAAAGGAAATATACTGGTTTATCCAAACAGAGAATGCTAGATTATCTCTTCAGGGTGGTGTCTGGAAAATCATCTGGTCCTGTGGAACATGTACAAGAGAAAGAGAAAGGGAAAGAGAAAGGGAAAGAGAAAGAGAAAGAGAAAGAGTCAATTCCTGAGCCCAATACAACTAACCATCAGTCCCCTGCCAAACGACCGAGAAAGAGTGAAAATCCATCACGATTACCGATTATCACAAACAACTCTGCAGCATCTGATGTAACTGGGCCACCTAATAATCCACGCTTCTGCCAAAATGTAGCTTGCAGGGCTATTCTCAGGGACAAATTTTGCAGACGCTGTTCATGCTGCATTTGTTTCAATTACGATGATAACAAGGACCCAAGCCTCTGGTTGTCGTGTAGTTCAGACCAACACTTACAAAAGGATACCTGTGGTTTTTCATGTCATCTTGAATGTGCTCTAAAGGACGAAAGGACTGGTATCCTGCAGAGTGGACAATGCAAGAAACTTGATGGTGGCTATTATTGCACTCGCTGTTGGAAACAGAATGATTTGCTTGGGTCCTGGAAGAAACAACTGGTGACAGCAAAAGATGCTCGGCGATTGGATGTATTGTGTCATCGGATTTATCTCAGTCACAAGATCCTCATCTCCACAGAGAAGTACTTGGTATTGCATGAGATTGTTGATACAGCATTGAAGAAACTGGAGGCTGAGGTCGGTCCTATATCTGGAGCTCCGAATATGAGCCGTGGAATTGTTAGTCGACTTACTGTTGGTGCTGAAGTTCAGAAACTTTGTGCTCAAGCAATAGATGCTATGGAATCATTGTTCTCGGATGTATCTCCTGCTAGTTCAAGAATTCAGCGACCATCTATGATACCACCAAACTTTGTAAAGTTTGAAGCTATAACCCCAACATCTGTTGTGGTATTTTTGGATTTGGTTCACTGTCCTATGCTTGCCCAAGAGGCAACTTCGTTTAATATCTGGCACCGAGTGGCTGTTACTGAATCGTACCTGTCAAATCCGAGTGGCATAATACTTGCGCCATCGAAAAAATTACCTGTCACTGGGCTTGCACCGGCTACAAGCTATATCTTTAAGGTTATTGCTTTCAAGAATTCAATCGAGTTGGGGTCATGGGAAATTAGAACGAAGACAAGCTGTCAAAAGGATGATCCAAGGGGTTCAATGCCAGGTGGTACTGGACTAGGACAAAATAGTGAGAGCCCAAAGGCAAACAGTGATGGCCAGTCTGATCCTTCCTCAGAGGGTGTTGACTCAAACAATAATACTGCTGTTTATGCTGATCTAAACAAGTCCCCTGAAAGTGATTTTGAGTACTGCGAAAATCCTGAGATCCTAGATTCAGATAAAGCGTCTCATCACCCCAGTGAACGCATTGATGACTTGCAAAATATACAGATAGCTGCAGATAGGATAACAGAAGTCACTGAGCTGGAAGAAGCGCCTGGGCTCTCAGCCTCAGCCTTGGATGAGGAACCCAATGCTTGTGTTCAAACATTGCTTCTCAGAGAGTCAAACTCACTAGAACACAATCAAAGAGCTGTAGTTCCTAGATCACAGGATACATCTAATGTACTGGCTGGAAATGAGTTGATGATTGTTGGACCTCGATATGCTGGTTCTGTGCCACCCATTGCAACAAGAGGTGTGGAAAACTGCAAGGAGAATGGTGGAAGGGGCTTCAAACCCAAACCTTGTGACAACGTTGTTCATAATGGCTCTTCAAAGCCTGAAAGGGAACCGGGCAATTCGTCAAACAAAAGAACATCTGGTAAAATGGAGGACCTTGGCCACAAGGATAATTCCTCTGAAGTGTCCTATGAGTACTGTGTAAAGGTGGTTAGGTGGCTGGAGTGTGAGGGCTATATTGAGACAAACTTCAGGGTGAAGTTCCTTACATGGTTTAGCTTGCGTGCCACCCTGCAAGAGAGAAAGATAGTTAGTGTCTATGTGGATACTCTTATTGATGACCCTGTCAGTCTTTCTGGCCAGCTTGTTGACAGCTTCTCGGAGAGGATATATAGCAAAAAGCGGCCTTCCATGCCTTCTGGTTTCTGCATGGACCTGTGGCATTAA
Protein Sequence
- >SORBI_3004G042900
MDPPRGGTVIDPAKCRLMSVDEKRELVRDLSKSPESAPDRLVAWTRREIVEILCSDLGRERKYTGLSKQRMLDYLFRVVSGKSSGPVEHVQEKEKGKEKGKEKEKEKESIPEPNTTNHQSPAKRPRKSENPSRLPIITNNSAASDVTGPPNNPRFCQNVACRAILRDKFCRRCSCCICFNYDDNKDPSLWLSCSSDQHLQKDTCGFSCHLECALKDERTGILQSGQCKKLDGGYYCTRCWKQNDLLGSWKKQLVTAKDARRLDVLCHRIYLSHKILISTEKYLVLHEIVDTALKKLEAEVGPISGAPNMSRGIVSRLTVGAEVQKLCAQAIDAMESLFSDVSPASSRIQRPSMIPPNFVKFEAITPTSVVVFLDLVHCPMLAQEATSFNIWHRVAVTESYLSNPSGIILAPSKKLPVTGLAPATSYIFKVIAFKNSIELGSWEIRTKTSCQKDDPRGSMPGGTGLGQNSESPKANSDGQSDPSSEGVDSNNNTAVYADLNKSPESDFEYCENPEILDSDKASHHPSERIDDLQNIQIAADRITEVTELEEAPGLSASALDEEPNACVQTLLLRESNSLEHNQRAVVPRSQDTSNVLAGNELMIVGPRYAGSVPPIATRGVENCKENGGRGFKPKPCDNVVHNGSSKPEREPGNSSNKRTSGKMEDLGHKDNSSEVSYEYCVKVVRWLECEGYIETNFRVKFLTWFSLRATLQERKIVSVYVDTLIDDPVSLSGQLVDSFSERIYSKKRPSMPSGFCMDLWH