Information report for SORBI_3001G488100
Gene Details
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Functional Annotation
- Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.
Homologous
- Brachypodium distachyon: BRADI_1g73110v3
- Saccharum spontaneum: Sspon.01G0035370-1B, Sspon.01G0035370-2C, Sspon.01G0004090-1A
- Setaria italica: SETIT_034064mg, SETIT_000165mg
- Setaria viridis: SEVIR_9G528000v2, SEVIR_5G001700v2
- Triticum aestivum: TraesCS4D02G287000
Gene Resources
- Pfam: PF04096 PF12110
- UniProt: C5WVX6
- EMBL: CM000760
- AlphaFoldDB: C5WVX6
- KEGG: sbi:8059807
- OMA: RWKFEVD
- InterPro: IPR007230 , IPR021967 , IPR036903 , IPR037665
- PANTHER: PTHR23198 , PTHR23198:SF26
- SUPFAM: SSF82215
- PROSITE: PS51434
- Gene3D: 1.25.40.690 , 3.30.1610.10
- OrthoDB: C5WVX6
- eggNOG: KOG0845
- STRING: 4558.C5WVX6
- HOGENOM: CLU_012427_0_0_1
Sequences
CDS Sequence
- >SORBI_3001G488100
ATGGCAGCTAGAACTGTATTCCCCGTGCTGCGCTCCTCTGAGTACTTCACAAGGCCATCAATTGATGAGCTGGTAGAGAGGGAGGTGGCTAATCCTGGATACTGCAGCAGGGTTCCAAACTTCATCATAGGGAGGGCTGGATATGGGCAGGTTAGGTTCTTGGGCGACACCGATGTGAGGGGCATTGACCTGAATGAAATTGTCAGGTTTGAAAAACACTATGTGGTGGTTTATGAGGATGAGACTTGTAAGCCACCTGTAGGGCATGGTCTTAACAAAGCAGCAGAAGTGTCCTTGCTGCTGAGTTTGAAGGATCTTCCGGAGCCCAGTATCCTTGTTGAGGTGCTAAGGTGTCGTGCAAGAAAGCAAGGTTCTAGGTTTCTTTCATTCAATCCAGTGAATGGAAAATGGAAATTTGAGGTTGATCATTTTAGTAGATTTGGGCTTGTGGATGAGGAGGAAGAGGATGCTGTGATGGACGAGGCAGCTGTTCGGCAGCCAATTACTGAAGTAAGAGAAAGAGACCCACCTTCAAATGGTCATGAAATTGAGCTTTCCCATTCATTGCCTGCTCATCTCGGGCTTGACCCTGCAAAGATGCAAGAAATGAGGATGGTGATGTTTTCCAATGAGGAAGAAGATGAATATATGGAGGATGATGGGTTCCCTTCTGACGAGAGGTACGTTAGCAGAGAAAGGATGAATGTGGATTCACCTACCTCAAGCGGTAAAGGTTTGAGGTTAAGGTCTCTCTCTCCCTTGCACATGTCTTCTCAGAAGTCTGGCAGGAGATCTGGTATGCCGGTTCGGAAAGAACCTCAGGCACTTTTGGAATACAGTATGAATTCTTCAGAGCTTGGTCCATCGACTCAGGGTATTCTTATGTCTGGGCAAAACAGAGGATTTCCAGTGAGTATGACCAAGGTGGATGGTTTTAAGCTGCCGGCTGACCAAGAAACTCCTGTTGCTGGAAACATGTATACTAATTGTGTAGTGGATGCTGCTTTATTCATGGGTAGATCATTTCGTGTTGGTTGGGGACCAAATGGTTTACTTGTACATTCAGGTAGTCTGGTCAATAATCCTGGAACAGGCTTATCTTCTGTTATTCACATAGAGAAAGTTGCAAGTGACAAACTTGTGCGTGATGATAAGAGCAAGATTAAGGATGACCTAACAGAACTATGTTTTTCTGATCCAATGGGCCTCCATAAGAGTCTTGATCATGAGATTCTGGAGACGGAGTCTGACTCGTTCAGATTAAAGCTTCAGAAAGTCATGGCAAATCGTTTGGTTTTGCCTGACATCTGCAGGTCATATATTGACATCATTGAAAAGCAGCTTGAAGTCAGTGATTTATCTATGTCTACGCGTGTGCTGTTGATGCACCAAGTAACAGTGTGGGAGTTAATCAGGGTCTTGTTCTCAGAAAGAGCAACTGGTAACCAGTTGGAGCCTGTTGGAGATGATGATCAGGAAGGCATGGTTTTAGACAAAAAAGAAGGCTATGTCGACATAGATCCTGAAGCACTTCCTTTGTTTAGGAGAGCAGACTTTAGCAATTGGTTACAGGACAGTGTTTGCCATCGGGTGCAAGGTGAGGTGGGCTCCTTAAATGATGCCAGGTACTTGGAACATATCCTTCTTCTTTTGACTGGTCGACAATTGGACACAGCCACAGAAATTGCTGTCTCAAGGGGTGATGTTCGGTTGGCAATCTTGCTAAGTCAGGCAGGTGGGTCAATGTCAAATCGATCTGACCTTGCTCAGACACTGGATCAGTGGAAAATGAATGGTCTAGATTTTGATTATATTGAGGAAGACTGGTTAAAGGTATATAGGTTGCTTGCTGGTAACGTACAGGCTGCTTTTCTAGATTCACCAATTGACTGGAAAAGGTACCTTGGTTTGATTATGTGGTATCAATTATCACCTGAAACACCACTTGATATTATCATTCGTTCTTATGATCAACTCCTTGGTGAGGGCAAAGTTCCCTATCCTGTTCCTGTATATATAGATGAAGGACCTCTTGATGAAGCGCCTCAGTGGTCCCCAGGTGACCATTTTGATATCTCCTTCTACCTAATGCTTCTTCATGCCAATCAAGGCGAGAAGTTTGGGCTGCTAAAAACTATGTTCAGTGCATTCTCATCTTCATTCGACCCCTTGGATTATCATATGATATGGCATCAGCGTTCGATTTTGGAAGCTGTTGGTGCTTTCAGTTCAAATGATCTTCACCTGCTAGATTTAAGTTTTGTTTATCAATTACTTTGTCTTGGGAAGTGCCATTGGGCTATCTATGTCATTCTACACATGCCGTATCTTGACGATGCCCCATACATTCATGAAAAATTAATCAGGGAAGTTTTATCACAGTATTGTGAGTCATGGAGTAGAGATGATGCTCAAAGGCAATATATTGTGGAACTTGGTATACCAGAAGAATGGATGCATGAAGCTCTGGCTCTTTATCACGAATACTATGGAGATAAGCAGGGTGCACTGGAGAATTTTATTCAGTGTGGCAACTGGAAGAAAGCTCATACTATTTTCATGACTTCTGTTGCTCATTCTATGTTTCTGTCATCTAACCATCAGGAGGTCTGGAAGATCACAAGTTCCTTGGAGAACCATAAGTCTGAAATTGCTGACTGGGACCTTGGTGCCGGCATATACATAGACTTCTACGTTCTAAAGAACTCAATGCAAGAAAGAAATGCCATGGATGATTCGGATTCACTCGAGGAGATAAGTGAATCATGCAGAAATTTCTTTGGCCGATTAAATGATTCATTGTTAGTCTGGGGAAGCAAATTACCTGTTGAGTCAAGGGCATGCTACTCGAAGATGGCAGAGGAGCTATGCGCGCTTCTCGTGGACACCCCAAGCGAGACACTGAATCTACCCATGGGATGTCTTCAGACAATGCTCAACGCTCCAGTTCCTGATGAAATCAGGTCGTCGTACCTGCAGGATGCACTCTCCGTCTTCACCGAAATTCTTTGCAGCGATTCATAG
Protein Sequence
- >SORBI_3001G488100
MAARTVFPVLRSSEYFTRPSIDELVEREVANPGYCSRVPNFIIGRAGYGQVRFLGDTDVRGIDLNEIVRFEKHYVVVYEDETCKPPVGHGLNKAAEVSLLLSLKDLPEPSILVEVLRCRARKQGSRFLSFNPVNGKWKFEVDHFSRFGLVDEEEEDAVMDEAAVRQPITEVRERDPPSNGHEIELSHSLPAHLGLDPAKMQEMRMVMFSNEEEDEYMEDDGFPSDERYVSRERMNVDSPTSSGKGLRLRSLSPLHMSSQKSGRRSGMPVRKEPQALLEYSMNSSELGPSTQGILMSGQNRGFPVSMTKVDGFKLPADQETPVAGNMYTNCVVDAALFMGRSFRVGWGPNGLLVHSGSLVNNPGTGLSSVIHIEKVASDKLVRDDKSKIKDDLTELCFSDPMGLHKSLDHEILETESDSFRLKLQKVMANRLVLPDICRSYIDIIEKQLEVSDLSMSTRVLLMHQVTVWELIRVLFSERATGNQLEPVGDDDQEGMVLDKKEGYVDIDPEALPLFRRADFSNWLQDSVCHRVQGEVGSLNDARYLEHILLLLTGRQLDTATEIAVSRGDVRLAILLSQAGGSMSNRSDLAQTLDQWKMNGLDFDYIEEDWLKVYRLLAGNVQAAFLDSPIDWKRYLGLIMWYQLSPETPLDIIIRSYDQLLGEGKVPYPVPVYIDEGPLDEAPQWSPGDHFDISFYLMLLHANQGEKFGLLKTMFSAFSSSFDPLDYHMIWHQRSILEAVGAFSSNDLHLLDLSFVYQLLCLGKCHWAIYVILHMPYLDDAPYIHEKLIREVLSQYCESWSRDDAQRQYIVELGIPEEWMHEALALYHEYYGDKQGALENFIQCGNWKKAHTIFMTSVAHSMFLSSNHQEVWKITSSLENHKSEIADWDLGAGIYIDFYVLKNSMQERNAMDDSDSLEEISESCRNFFGRLNDSLLVWGSKLPVESRACYSKMAEELCALLVDTPSETLNLPMGCLQTMLNAPVPDEIRSSYLQDALSVFTEILCSDS