Gene Details:

  • Gene ID: Solyc10g005080.3
  • Suggest Gene Name: CIRCADIAN CLOCK ASSOCIATED 1;LATE ELONGATED HYPOCOTYL 1a
  • Description: putative flowering gene
  • Species: Solanum lycopersicum
  • Source: Putative flowering gene from PlantCFG

Protein Features:

Functional Descriptions:

  • Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis.;late elongated hypocotyl and circadian clock associated-1-like protein 1, LATE ELONGATED HYPOCOTYL 1 gene a

Homologous

Sequences:

CDS Sequence
  • >Solyc10g005080.3
    ATGGACCCTTATTCCTCAGGGGAGGAACTTGTTGTTAAGACAAGGAAACCTTATACAATCACTAAGCAACGAGAGCGATGGACGGAGGAGGAGCACAATAGGTTCCTAGAAGCTTTGAAACTTTATGGGCGTGCTTGGCAGCGCATAGAAGAACACATAGGAACTAAAACTGCTGTGCAGATCAGAAGTCATGCGCAAAAGTTTTTTACAAAGTTAGAAAAGGAGGCTCTTACAAAGGGGGTCCCAACAAGTCAAGCACTTGACATTGAAATTCCTCCTCCACGACCTAAAAGGAAACCAAGTAATCCTTATCCTCGTAAGACAAGCGCAGCAGGTCACTCATCACAGGTGGGAGCAAAAGATGGGAAATATTCGACAACTTTTTCTTCCATCTGTGAGGAAAGGAACTTATTTGACCTGGAGAAAGAACCGATTACTGAGAAACCTGGCGGAAACGAGAAGCTGGGCAATGTAAAAGAAACCCAGAACAAGAAAAACTGCTCCCAAGGGTTAACTAAGGAAGGTGCTTCTGCAGCCTCTATGTCTTCAGGAAAGTCCTTGCAAGCACATGTGGCACCTACAGATGTGTGTGCCTTTAGTGAGTCTGTGTCTGTCACCAAAGGAGTGGTTAACAATGATAACGCAAATAAATCTTTTCTCATTGTTGAATCCAAAGAACATCAACAGTCAGAAATACTCGATATCAGACAGTCCTTTCAAGGTAACAGCTCCTGTAACACCTTTGACGGGGGGAAATCTTGCCAGTCGAGTGAAAAGTTGGCACAAGGTGAGAAAAAACATCCATCGTTTCAGCCAAACCATTTGGGGGAATTCTCAAGAAATGATATGCAAGTGCTACACAACTATCCAAGACATGTGCCAGTGCATATTCTTGATGGAACAAATGGTTCTCAAATAGCCCCAGATATGTTTAATCATGAATCTACGAGTCAGCAGATAAATGGGGTCCCGGGGCTCCCAAATTTGTATTCTAACCCTGCTTCATCCACCACATCTGAGCACCACAGTAACGCTCCACAGTCATCCATTCATCAGTCATTTTCTTGTTTCCACCCCATTTTCACCCCTATTCGTGATCCAGATGATTACCGATCGTTTTTTCAATTATCCTCCACCTTCTCCAGCCTTATTGTTTCTGCTTTATTGCAAAACCCAGCAGCACATGTCGCAGCAAGTTTTGCCGCTAGCTTTTGGCCTTATGCAAATATGGAACGTCCAACGGATTCTCCAACTGATAACACCGCTAGCCAGATTAACTCAGCTCCTAGTATGGCAGCAATTGCTGCTGCCACAGTAGCAGCTGCAACTGCATGGTGGGCAGCCCATGGGCTCTTACCATTGTGCTCTCAATTTCAAAGCAGTTTTACCTGTGTTCCTACATCAGCAACATCAATGCAAGTGGATGCCTGTCAACCTAGAGTAGACAAGAACGAAGGAAGAGAGGGAACTCATGATTCTCCCCATGTTCAGGAACCTGTCCCAGAATGCTCTGAAGCTTTGCAAGAACAACAATCAGGTTCTAAGTTGCCACCTTCTCTATCATCAGAATCGGAGGAGAGTGAAGGTAGGAAGCTAAAAACTGGGTTAACGGCCACTGATACTGAGCAAGGAGCTGCAGTTACTAAAATTAATGAGCCAAACGCAGAAAAGGGCGGGAAGCAGGTAGATCGCTCTTCCTGTGGATCCAACACACCTTCAAGTAGTGAAATTGAGACAGATGCTTTGGAGAAGGATGAGAAAGGTAAAGAAGAGCCCCAAGAATCTAATATTAACCTTCTAGCTGGAGAGGCTGCGAATCGGCGTTATAGAAATTTCATCAGTCCAACCGAATCTTGGAAAGAAGTCTCCGAAGAGGGACGGATAGCTTTCCAGGCTCTTTTCACCAGAGAAGTGTTGCCTCAAAGTTTTTCTCCTTCACTTGATCTGAAAAATAAGGGAAAGATCATTCTTGAAAAGTTGAAGCAAAAGCCAGACGAGAAAGTTCAATGTGGACCGCAGTTAGATCTTAATGATATGGCATCCAATATCTGTTCCAGTCACCAAACAATGGAAGACAATGTGTTATTAATTGGCAACAAAGAAGATGTAGAAACATGCCTACCAATGATAGAACTTGGACAAGTAAGGTTGAAAGCTCGCCGTACTGGATTTAAGCCTTACAAGAGGTGCTCATTGGAGGCAAATGATAGCAGGGTGACAAGTTCTAACTGTCAGGATGAAGAAAAAAGCTCGAAAAGACTTCGGTTGGAAGGAGAAGCTTCTACTTAG
Protein Sequence
  • >Solyc10g005080.3
    MDPYSSGEELVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEALTKGVPTSQALDIEIPPPRPKRKPSNPYPRKTSAAGHSSQVGAKDGKYSTTFSSICEERNLFDLEKEPITEKPGGNEKLGNVKETQNKKNCSQGLTKEGASAASMSSGKSLQAHVAPTDVCAFSESVSVTKGVVNNDNANKSFLIVESKEHQQSEILDIRQSFQGNSSCNTFDGGKSCQSSEKLAQGEKKHPSFQPNHLGEFSRNDMQVLHNYPRHVPVHILDGTNGSQIAPDMFNHESTSQQINGVPGLPNLYSNPASSTTSEHHSNAPQSSIHQSFSCFHPIFTPIRDPDDYRSFFQLSSTFSSLIVSALLQNPAAHVAASFAASFWPYANMERPTDSPTDNTASQINSAPSMAAIAAATVAAATAWWAAHGLLPLCSQFQSSFTCVPTSATSMQVDACQPRVDKNEGREGTHDSPHVQEPVPECSEALQEQQSGSKLPPSLSSESEESEGRKLKTGLTATDTEQGAAVTKINEPNAEKGGKQVDRSSCGSNTPSSSEIETDALEKDEKGKEEPQESNINLLAGEAANRRYRNFISPTESWKEVSEEGRIAFQALFTREVLPQSFSPSLDLKNKGKIILEKLKQKPDEKVQCGPQLDLNDMASNICSSHQTMEDNVLLIGNKEDVETCLPMIELGQVRLKARRTGFKPYKRCSLEANDSRVTSSNCQDEEKSSKRLRLEGEAST