Gene Details:

  • Gene ID: Solyc06g071680.3
  • Suggest Gene Name: HISTONE DEACETYLASE 6, RNA-MEDIATED TRANSCRIPTIONAL SILENCING 1
  • Description: putative flowering gene
  • Species: Solanum lycopersicum
  • Source: Putative flowering gene from PlantCFG

Protein Features:

Functional Descriptions:

  • RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.

Homologous

Sequences:

CDS Sequence
  • >Solyc06g071680.3
    ATGGACTCCTCCACCGTAGACGGCGGCGCATCGCTTCCATCAACCGGAACCGACGCTAGGAAGCGTCGTGTCTCTTACTTCTATGAGCCAACCATCGGCGATTATTACTACGGCCAAGGTCATCCGATGAAGCCGCACCGTATCAGAATGGCCCACAATCTCATCGTAAACTACTACCTACACAGGCGTATGGAAATCAGTCGTCCTTTTCCGGCGGGAGAGGATGATATCCGACGTTTTCACTCGCCGGATTATGTTGACTTCCTTGCTACCGTTTCACCGGAGACTCTTCATGACCATACACATTCACGTCATCTCAAACGGTTTAATGTTGGTGAGGATTGTCCTGTTTTCGATGGGCTTTTTGGGTTTTGTCAAGCTTCTGCTGGTGGATCTATTGGGGCTGCGGTTAAGCTTAATCGGCAGGATGCTGATATAACGATCAACTGGGCTGGTGGTCTGCACCATGCAAAGAAAAGTGAAGCTTCTGGTTTTTGCTATGTGAATGATATTGTTCTTGGTATTCTTGAGCTCCTCAAAGTCCACAAGCGTGTATTGTACATAGACATTGATATTCACCATGGTGATGGTGTTGAGGAGGCTTTTTTCACCACAGATAGAGTCATGACAGTATCTTTTCATAAGTTTGGGGATTTCTTTCCTGGTACGGGGCACATCAAAGACATTGGTGCAAATCAGGGGAAGTACTATGCCCTAAATGTCCCATTGCATGATGGGATGGATGACGATAGTTTTGGTAGACTATTTCGTCCCACAATACAAAAAGTCATGGAGGTCTACCAACCTGAGGCTGTTGTTCTTCAATGTGGGGCTGATTCACTGGCTGGAGACAGGTTGGGTTGCTTCAACTTGTCTGTCAAGGGCCATGCCGCTTGCCTTAGGTACCTCAGATCCTTCAATGTCCCTCTGATGGTATTGGGTGGTGGAGGTTATACTATAAGAAATGTCGCTAGGTGCTGGTGCTATGAGACAGCAGTTGCAGTTGGGGTAGAACCTGAAAACAAGTTGCCTTACAACGAGTATTATGAATATTTTGGCCCAGATTATACTCTTCATGTTGAACCAATTCCCATGGAGAATCTAAATTCACCTAGGGATCTGGAGAAGATGAGGAACATATTGCTTGAGCAAATCTCTCAGTTGCCTCATGCACCTAGTGTGCCATTTCAGACCACTCCTTCTACAACAGAAGTCCCAGAGGAGAAAGAGGAAAATATGGATCGAAGGCCTAAACCACGGATATGGAATGGTGATGGTTATGAGTCTGATGCTGATGAAGACGAGAAACCTAGACAGCGAAGTTCAGATAGTAATCTTACTCCAGTGGAATCATCTGACATGAGGGATGTGGACGACCAAGCCAATGCAGATGACATGGTTGATGATCATCCCTAG
Protein Sequence
  • >Solyc06g071680.3
    MDSSTVDGGASLPSTGTDARKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVNYYLHRRMEISRPFPAGEDDIRRFHSPDYVDFLATVSPETLHDHTHSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRQDADITINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHKRVLYIDIDIHHGDGVEEAFFTTDRVMTVSFHKFGDFFPGTGHIKDIGANQGKYYALNVPLHDGMDDDSFGRLFRPTIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHAACLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYTLHVEPIPMENLNSPRDLEKMRNILLEQISQLPHAPSVPFQTTPSTTEVPEEKEENMDRRPKPRIWNGDGYESDADEDEKPRQRSSDSNLTPVESSDMRDVDDQANADDMVDDHP