Gene Details:

  • Gene ID: Solyc03g063220.2
  • Suggest Gene Name: PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
  • Description: putative flowering gene
  • Species: Solanum lycopersicum
  • Source: Putative flowering gene from PlantCFG

Protein Features:

Functional Descriptions:

  • Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).

Homologous

Sequences:

CDS Sequence
  • >Solyc03g063220.2
    ATGGCTTCTAAAGTGTACAAGTGTAAGCCGGACCATGAAACACGCGTACGACGCCAAAAGGGTCTTGAAGCACCTAAAGAACCTCAACGACCTAAAACACACTGGGATCATGTTCTTGAGGAGATGGTCTGGTTGTCGAAGGACTTTGAATCAGAGAGGAAGTGGAAGTTGACTCTAGCAAAGAAGGTTGCTATTCGAGCTAGCAAGGGAATGCTTGATCAGGCGACACGGGGAGAAAAGCGTGTTAAGGAAGAAGAGCAACGTCTGCGTAAAGTTGCACTCAATATTTCAAAGGACATCAAAAAATTTTGGTTGAAAATAGAGAAGCTGGTTCTTTACAAGCATCAGTTGGAGGTAGATGAGAAGAAGAAGAAAACACTTGATAAGCAGCTAGAGTTTCTTCTTGGACAAACAGAAAGGTACTCAACAATGCTTGCAGAGAATCTTGTAAGTTCACAAAGTACTTGCAAACGAACCAATTCTTTGCCTGCACCAGAAGCATTTAGAATTCAGTGTAAAGACGGGAGTGAAGGGGATGTAACAAATCGAGACTGTGTTGGAGAAAATCTTCAACCTCTTTCAACTGGTAGTGATATTGATGACGACTTCGGCGTGCAATCTGAAGACGAAATGGAAGATGACGAGCATACTATTGAAGAAGATGAGGCTGTTATAACTAAAGAAGAAAGGGAAGAAGAGTTGGCTGCTTTACAAAATGAAGTGGATCTACCTCTTGAAGAGCTCCTTAAGCGCTATGCAATTGGGGAAGCTAGCAGAGACTGTAGCCCCGAGAAGAGTGCTGCAGATGTTATAGTCAGTTCTGGCAAGGGCAGGGATAAATGTAGAGATGTTGATGTTGCTACTGAAACCGACAAAGACAGCTCACCTGCAATTTCTGGTCGTCGTTCTGTTGAAAGTAATGGGGTCTTATCAGTTCCAAATAATTATTGTTCTGACCTAGGGAAAGAGAAGCTAAGAAGTTCTCGAAAGAAGTATCAGGAGTTCGGCCAAATTAATTTGTTGGATGACTTTAATGATGAACAGGATGATGATGATTATGTCGTTGCTGTTGGTGAAGATAAAGGATACAATATGGATGATGAAACAACTTTGCTAGAGGAGGAGGAGTTGGCAAATGCAGAGGCAAATGACGCTGCTGATGAGGTAAAAGCTCAGTCTCTTGACCTTACCGAAATTCTGATGCATTCTGTTATACATAGACCCAGTCCGCAGCTTTCCCGTCATATTGCACTGCTGCAAAAGGAGAGCGAACTTCCTTTAGATGAGCTCCTTGCTAGGTATAAAGAGGATTTTGATACTGATGAATATGTTGACGATGATTCTGAATCATATGCGTCTGCTTCTGATGAACTCCTGGATTCTCCAGCACACAATGAATCTGAACCTGTTCGAGTAAACGATGTACCATGCGATGTACTGCCCACTACAGTCGCTGAGGATGGAGAAAACGAAGTTGAAAGTGTGGATAAAACAGGGGAAGAAAAGCAGAGTGAGGATATAATTGCTGATGCAGCAGCTGCTGCCAGATCCGCACAACCAACGGGTAGCACCTTCTCAACAACCAAAGTGCGGACTAAGTTCCCCTTCCTTCTAAAATTTCCCCTTCGTGAGTATCAACATATTGGTTTGGATTGGCTTGTGACCATGTATGAGAAGAAACTTAATGGAATCCTAGCAGATGAAATGGGTTTGGGGAAGACCATCATGACCATTGCTCTTCTTGCTCACCTAGCATGTGAAAAAGGAATATGGGGTCCTCATCTTATTGTTGTCCCAACTAGTGTCATGCTAAACTGGGAGACTGAGTTTCTTAGATGGTGTCCTGCTTTCAAAATCTTGACATATTTTGGCAGTGCTAAAGAGCGAAAGATTAAAAGGCAAGGCTGGTTAAAGCCAAACTCATTTCATGTATGTATCACAACTTACAGACTCGTTATACAAGACTCCAAAGTTTTCAAGCGTAAGAAGTGGAAATACCTAATTTTAGATGAAGCTCATCTAATAAAGAATTGGAAATCGCAGAGATGGCAGACACTTCTCAACTTTAACTCAAAACGGCGTATACTTTTGACTGGTACACCATTGCAGAATGATCTCATGGAGCTGTGGTCTCTAATGCATTTCTTGATGCCTCATATTTTTCAGTCTCACCAAGAATTTAAAGATTGGTTCTGTAATCCTATTTCTGGAATGGTTGAGGGACAAGAAAAGGTTAATAAGGAAGTTGTTGATCGCTTGCATAATGTCCTTCGTCCCTTTATTCTCCGCCGTTTGAAAAGGGATGTGGAGAAGCAGCTTCCTTCAAAACATGAGCACGTAATTTATTGTAAGCTCTCGAGGAGGCAGCGTAATTTGTATGAAGACTTCATTGCTAGTTCAGAGACACAAGCCACTCTAGCTAGTTCAAATTTTTTTGGGATGATAAGTGTAATAATGCAACTTCGTAAGGTGTGCAATCATCCTGACTTATTTGAAGGACGTCCAATAGTGAGCTCCTTTGATATGAGTGGTATTGATATGCACTTGAGCTCTTCCATTTGCTCGATGCTTTCACCTGGTATATTTTCAACTATCAACCTTGGTGCTTTGGGGTTGTTGTTTACACATCTTGATTTTTCAATGACGTCTTGGGAGAGTAATGATGTTCAATCCATGGCTACCCCGTCAAGCTTGATTGAGGGTCGTGTGTCTCTGATTCATGATGAAGAAACTTCTCTAGGACTTAAACGGAATAAGAAGTTTCATGGAACAAACATATTTGAGGAGATCCAAAAGGCACTTGCTGAGGAGAGACTGAGAGAAGCAAAGGAGAGAGCAGCAGCTATTGCACGGTGGAATTCCATAAAGTGTAAGCAGAAACCTGTATATTCTACAAGTCTTCGGGAGATTGTTACTGTGAAAAATCCAGTTCATGGCATTTACTGTCAAAAAAGTAATCCCATGTCATTTTTGTACTCCGCTAGGCTTGCGGAATCAATACTGACACCAGTTGAGAGATTCCAACAAATGGTTGATCAGGTTGAGACATTCATGTTTGCAATTCCTGCTGCACGTTCCCCAGCACCTGCTTGCTGGTGCAGTAAACCAGGAACTGCCATATTTTTCAGTCCAACCTTTAAGGAGACATGTTCTGAGGTTCTTTCTCCTCTTCTCACTCCTTTTCGCCCAGCCATTGTTAGAAGGCAAGTCTACTTTCCAGATAGGCGGCTTATACAATTTGACTGTGGAAAGCTGCAGGAGCTTGCAGGTTTATTGAGGCGTTTAAAATCAGAAGGTCACCGTGCATTAATTTTCACCCAGATGACAAAGATGCTTGATGTTTTAGAAGCTTTCATTAATTTGTATGGTTACACTTACATGCGTTTGGATGGTTCTACTCCGCCAGAAGAGAGACAAACTTTGATGCAACGTTTCAACACGAATCCAAAGATTTTCCTGTTTATTTTATCAACCCGTAGTGGTGGAGTTGGCATCAACTTGGTGGGTGCAGACACAGTCATCTTTTATGATAGTGACTGGAACCCAGCTATGGATCAACAAGCTCAAGATCGCTGTCATAGAATAGGCCAGACCCGTGAAGTACACATTTATCGATTGATAAGTGAGAGTACCATTGAAGAGAATATTTTGAAAAAGGCAAACCAGAAGCGTGCTCTGGATGATTTGGTTATACAGAGTGGAAGTTACAACACTGAATTCTTCAAGAAACTAGATCCAATGGAATTGTTCTCCGGCCACAGAACAGTTTCCTTAAAGAATATTGAAGTAGTGAAGAACAGCAATGTCACTGAGGTTCAGCTTTCTAATGCTGACGTTGAGGCTGCTTTGCAAAATGTAGAAGATGAGGCAGATTACATGGCTCTGAAGAAAGTTGAAGAGGAAGAGGCAGTAGACAATCAGGAGTTCACTGAAGAAGCAATTGTCAGTAAAGAACTTGTGGCAACGTCAAATGTTAGCAATCCATTAAAAGAACAAGCAATTACTTTTGCTAGTAAAGAAGATGACATTGACATGCTGGCTGATGTCAAACAGATGGCAGCAGCAGCAGCTGCTGCCGGACAAGCTATCTTGTCTTTCGAGAGTCAGCTACGTCCAATTGATCGGTATGCTGTACGTTTTCTGGAGTTATGGGACCCTATCATAGACAAGACAGCTATCGAGTCACAAGGTCATTTTGAAGAAACTGAATGGGAATTGGATAGAATTGAAAAGTTGAAGGAAGATATGGAAGCAGAGATTGATGATGATGAAGAGCCTTTAGTTTACGAGAGTTGGGATACTGATTATGCAACTGAGGCATACAGACAACAGGTTGAGACTTTGGCAAAGCATCAGTTGAAGGAGGAGCTGGAAGCTGAAGCCAAAGAGAAAGAGCTTGCGGAATATGAGAACTCCATGGGGCATACATCTTCTGTTCCAAAAACCAAATCGAAGAAGAAGGCGAAGAAAACAAAGTTCAAATCTTTGAAAAAAGGAGGTCTAGCTTCTGAACGGCAATCTTTGAAGGAAGAGTCTTCTATAGAGTTGATGCCCATAGATGATGATAATCTATCCAGTGAGCCAGTTACGACGCCGGATTCTGCTCAAGAGAAGAAGCGTAAACTTCCAAGATATGATGAGGATGTGAAAGGCGCCAAGAAGTCTAAAAAAATGAAAAAGTCCTCTGAGGTATCTTCTCTGGTAATACATTCAACATATCTTGGAAAGAGGCAGGTTGAATCTAAAGAATTGAAACAGTATGATGTTGGCACGATGAACATTGAACTCAAACCAATAAGCAGAAGCAAGATGGGAGGGAAAGTCTTAGTCAGTCCAATACCTGTTAAACGAGTCTTTTCTATTAAATCAGAAAGGCCAATTAGGAAAGGTAAAACATGGTCTAAAGATTATTTTCCATCAGCTGATTCATGGTTGCAACAAGAAGATGCAGTACTTTGTGCTTCTGTTCATGAGTATGGTCCTCACTGGAGTTTGGTGAGTGATATCCTGTATGGAATGACTGCTGGCGGTGCTTATAGAGGAAGATATCGTCACCCTCTTCATTGTTGTGAGAGGTTTAGGGAACTCGTACAGAGATATGTATTATCTGCTGCAGACAATGTAAATGATAGATCCAACAATACTGGTTCTGTTAAAGGTCTTCTCAAAGTGACTGAGGGTAGGGACCTTTCAAAGAATGAAACCATTGGAGATAGTGTTACTGGGGAAAATGTTCGACTGGTGTTGGATATTGCATCAGAAATTCCAGATCACGAGCCACTTGTTCAAATACATTTCTTTGCCCTTCTTTCTTCCGTGTGGAAAGTGCAGAAAAACCTCAAAAAGACGTTCTCATCTTCCCAGAATGGATTCTTTCATTCTGGAAGTTTATTTTCACCAATTATGAACCGTGTTTCAACGAATCACTCAATGGGTCCACCGATAAGGAGATTTTCTAATTCAAGTTTATGCACCAAGTTAGTAGCAATTGCTCTTTCTGATCAGCAGAGTGCACAGAGTGATGAGAGAGTCCGCATCTGTGACCAGAGAGAGGAAGTTTCTTTTCCTTCTGAGCATTTGGATATTACACTGGAATTTGGGGCAGAGAAAGATGATAAGACAATTCCCTTGCTACATCCGGTAACTGTCAAAATACTTGGTCCTGAATCTTCATTGTTTCCAAGAATGACAACAGCTGAGCATCATCATTTCAAGTCTTCCCAGATTATGGCTGAAAACCGATTCTGGGCTGCATCAAGTAGTGAAGTTTGTTTGGATTGGGCTTCCCTTGCTTTTCCTATTAGGGATGCCAAGTCACGCACTCCGTTGAAATCACAATTTTTGGGGAAGCATAAGCCCTCTGATTCGGTGAAGGTATCGAAATCTAAGTCCAGAAAGATTTTAATGGAATCTAGTGACGTTGGTCATACCAAGGATCAATTGTTTCCGCCAATGCCATCTGTGTCTGATGATTCCTGTCCAACAGCTGATGTGGGGTTTTCATTCCTTACAGAAAGTGGAAATGATTTCGAAGATAGGACCCTGTTAGATCTAAATCCGATATTTAATGCAGGGAGTGAGGATGTACTCCGTCATGATTATGTTCCCGAATTTATATCAGGACTTGATGATTGGTCGGTGTTTCCTGAGTTCACAGATATCGGGTAG
Protein Sequence
  • >Solyc03g063220.2
    MASKVYKCKPDHETRVRRQKGLEAPKEPQRPKTHWDHVLEEMVWLSKDFESERKWKLTLAKKVAIRASKGMLDQATRGEKRVKEEEQRLRKVALNISKDIKKFWLKIEKLVLYKHQLEVDEKKKKTLDKQLEFLLGQTERYSTMLAENLVSSQSTCKRTNSLPAPEAFRIQCKDGSEGDVTNRDCVGENLQPLSTGSDIDDDFGVQSEDEMEDDEHTIEEDEAVITKEEREEELAALQNEVDLPLEELLKRYAIGEASRDCSPEKSAADVIVSSGKGRDKCRDVDVATETDKDSSPAISGRRSVESNGVLSVPNNYCSDLGKEKLRSSRKKYQEFGQINLLDDFNDEQDDDDYVVAVGEDKGYNMDDETTLLEEEELANAEANDAADEVKAQSLDLTEILMHSVIHRPSPQLSRHIALLQKESELPLDELLARYKEDFDTDEYVDDDSESYASASDELLDSPAHNESEPVRVNDVPCDVLPTTVAEDGENEVESVDKTGEEKQSEDIIADAAAAARSAQPTGSTFSTTKVRTKFPFLLKFPLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLRWCPAFKILTYFGSAKERKIKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPSKHEHVIYCKLSRRQRNLYEDFIASSETQATLASSNFFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMSGIDMHLSSSICSMLSPGIFSTINLGALGLLFTHLDFSMTSWESNDVQSMATPSSLIEGRVSLIHDEETSLGLKRNKKFHGTNIFEEIQKALAEERLREAKERAAAIARWNSIKCKQKPVYSTSLREIVTVKNPVHGIYCQKSNPMSFLYSARLAESILTPVERFQQMVDQVETFMFAIPAARSPAPACWCSKPGTAIFFSPTFKETCSEVLSPLLTPFRPAIVRRQVYFPDRRLIQFDCGKLQELAGLLRRLKSEGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGSYNTEFFKKLDPMELFSGHRTVSLKNIEVVKNSNVTEVQLSNADVEAALQNVEDEADYMALKKVEEEEAVDNQEFTEEAIVSKELVATSNVSNPLKEQAITFASKEDDIDMLADVKQMAAAAAAAGQAILSFESQLRPIDRYAVRFLELWDPIIDKTAIESQGHFEETEWELDRIEKLKEDMEAEIDDDEEPLVYESWDTDYATEAYRQQVETLAKHQLKEELEAEAKEKELAEYENSMGHTSSVPKTKSKKKAKKTKFKSLKKGGLASERQSLKEESSIELMPIDDDNLSSEPVTTPDSAQEKKRKLPRYDEDVKGAKKSKKMKKSSEVSSLVIHSTYLGKRQVESKELKQYDVGTMNIELKPISRSKMGGKVLVSPIPVKRVFSIKSERPIRKGKTWSKDYFPSADSWLQQEDAVLCASVHEYGPHWSLVSDILYGMTAGGAYRGRYRHPLHCCERFRELVQRYVLSAADNVNDRSNNTGSVKGLLKVTEGRDLSKNETIGDSVTGENVRLVLDIASEIPDHEPLVQIHFFALLSSVWKVQKNLKKTFSSSQNGFFHSGSLFSPIMNRVSTNHSMGPPIRRFSNSSLCTKLVAIALSDQQSAQSDERVRICDQREEVSFPSEHLDITLEFGAEKDDKTIPLLHPVTVKILGPESSLFPRMTTAEHHHFKSSQIMAENRFWAASSSEVCLDWASLAFPIRDAKSRTPLKSQFLGKHKPSDSVKVSKSKSRKILMESSDVGHTKDQLFPPMPSVSDDSCPTADVGFSFLTESGNDFEDRTLLDLNPIFNAGSEDVLRHDYVPEFISGLDDWSVFPEFTDIG