Gene Details:

  • Gene ID: Solyc01g088800.3
  • Suggest Gene Name: HNRNP R-LIKE PROTEIN
  • Description: putative flowering gene
  • Species: Solanum lycopersicum
  • Source: Putative flowering gene from PlantCFG

Protein Features:

Functional Descriptions:

  • RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.

Homologous

Sequences:

CDS Sequence
  • >Solyc01g088800.3
    ATGCTACAACAACTGGAACAAAGTTCATCAAATGTGTTACTGTTGGAGATGGTGCTGTTGGAAAAACTTGTCTTCTCATCTCCTACACTAGCAACACTTTCCCCACTTGCCAATGTTAATGTTGATGGGAAGATTGTGAATCTTGGCCTGTGGGATACTGCTGGTCAAGAGGATTATAACAGGCTTAGGCCTCTTAGTTATCGAGGAGCCGATGTCTTCCTGCTTGCTTTCTCTCTCATAAGTAGGCCTAGCTTTGAAAACATATCAAAAAAGGGTGAAGAACTGAAAAAACAAATAGGCGCAGTGGCTTATGTTGAGTGCAGTGCTAAGACGCAGCAGGGGATGGAGAAATATGAGCTTGAAGAAGCTTTAAAAAGAGCATCAATGGCGGAAAAAACAGTAATTATTACAGTGATAAACAAAGCTTACGTGGAGCTGTATAACGGCGAGTATCCATCGATGTTCGATCTATTTTTGGAGGGATTTTGGGAAGGAGAGAGTACAAGGGTATTATTGGAACATTTACTAGTCGTAGCTGTGGATCAGACGGCGTATGAACGGTGTAAGTTCCGGCGACTTCATTGTTACCGGTTAGTCACCGGTGACGGAGATTTCGCCGGAGAGAAGATTTATATGTCGGAGGAGTTTATTAAAATGATGTGGAGAAGGACACGGTTTTTGATGGAGGTGCTTAAACTTGGTTATAATTTCATATTTACGGACACAGATATAATGTGGCTAAGAAATCCATTTTTATTGCTAAACAAGACCAAAAATTTGGATTTACAAATGAGTACTGATAGGTTCAATGGAGACTCTTTCTCCTACTCAAATTCCATCAATACAGGGTTTTACTATGTGAGGTCCAACAGAAAAACCATCACATTATTCGAAATATGGTACGCGATGAGGAGGAACTCAAAGGGCATGAAAGAACAAGACGTGTTAGCCAAAATGTTACGCGAAGGCGTGAATAAGGAACTCCATCTTAGAATGAAATTCTTGGACACCCTTCGTTTTGGTGGTTTCTGTAGCAATAATAAAGACGTCACGTTAGTTATGACCGTTCACGCTAATTGTTGCCGGACCATTGAAGCTAAAGTGGCTGATTTGAAGAATGTATTAGTGGATTGGAAGAGATTCAAGGAGGGTCATGTTGCTGCTGAATCAAAACCGGTAGCTGACCGAAAAGCCGAGCCCGAGAAACCAGTGAAATCTGTGGAGAATCGGGTTGTTGCTGAGAAGAAGGACGATGTGAAGGAGTCAGTTGATGAATATGAAAAAGGCGAGCGATTAGATTTGGAGGATAATGATCCTGAATTTGAGCCTGAAGAGTATGGTGGTGTTGATTATGATGAGAGAGGAATTGAACATGAGGATGTTCAGGAAGAGGATTATGAAATAGAGGATGATCCGCAAGAGGGAGATGATGGTGAAGAGGAGGGGGGTGATATGGTTGAAGAGCATGAGGAAATTGAGGGTGAGGAAGAAAATGAGCGTGCATCTGGGGAGGAACATGAGCATGCTGAGATGGTTGATGCAGCTGAGGATGCAGAACATCACGAAGTTGCTAAAGAAAGACTTAAGAGGAAGGAATTCGAAATTTTTATTGGTGGCTTGGACAAGGATGCTGTTGAGGATGACCTCAGGAAAATTTTCAGTCAAGTTGGTGAGGTAACGGAAGTGAGACTCTTGATGAATCCTCTGACTAAGAAGAATAAAGGATTTGCATTCCTGCGTTTTGCAACAGTGGAACAAGCTAAACGAGCTTGTATTGAGCTGAAAAATCCAGTGGTGAATGGCAAGAAATGTGGTGTTTCCCCAAGTCAAGATAGTGATACCCTATTCTTGGGCAACATATGCAAATCCTGGACAAAAGAAGCTTTAAAAGAGAAGTTGAAGCATTATGGCATTGATAATGTTGAGGATTTGACATTAGTTGAAGACACTAATAATGAAGGAATGAATCGGGGATTTGCTTTTTTGGAGTTCCCGTCACGCTCAGAGGCCATGGATGCTTTCAAACGTCTACAGAAGAGAGATATTGTGTTTGGAGTTGATAGGCCTGCAAAGGTTTCTTTTGCAGATTCATTCATTGACCCTGGAGATGAAATTATGGCACAGGTTAAAACAATTTTTATTGATGGTCTATCTGCATCTTGGGATGAGGATCGCGTGCGAGATTTACTTAAACAATATGGCAAGATTGAAAAAATTGAGCTTGCTCGTAATATGCCTTCTGCCAAGAGAAAGGATTTTGGATTCGTCTCCTTCGACACTCATGATGCTGCAGTCATTTGTGTCAAGAGCATTAATAATGAAGAGTTGGGGGAAGGAGATAAGAAGGTCCGTCTTTTTTGTCTTGAATCTTATCTGAACATGTCCTTCTTGTGCGTGCGTGCTTATAGTTGTATATTCCAGGTCAAAGTTAGGGCCAGATTATCACGACCACTTCAGAGGGGAAGAGGGAGATATGGTGCGCGTGATCTGCGACCTAGACGTGGGATGATGCGTGGCCCCCCTGCTCCTTGGGGTCGTCCAGTCTCTCGCCGACTCCCTGTTCGTGGATCTAGAGTTGGTTCACGTGTCCCTCCACTTGGGGATCGTAGTTTTAAACGACCTGTCACAATGAGGGATAGGCGACCAGTTATGGCCCCTAGGGGCAGACCTATGTCTCCACTATCCAGCAGGTCCTATGACAGGAGGCCACCTGTTCCTTCATATTCAAAGAGTAACTTGAAGAGGGAGTATGCACGACATGAGGAAATTCCTCCTCCTAGAAGCAGATCCACAGTGGATTATCCTTCTAGGTTTCCTTCCGACAGACGTGTTTCCTACAGGGATGACTATTCCTCTCGTAGCTCGGCATACTCTGATTTTCCTAGAGGTACTGCTCGCACAACGACAAGGAGAACTTATGTTGATGATGATTATGAACAGCGGTATGAAAGGCCTCCTCCTGCGTATCGTGAGGGCAGAGGTAGGGAATATGACTCCACGTCGGGCTCCAAACGTTCATACAGTGCAATGGATGATGTTCCTCCCCGCTATGCTGATGCAGGACCCCGCCCTTCTCGTGCTCGTTTGGATTATGAACTTGGTGATGCTAGTGGCGCACAATATGGGGATTACAGTGACAGTAGGCTAGGGAGATCAAATGCTGGATATAGTGGCAGCCGGAGTTCCCTTTCTGGTCAAGATTCTCATGGAATGTATAGCAGTCGTCAAGGAGGCTATGGTGGAGGCTCCTATGATGGCAGTGGTGTCAGTGGAATGTATTCATCTGGCTATGGTGGCGATTACATGTCTCGTAGCAATGATGTTGCTGGTAGCTCTTATTCATCAGCCTATTCCAGCCGTAGCATGGGTGGTAGTGGTTATATGGGCAGTGGTGATTCTGGATCTTATTACTAA
Protein Sequence
  • >Solyc01g088800.3
    MLQQLEQSSSNVLLLEMVLLEKLVFSSPTLATLSPLANVNVDGKIVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRPSFENISKKGEELKKQIGAVAYVECSAKTQQGMEKYELEEALKRASMAEKTVIITVINKAYVELYNGEYPSMFDLFLEGFWEGESTRVLLEHLLVVAVDQTAYERCKFRRLHCYRLVTGDGDFAGEKIYMSEEFIKMMWRRTRFLMEVLKLGYNFIFTDTDIMWLRNPFLLLNKTKNLDLQMSTDRFNGDSFSYSNSINTGFYYVRSNRKTITLFEIWYAMRRNSKGMKEQDVLAKMLREGVNKELHLRMKFLDTLRFGGFCSNNKDVTLVMTVHANCCRTIEAKVADLKNVLVDWKRFKEGHVAAESKPVADRKAEPEKPVKSVENRVVAEKKDDVKESVDEYEKGERLDLEDNDPEFEPEEYGGVDYDERGIEHEDVQEEDYEIEDDPQEGDDGEEEGGDMVEEHEEIEGEEENERASGEEHEHAEMVDAAEDAEHHEVAKERLKRKEFEIFIGGLDKDAVEDDLRKIFSQVGEVTEVRLLMNPLTKKNKGFAFLRFATVEQAKRACIELKNPVVNGKKCGVSPSQDSDTLFLGNICKSWTKEALKEKLKHYGIDNVEDLTLVEDTNNEGMNRGFAFLEFPSRSEAMDAFKRLQKRDIVFGVDRPAKVSFADSFIDPGDEIMAQVKTIFIDGLSASWDEDRVRDLLKQYGKIEKIELARNMPSAKRKDFGFVSFDTHDAAVICVKSINNEELGEGDKKVRLFCLESYLNMSFLCVRAYSCIFQVKVRARLSRPLQRGRGRYGARDLRPRRGMMRGPPAPWGRPVSRRLPVRGSRVGSRVPPLGDRSFKRPVTMRDRRPVMAPRGRPMSPLSSRSYDRRPPVPSYSKSNLKREYARHEEIPPPRSRSTVDYPSRFPSDRRVSYRDDYSSRSSAYSDFPRGTARTTTRRTYVDDDYEQRYERPPPAYREGRGREYDSTSGSKRSYSAMDDVPPRYADAGPRPSRARLDYELGDASGAQYGDYSDSRLGRSNAGYSGSRSSLSGQDSHGMYSSRQGGYGGGSYDGSGVSGMYSSGYGGDYMSRSNDVAGSSYSSAYSSRSMGGSGYMGSGDSGSYY