Information report for SIN_1017396
Gene Details
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Functional Annotation
- Relative of Early Flowering 6 (REF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a positive regulator of flowering in an FLC-dependent pathway. REF6 mutants have hyperacetylation of histone H4 at the FLC locus. REF6 interacts with BES1 in a Y2H assay and in vitro. REF6 may play a role in brassinoteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. It is most closely related to the JHDM3 subfamily of JmjN/C proteins.
Homologous
- Arabidopsis thaliana — AT3G48430
Sequences
CDS Sequence
- >SIN_1017396
ATGGCTGCAGAGGTAAGTGGTGGTGGGAATATTGAGGTTTCTCCATGGCTGAAATCTATGCCAGTGGCACCAGAGTATCACCCTACTTTGGCTGAGTTTCAAGATCCAATTGCCTACATTTTCAAGATTGAGAAGGAGGCCTCAAAGTATGGTATTTGCAAAATAGTCCCCCCAGTGCCTGCAGCTTCCAAGAAAACTGTTATTGCTAATTTGAACAAGTCCCTTTTGGCCCGGTCCACTGACCCGGAATCAGGTCCGACTTTCACCACGCGGCAGCAGCAGATCGGTTTTTGCCCGAGAAAGCACCGCCCTGTCCAGAAACCCGTGTGGCAGAGTGGGGAGAAGTACACCCTTACTGAATTTGAAGTCAAGGCCAAGAATTTCGAGAAGATTTATCTCAAGAAGTATGCCAAAAAGGGGTTGAATGCTCTGGAAATGGAAACTGTTTACTGGAATGCCACGGTTGATAAGCCCTTTCAGGTGGAGTATGCAAATGACATGCCGGGATCGGCTTTTGTGGCACAGAAGGGTTGTGGGAAGAAGAATGAGAGTACAATTACTGTGGGTGAGACTGAGTGGAATATGAGGAGAGTGTCAAGAGAGAACTTGTCGCTATTGAGGTTCATGAAGGAGGAAATCCCAGGAGTAACTTCGCCAATGGTTTATGTTGCAATGATGTTTAGTTGGTTTGCTTGGCATGTTGAGGATCACGACTTGCACAGCTTGAATTATTTGCATATGGGTGCGGGGAAGACATGGTATGGTGTGCCGCGGGAGGCAGCTGTTGCCTTTGAAGAAGTGATCAGGGAGCATGGATATGGTGGGGAGATAAATCCTCTGGGTTGCCATGTCAACAGGGTGCAAGTTCAGTATATAGAAGTGATGCTTCTTTGCATGGATCCTTCTCACCCCAAGGTTACATTTGCTACACTTGGTGAGAAGACCACAGTGATGTCCCCGGAAGTGCTTCTTAGTGCTGGTGTTCCATGCTGCAGGCTGGTGCAAAATGCGGGGGAATTTGTTGTCACTTTCCCAAGAGCTTATCACTCGGGGTTCAGTCATGGATTTAATTGTGGAGAGGCTGCTAATATTGCTACTCCTGAATGGTTGAGGTTTGCAAAAGAAGCTGCAATACGTAGGGCAGCTATTAATTGTCCTCCAATGGTGTCTCACTTCCAGTTGTTATATGATCTAGCACTTTCCTTATGTTCTGGAGTTCCGAAGAGCATTGCTATGGGACCCCGGAGTTCTCGGCTAAAAGATAGAAAGAAAGGGGAAGGAGAAATGTTGATCAAAGAACTATTTTTGCAGGACATGATGCAGAATAATGATATGCTTCATAGTCTTGGCAAAGGATCATCTATTGTGCTCCTTCCTCAAAATTCTCTGAGTCACTCGATTTATAACAACACATCATCTGGATTCCAGTCGACAGCCAAATCTAGGTTATTCCCCAGTTTATGCAGTCCCGATCTTGAGTTGAAGACTGCAAGCTATGATGCTCGTGATGAATTTTTGCTAGACAGGAAGCATGGAATAAAACAACCTAGAGGACATGCTGTGAATAGAAAATCAGTTTCTTCTTTGTGTAGTAGTAGTGAGGTTCCTTCTATGGCTCCTTGTGCAGAGCAGATAGATTCTGAAATAAAGAGAGCTTCTCAACATGAGCAGGGACTATTTTCATGTGTCACTTGTGGGATCTTGTGTTTTGCTTGTGCTGCTATTGTCCAACCGACAGAAGCAGCTGCTCATTACCTAATGTCAGCTGATTGTAGCAAATTTAGTTATTGGGGTACAGGTGATGATGACCATAATCACACCAGACATGCAAAGTCTCCCAACACAAACCTTGGTTCAGGGTTGGTGCTTAGAAAGAAACATGGCCCTTCTGATGTGCCAATATCTGCAGATCAGATTCGATCTGTGAATGGGGAGAGTGTGGGGGTGGTCTCCAATAGCAAGGCACATAAAGAGCCCTCATCACTTGGCCTATTAGCTTTAACATATGGTAATTCTTCGGACTCCGAGGAGGAAGAGACTGAAGCTGATCTTCCTGTTGATGGCTGTGGAACCAGTAAAAGCGATAGCCCTGAAGATGGACATGCTTGTGACAATATCGATTCAAAACTTAACTGCCGGAAGGAAATGTCTTCACAAATTTCTGATTCTAATGCAATGTTTGGCCCACCTATAGCGAAGTGCAACGGTGGAGATCCCCAAAGTTCTAACTGTTCTGATGAGTTTCCAACGGACAATTGTACTGTGGTTGAGTCAAATTCTTGTACCCATAGGTCTAGACATCGAACGAAATCACGACATGACACCTCAAATTCTTTAACCCATAAGACTGAAGCAACAGTTAGTACTGGTTTGACACCATTAGAGGACAAAAATACACCTTTTCCTGCAAGATCTGATGAAGATTCTTATCGCTTGCATGTCTTCTGTCTTCAGCATGCTCTGCAAGTAGAAAAGCGACTCAGTCAGATTGGTGGAGCCAATGTGTTTCTTGTGTGTCATCCAGATTTTCCTAAATTAGAATCTCAAGCAAAGAAAGTTGCGGAAGAATTGGAAAGTGATTGGCTCTGGAGTGAAATCTCATTCCGGGAGGCAACTGAGGAGGACGAAGAAATTATGCGGCTAGCTTTAGAGAGTGAAAATGCCATTCATGGCAATGGAGACTGGGCTGTGAAAATGGGCATCAACCTCTTCTTCAGTGCCAATCTTAGCCGCTCGCCTCTCTACTCTAAGCAGATGCATTTCAACTTTGTTATATACAGTGCCTTTGGACGCAGTTCTCCAATTGATAGCTCTGCGGCATTAGATGAGCTGGAAGGAAAGTGTGTAGGCAGGCAAAAGAAGATAGTTGTTGCTGGAAAATGGTGTGGCAAAGTTTGGATGTCGAGTCAAGCTCACCCACTGCTCCTTAACAAGGATTCGCAAGAACAGGAGGAGGAGTCAGAATTTACTGCCTGGATCAAGCCGAATTTGAAGTCTGAGAGATTATCACAAAGCAGCCAAGCAGCTGGAGTGGCGTCTGCGATTTGCAAAACCAGTAGAAAGAGAAAGAATAATGCAGAAAATAGCTCACACGTGAAAGAAAAATCTCTTGAGGCTGGAAAAATGGATGAACCTTCTATAGGCTTTCCACTCAGTAACTGCAATAAGGTAATTAAAAGAAAGCGTGGATCCAGGAGATTGAAGGAAGAGAATCCCGAGTCTGAAGATTTAGATGAATCATCTGAAGAAATTCAACTCAGTAACTCTTGCAATCAAATTAAGAAAAGGCATGGAACCAAGCTACTGAAGAAAGATACTTTTGAGGCCGATGAAAATTTAGATGCGTCTTCAGAAGATTTTCCACTCAGCAACTCTTGGAAGCAAATTAAGAGTAAACGTGGAGCTCGGAAAACGAACAAGGAGACTCCTGAGCCACTGAAAAGTAAAAAGAGAAGCAAGCAACAAGCTAACTCACTTGTTGATGATGATGAGCTCGAAGGTGGTCCAAGCACACGACTGAGGAAACGAACAACAAAGGCTTGTAAAGCCTCAGGACCCAGGTCGACTAATGCAAAACCAGTACTAAAGAAGCAGCAAAAAGATATCAAGACAAAGAAAGTTCCACCTGTCAAGGTTCCTTCTAAGGCAAAACTTAAAGACGAGGAAGCAGAGTACGCATGTGACATGGAGGGATGCACAATGAGTTTCGGGTCGAAGCAGGAGCTTGCTTTGCATAAAAAGAATATCTGCCCGGTGAAGGGATGTGGTAAGAAATTCTTCTCTCACAAGTATCTGGTGCAGCATCGACGTGTTCACATGGATGACCGTCCTCTGAAATGTCCTTGGAAAGGCTGCAAAATGACGTTCAAGTGGGCGTGGGCTAGAACCGAACACATTCGAGTCCATACAGGGGCTCGACCTTATGTTTGCACCGAGGCTGGCTGTGGCCAGACATTCCGGTTTGTGTCTGATTTCAGTCGTCACAAGCGCAAGACTGGTCATTCTCCAAAGAAAGCCAGAGGATAA
Protein Sequence
- >SIN_1017396
MAAEVSGGGNIEVSPWLKSMPVAPEYHPTLAEFQDPIAYIFKIEKEASKYGICKIVPPVPAASKKTVIANLNKSLLARSTDPESGPTFTTRQQQIGFCPRKHRPVQKPVWQSGEKYTLTEFEVKAKNFEKIYLKKYAKKGLNALEMETVYWNATVDKPFQVEYANDMPGSAFVAQKGCGKKNESTITVGETEWNMRRVSRENLSLLRFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPREAAVAFEEVIREHGYGGEINPLGCHVNRVQVQYIEVMLLCMDPSHPKVTFATLGEKTTVMSPEVLLSAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEAANIATPEWLRFAKEAAIRRAAINCPPMVSHFQLLYDLALSLCSGVPKSIAMGPRSSRLKDRKKGEGEMLIKELFLQDMMQNNDMLHSLGKGSSIVLLPQNSLSHSIYNNTSSGFQSTAKSRLFPSLCSPDLELKTASYDARDEFLLDRKHGIKQPRGHAVNRKSVSSLCSSSEVPSMAPCAEQIDSEIKRASQHEQGLFSCVTCGILCFACAAIVQPTEAAAHYLMSADCSKFSYWGTGDDDHNHTRHAKSPNTNLGSGLVLRKKHGPSDVPISADQIRSVNGESVGVVSNSKAHKEPSSLGLLALTYGNSSDSEEEETEADLPVDGCGTSKSDSPEDGHACDNIDSKLNCRKEMSSQISDSNAMFGPPIAKCNGGDPQSSNCSDEFPTDNCTVVESNSCTHRSRHRTKSRHDTSNSLTHKTEATVSTGLTPLEDKNTPFPARSDEDSYRLHVFCLQHALQVEKRLSQIGGANVFLVCHPDFPKLESQAKKVAEELESDWLWSEISFREATEEDEEIMRLALESENAIHGNGDWAVKMGINLFFSANLSRSPLYSKQMHFNFVIYSAFGRSSPIDSSAALDELEGKCVGRQKKIVVAGKWCGKVWMSSQAHPLLLNKDSQEQEEESEFTAWIKPNLKSERLSQSSQAAGVASAICKTSRKRKNNAENSSHVKEKSLEAGKMDEPSIGFPLSNCNKVIKRKRGSRRLKEENPESEDLDESSEEIQLSNSCNQIKKRHGTKLLKKDTFEADENLDASSEDFPLSNSWKQIKSKRGARKTNKETPEPLKSKKRSKQQANSLVDDDELEGGPSTRLRKRTTKACKASGPRSTNAKPVLKKQQKDIKTKKVPPVKVPSKAKLKDEEAEYACDMEGCTMSFGSKQELALHKKNICPVKGCGKKFFSHKYLVQHRRVHMDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCTEAGCGQTFRFVSDFSRHKRKTGHSPKKARG