Information report for SIN_1002893
Gene Details
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Functional Annotation
- Encodes an RNase III-like enzyme that catalyzes processing of trans-acting small interfering RNA precursors in a distinct small RNA biogenesis pathway. The protein is also involved in the production of 21-nt primary siRNAs from both inverted-repeat constructs and endogenous sequences, as well as the RDR6-dependent 21-nt secondary siRNAs involved in long-range cell-to-cell signaling. It binds DRB4, a ds-RNA binding protein.
Homologous
- Arabidopsis thaliana — AT5G20320
Sequences
CDS Sequence
- >SIN_1002893
ATGGTCCTTGTTATGACTCCTCAGATATTGCTACATAATCTGTCACATTGCTTTATCAAGATTGAATTTATCTCGCTTCTGATATTTGATGAGTGTCACTATGCCCAACTTGAAAGCAATCATCCTTATGCTGAAATCATGAAGATCTTCTACAAAATGGATGTCGCAAAACTTCCTCGGATTTTTGGCATGACTGCATCTCCAAAATTAGGAAAAGGTGGCTCGATTGATGGTCTTGAAGCGTTGCTGCGAGCAAAGGTTTATTCTGTTGAGGATAAGGATGAACTGGAAAAATTTGTTACATCCCCAAAAGTAAATGTGTACTATTATGGTTCGAATGAGAATAGCAATTCTTCCCCTCACATGATCTATACTGTCAAACTTGAGGAGATAAAGCACCAGTGTATGTTGGCACTTCGGATGAACTTGCTTGATCCTATTATTCTCAGGAGCACCAAAAAGTTGCTTCAAAAGCTGCATTGTAATTTAATATTTTGTCTAGAGAACCTTGGATTATGGGGCGCTTTACAGGCCAGCTACATCTTCCTAAAGGGTGATTATTATGAGAATACCGAACTGGTGGAGGCAGAAGAGAGTTGCACAGATGGCAACTTATGCAACAAGTATTTGCATCAGGCTGCTTCAGTCCTTGCTACTGATTGCATGGGAGATGGCATGGAAGCTGATTTGTCCTGCGTAGATGTTTTGAAGGAGCCTTATTTTTCAAGAAAGCTCTTACGGCTTATTGGAATTCTATCCAGCTTCAGGATTATGAGTGTAGAAAGTGATGAAGAAGTAAGTTTGAGGTACAAATGCTATACAGGGAATTACCATGAAGAGAAGATTGTCACTGCAAGATCCCTCTCGTATATATTGCGGAATCTAAAGTTTTTAAATTCTTGGAAGTGCGGCTTCCTCGTTGGAGTTCATGCTGGACTTGTTTCACGTAAAAGTACAAACATCATTCTTGAGAAGTTCCGTTCTGGTGAGCTGAATCTGTTGGTTGCAACAAAAGTGGGTGAAGAGGGACTAGATATTCAGACATGTTGCCTTGTAATACGCTTCGATCTTCCTGAAACAGTTTCAAGTTTTATTCAATCTAGAGGTCGTGCACGTATGCCCCAATCTGAATATGCATTTTTGGTTAACAGGGGAAACCTAAGAGAACTCAATTTGATTGAACATTTTAAAAAAGATGAAGCTCAGATGAATGAAGAAATTTCCTTGAGAAAATCTCATACACCAATAACCGACTTTGAGGAGATAACCTATAAAGTGGATAATACTGGGGCCACTATCAGTTCTATATTGAGTATCTCGTTGCTGCATCGCTACTGTTCACAACTTCCTCATGATGAGTATTTCAACCCAAAGCCCCAGTTCTTTTACTATGACGATGCAGATGGAATGGTTTGCAACATAATTCTCCCAGCCAATGCTCCAATTCATCAAATTGTCAGCTCACCACAACCTTCAACAGAGGCTGCTAAGAAAGATGCCTGTTTGAAAGCATGCAAGGCACTACATGAAGTTGGAGCATTGACTGATTATCTTTTGCCGGAGCAAGATGATAAATATGACGAATCGTCTGAGGAGTTATGTGATTCTGATGGCACCGATGAGGACGAATCACGAGCAGAACTGCATGAGATGCTTGTCCCAGCAGCCCTTAGGAAACCGTGGCGAGAAGTGGAGAATTCCACTTACTTTTATTCGTACTACATCAAGTTTTGTCCTAATCCTGTAGACAGAGCATACAGAAGGTTTGGTCTTTTTATGAAAGAGCCACTTCCAGAAGAGGCTGGGAAAATGAAAGTTGATCTTTGTTTGGCCCGTGGTAGAATGGTGATGACTCAGCTTATTCCATCTGGAACTGCTAGATTTGACAAAGATGAGATCGCCGCAGCTGAAATGTTCCAGAAAATGTTTCTCAAAATTATTCTTGATCGGCATCAATTTATACCAGAATACGTCTCACTCGAAAATAATGATGTCTACGAGTTGAGTTCCTCAACCTGCTACCTGTTGCTTCCTGTTATCCAGCATGAGGATGATAAAATCTCTGTAGACTGGACACTGGTCAACAGATGTTTGTCATCTCCAATTTTCAGACACCCTGGCATTGGCGGGGGTGATGAGACCTCTCAAGTTAAAAACTATTTGCATCTTGCCAATGGTCAGAAAAGTGTACATGACGTTGTGAACAGTTTGGTGTATGTCCCTTGCAAAGATATATTTTTCTTCATTTCGGATATTTTGCCAGAGAAAAGTGGATACAGCTTGTATAATGACTCAAAAAGTCATGTGGAGCACTACACTGAAATGTTTGATATTCATCTTTCATACCCTGATCAACCCCTTTTGAAAGCCAAACAGCTTTTTGTTTTGGACAACTTACTGCGAAAGAAGAAACATTCAGAAGAATGGCGAGAGAAAGAGGAACACTTCATTGAATTGCCTCCCGAAATTTGTCAGTTGAAAGTTATTGGTTTTTCAAAAGATATTGGAAGTTCATTGTCCCTGTTACCATCAATTTTGCACCGACTTGAAAGCTTTCTTGTGGCCATTGAGTTGAAGGAGAAATTGGTTGCTTCATTCCCTGAGGGAGCAGAAGTTACTGCTGAACGTATTCTTGAAGCTCTCACAACAGAAAGATGCTATGAACACTTTTCTCTTGAGAGGCTTGAAGTGCTTGGAGATGCATTTCTCAAGTTTGCAGTTGGTAGACATCTTTTTCTCAAGCATGATGCCTTAGATGAAGGACAACTAACTAGAAAGCGTTCCAACATTGTCAACAATTCTAATTTACTCAAGCTGGCGACAAGGAACAATTTACAGGTATATATACGCGATCAGTCATTTGAGGCTGACCAATTCTTTGCATTTGGCCGTTCTTGTTCTATAAGTTGCAACAAGGAAACTGAGAAAACAATTCACCCTCGGAGTTATGACAAGAAAAATAGTGCAAATGCCGAAGTAAGATGCAACAAATGTCATCACTGGTTGCATAACAAGACTGTTGCAGATGTTGTTGAGGCACTTGTTGGAGCTTTTATAGTTGACAGTGGCTTCAAAGCTGCAACTGCATTTCTTAATTGGCTCGGCATAGAAGTAGATTTCATGCGTTCGGAGATTGATAATATCTGCTCTGCTAGCAAGGCATTTCTGCCACTTGCTGATCAGATGGATGTTAATGCCCTTGAAGATCTTCTAGGATACAAGTTCGCCCACAAGGGTTTGCTCATTCAGGCCTTTGTTCATCCATCTTTCAACAATCATTTGGGAGGTTGTTACCAGAGACTTGAATTTCTTGGAGATGCTGTCTTGGATTATTTGATCACTTCCTATCTGTATTCGGTGTATCCGAACTTAAAACCAGGCCAGTTAACAGATCTAAGATCAGTATCAGTGAACAACATTTCATTTGCTGATGTGGCTGGAAGATGGTCCTTTCACAAATTTATTATTTGCGATTCTAGTGTTCTCCGTGAAACAATGACCAAGTATGTGAACAACATTGGAAGCTCAGCAACAGGGAAAGGGCGCATTGAAGAGAAAACTTGCCCAAAGGCTCTTGGTGACTTGGTCGAGTCTTGTATGGGCGCCGTATTTCTTGACACAGGATTCGATTTGAACCATGTTTGGAAGATAATGCTGTCCTTGCTGGACCCTATTATTAGTTTCTCGAAGCTGCAAATGAATCCTCTTAGGGAACTTCATGAACTCTGCCAATCCTATAACTGGGAGGTGCAGTTTTCTTCTTCAAAGAGAGACGGAAAATTCATAGTTGAAGCTAAAGTGGATGAAGGAAAGGTCTGTGCCACTGCTTCAGCCACCAACATCAGCGGAAAGGTTGCCAGGAGAATGGCTGCAAGACAACTATCCGAGTGTCTGAAGGCTCAAGGTTACAAATCCAAAACAAAGTCACTGGAGGAAGTGCTTAGAAAAAGTAAAAAGATGGAAGCTGAATTGATCGGATATGATGAGAAGCCATGTTATGGAACTGCTGAATTTGGTGGGCTGAAACTGCTGGAAAATTCTCAAAGTGATCATGATGTAAAAGTGTATGCTCTTAGTGAGACATCAACCAGTAAATCTCGTACCATTCCCAAACCTATCAGGGATCGTCCTTTTGCACACGAAGCTTCAGAATTCCACAACATTAAAAGTAACGACTACATAATTGATTCACCTGACATCCATCTAACTAATGGCTGTGATGCTGATCCACAGGGAACAGGTGCTTCTCTGACTGTGTCGGCAAAATCACGTCTCTATGAAATATGCGCTGCTAACTGCTGGAAACCACCTCTTTTTGAATGTTGGAAGGAGACGGGACCAAGCCACATAAAGGAATTCATTTTCAAGATTGTGATGGAAATTGAAGAACTGCCAAACCAGATATTCGAGTTCTACGGAGAACCTCGAATGAGGAAGAAGGATGCTGCTGAGCATGCAGCACAGGGCGCGCTTTGGTACCTAAAGCAAGAAGGGTATATTTGGGATAAAAAGCTGGACCGCTGA
Protein Sequence
- >SIN_1002893
MVLVMTPQILLHNLSHCFIKIEFISLLIFDECHYAQLESNHPYAEIMKIFYKMDVAKLPRIFGMTASPKLGKGGSIDGLEALLRAKVYSVEDKDELEKFVTSPKVNVYYYGSNENSNSSPHMIYTVKLEEIKHQCMLALRMNLLDPIILRSTKKLLQKLHCNLIFCLENLGLWGALQASYIFLKGDYYENTELVEAEESCTDGNLCNKYLHQAASVLATDCMGDGMEADLSCVDVLKEPYFSRKLLRLIGILSSFRIMSVESDEEVSLRYKCYTGNYHEEKIVTARSLSYILRNLKFLNSWKCGFLVGVHAGLVSRKSTNIILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVNRGNLRELNLIEHFKKDEAQMNEEISLRKSHTPITDFEEITYKVDNTGATISSILSISLLHRYCSQLPHDEYFNPKPQFFYYDDADGMVCNIILPANAPIHQIVSSPQPSTEAAKKDACLKACKALHEVGALTDYLLPEQDDKYDESSEELCDSDGTDEDESRAELHEMLVPAALRKPWREVENSTYFYSYYIKFCPNPVDRAYRRFGLFMKEPLPEEAGKMKVDLCLARGRMVMTQLIPSGTARFDKDEIAAAEMFQKMFLKIILDRHQFIPEYVSLENNDVYELSSSTCYLLLPVIQHEDDKISVDWTLVNRCLSSPIFRHPGIGGGDETSQVKNYLHLANGQKSVHDVVNSLVYVPCKDIFFFISDILPEKSGYSLYNDSKSHVEHYTEMFDIHLSYPDQPLLKAKQLFVLDNLLRKKKHSEEWREKEEHFIELPPEICQLKVIGFSKDIGSSLSLLPSILHRLESFLVAIELKEKLVASFPEGAEVTAERILEALTTERCYEHFSLERLEVLGDAFLKFAVGRHLFLKHDALDEGQLTRKRSNIVNNSNLLKLATRNNLQVYIRDQSFEADQFFAFGRSCSISCNKETEKTIHPRSYDKKNSANAEVRCNKCHHWLHNKTVADVVEALVGAFIVDSGFKAATAFLNWLGIEVDFMRSEIDNICSASKAFLPLADQMDVNALEDLLGYKFAHKGLLIQAFVHPSFNNHLGGCYQRLEFLGDAVLDYLITSYLYSVYPNLKPGQLTDLRSVSVNNISFADVAGRWSFHKFIICDSSVLRETMTKYVNNIGSSATGKGRIEEKTCPKALGDLVESCMGAVFLDTGFDLNHVWKIMLSLLDPIISFSKLQMNPLRELHELCQSYNWEVQFSSSKRDGKFIVEAKVDEGKVCATASATNISGKVARRMAARQLSECLKAQGYKSKTKSLEEVLRKSKKMEAELIGYDEKPCYGTAEFGGLKLLENSQSDHDVKVYALSETSTSKSRTIPKPIRDRPFAHEASEFHNIKSNDYIIDSPDIHLTNGCDADPQGTGASLTVSAKSRLYEICAANCWKPPLFECWKETGPSHIKEFIFKIVMEIEELPNQIFEFYGEPRMRKKDAAEHAAQGALWYLKQEGYIWDKKLDR