Information report for SIN_1002242
Gene Details
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Functional Annotation
- Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.
Homologous
- Arabidopsis thaliana — AT1G01040
Sequences
CDS Sequence
- >SIN_1002242
ATGGATAAAGAGGAGGGTAGGGATTCAGTTAATTCTTGTACTCATGCTGCTGATGGCAGACCGTCATACTGGCTAGATGCCTGTGAGGACGTGTCATGCGATGATTATTTTGTTGACTTTGAACCTGCAACAATTACTTCAATTCCCGAACCGGAGTCACACTCTCATGGAGGCTGCCATGTCACTTGCTTTTTTGGTGGAGATGATCGGACTGTGGACAGCATAAAAAATGGCAACTCTGATTTGCCTACTCATACAATCACTAATCCGAGCAGGAATCCACTTCAAAATTCCTGCTCCTCTGTCCAGAAAGCCCTTGTGCAGGATCAACACTCAGTGTCTAGGCCTGCAATTGTTAATTGCAATGGCAAAAGGCCTTCTTTCTATAGTAATGGGTTCACGAATGAAGAAACCGACAATGGTAAAATGCACCATGAATTTTACGACTCTGATCAAAGACATGACAAAAAGATTCGTGGTAGGGATCCAAAGAAGGAGAGGAGAATTTGGGAAAGGGCTCCTGGAAGGAAGAGACAACGTGGTTGGGATGATCCAGAGACTGATGGGCAGGTCAGAGACAAACTGAGGAGAAGAGAACGCTATAGTACAGGTAGCTGGAAGGAGAGGGACTACAGAGAAGCCAGAGGTTACTGGGAGAGGGAGAAAGAAACAAATGAATTGGTTTTTCGTGTAGGTTCTTGGGAATCTTGTAGAAACAGAGATGAGAAGGTGAACAGTCAAAAAAGCAACAAATGTACTGGATCTTCAGAAGAGAAGAAAGATGAGCCAAAAGAGAAACTTCCTGAGGAGCAAGCTCGTCAGTACCAGTTGGATGTTCTTGAGCAAGCGAAGAAGAGAAACACAATTGCTTTTCTTGAAACAGGGGCCGGGAAAACACTGATTGCTGTCCTCCTTATGAAAAGTGTTAGCACTGAATTGCAAAAACAAAATAAGAAAATGCTTGCTGTCTTTTTGGTGCCTAAAGTTCCTCTTGTTTATCAGCAAGCAGAAGTAATCCGTGAGCGAACAGGCTATCAAGTTGGCCATTACTGTGGTGAAATGGGTCAAGATTTTTGGGATGCGCGGAGGTGGCAACGTGAGTTTGAAAGTAAGCAGGTCTTAGTGATGACGGCTCAAATTCTTCTGAACATACTTAGACACAGTATAGTAAAAATGGAAGCAATCAATCTCCTTATTCTGGACGAGTGTCATCATGCTGTGAAGAAGCATCCTTATTCTTTAGTAATGTCTGAGTTCTATCACACCACGCCAAAGGAGAAGAGGCCATCAGTTTTTGGGATGACTGCATCTCCTGTGAACTTGAAGGGTGTTTCTAGCCAAGTTGATTGCGCATTAAAGATTCGCAATCTGGAGAGTAAGCTAGATGCTGTAGTTTGTACTATAAAGGACCGTGCAGAGCTGGAGAAACATGTACCAATGCCTTCAGAAGTGGTGGTAGAGTATGACAAAGCTGCTAGTTTATGGTCCCTGCATGAGCAAATAAAACAGATGGAACAGATGGTTGAGGAGGCTGCTCGGTCGAGCTCCAGAAGAAGCAAGTGGCAATTTATGGGAGCCAGAGATGCTGGGGCTAAAGAAGAGCTACGCCAAGTTTATGGTGTGTCTGAGCGGACCGAAAGTGACGGAGCTGCTAATTTAATCCAAAAATTGAGGGCCATCAACTATGCTCTTGGTGAACTAGGACAGTGGTGTGCTTACAAGGTTGCACAAGCATTTCTAACTGCTTTGCAGAATGATGAAAGGGCAAACTATCAACTCGATGTCAAGTTCCAAGAATCATACCTACAGAAAGTTGTCTCTCTTTTGCAGTGTCATCTATCTGAAGGAGCCATTTTAGAGAGTAACATTGTAGGTACAGACACGGACAGCAGTGCTGCAGATGCAGAAGGGAATGGGTCTGATGAGCTAGAGGAGGGGGAACTTACTAACAGTCATGTTGTCTCTGGTGGAGAGCATGTTGATGTGATTATTGGAGCTGCTGTTGCTGATGGAAAAGTGACTCCTAAGGTGCAGTCACTGATCAAAATACTTCTGAAGTATCAGCACACAGAGGATTTTCGTGCAATAATCTTTGTTGAACGTGTTGTGGCTGCTTTGGTTCTTCCTAAGGTTTTCGCAGAGCTTCCATCTTTGAGTTTTGTGAAATCAGCAAGTTTAATTGGGCACAACAATAGTCAAGAAATGCGAACCAGCCAAATGCAAGATACAATTGCGCGATTCCGGGATGGTCGTGTGACTGTTTTAGTTGCCACTAGTGTCGCTGAGGAGGGACTTGATATTCGACAATGTAATGTTGTCATTCGCTTTGATCTTGCCAAAACTGTATTGGCATACATCCAGTCTAGAGGTCGTGCCAGAAAGCCTGGATCAGATTACATCTTGATGGTTGAGAGAGGAAATTTGTCCCACACAGCTTTTCTAAGGAATGCTAGAAATAGTGAAGAGACTTTGCGGAAAGAAGCCATTGAGAGGACTGACATTAGTCATCTCAAGGACACCTGCGGTGTAAATTCTGGAGAGGCTATAGTTGGAACTGTGTACCAGGTGGAGTCTACTGGTGCTGTTGTGAGCTTAAATTCAGCTGTAGGACTCATCCACTTTTACTGCTCCCAGCTGCCCAGTGACAGGTATTCAATTCTTCACCCGGAGTTTATCATGGAGCGTCATGAGAAGCCCGGAAGCCCTACAGAATATTCATGCAAGCTTCAACTTCCCTGTAATGCACCATTTGAAAAATTGGAGGGACCTCCATGCAGATCAATGCGCCTCGCACAGCAGGCATGCTTCGCGTCTCATGATGTTCATTATCTCTGTGTAAACTGTATGAGAAGCATTGATTTCACTAGATTATGTGATTTGCAGGCTGTTTGTTTGGCTGCTTGCAAGAAGCTTCACGAGATGGGAGCATTTACTGACATGCTATTGCCAGACAAGGGAATTGGGGAAGAAGCTGAGAAAGTTGAACAAAATGATGAAGGGGATCCTCTTCCTGGAACTGCTAGGCATAGAGAATTTTACCCTGAAGGTGTAGCTGACATTCTCCGGGGAGAATGGATATTGTCTGGGAAAGGCTGTGATGACTCCAAGTTGTTTCATCTTTACATGTACTCTATCAAATGTGAAAATGTTGGCTTCTCCAAAGATCCCCTCTTAACTCAAGTTTCAGAATTCGCAATATTATTCGGCAATGAACTGGATGCAGAGGTGTTATCAATGTCGATGGATTTATTCATTGCTCGGTCTGTGATAACAAAGGCATCACTTGTCTTTAAAGGGCCCCTAGAAGTTAGAGAATCTCAGTTGGCATTGCTTAAGAGTTTTCATGTACGACTGATGAGCATTGTATTGGATGTGGACGTTGAGCCATCCAACACTCCTTGGGACACTGCAAAGGCATATTTATTTGTTCCTTTAGCTGGAGGTATATCTGCAGACCCAATGAATGATATAGACTGGGTTCTAGTTGAAAATGTTACGGAAACAGATGCATGGAGCAATCCCCTGCAGAGAGCTAGGCCAGATGTTTACCTTGGCACTAATGAACGGTCGCTAGGTGGAGACCGAAGAGAATATGGATTCGGAAAATTACGACATGGCATGGCCTTTGAACAGAAATCCCACCCTACTTATGGGATTAGAGGAGCTGTTGCCCAGTTTGATGTGGTAAAAGCATCTGGCTTAGCTCCTAAGCGAGATGCTGGCGAAGTGCCCTATCAAGTTGATATAACAAAAGGCAAACTGATGTTGGCTGATTCCTGTATTGAAGCAGAAAATCTGGTAGGAAGAATTATCACTGCAGCTCATTCTGGAAAGAGGTTCTATGTAGATTCTGTCCGCTTTGATATGACTGCAGAGAACTCATTCCCAAGAAAAGAAGGCTACCTTGGACCTCTGGAGTACAGTTCTTATGCTGATTATTATAAGCAAAAGTATGGGGTAGATTTGAGGTATAAACAGCAACCTCTAATAAGAGCCCGTGGTGTTTCATACTGCAAGAATCTTTTGTCTCCACGTTTTGAACATTCAGAAGGTCATGATGGTGAATCTGAAGAGATAAATGAAAAAATATATTATGTTTTTCTCCCTCCAGAACTCTGTTTTGTGCATCCACTTCCTGGATCACTAGTTAGGGGTGCACAGAGATTGCCGTCAATTATGAGGAGGGTCGAAAGCATGCTGCTTGCTGTACAGCTTAAGGATATCATTAGTTATCCAGTCCCTGCTTCAAAGATCTTGGAAGCCTTAACTGCAGCGTCATGCCAGGAGACTTTCTGTTATGAAAGAGCAGAGCTCTTGGGAGATGCTTATCTGAAATGGGTTGTTAGTAGATTTCTATTTCTAAAATATCCTCAGAAACATGAAGGTCAGCTTACTAGGATGAGGCAACAAATGGTAAGCAACATTGTACTCTATCAGTATGCATTGAACAAGGGGCTTCAATCATACATCCAGGCAGATCGATTTGCTCCATCAAGGTGGGCTGCACCTGGGGTGCTTCCTGTCTTCGATGAAGACACCAAGGAAGAAGAATTGTCATTTTTTGATCAGGAAGTCGAGTATGATGAGGGTTTGAGAAGAAAGATCCATGATGATGAGGAATATGAAGAATATGAAATGGAAGATGGGGAACTTGAGAGCGACTCAAGTTCATACCGTGTGCTATCTGGCAAAACTCTTGCGGATGTTGTGGAAGCATTGATTGGTGTATATTATGTCGAAGGTGGAAAGAACGCTGCAAATCACCTTATGAAATGGATTGGAATTGAGATTGATTTTGACTTGAAAGAGATAAATTACTCAATTAAACCGAGTACTGTCCCAGACAATATCCTGAGAACTATTGATTTTGATGCATTAGAAGGTTCCTTGAATGTCAAGTTCACTGATAGGGGATTGTTGGTAGAAGCAATAACTCATGCATCACGTCCATCTTCTGGAGTGTCTTGTTATCAGCGGTTAGAATTTGTTGGTGATGCAGTGCTGGATCATCTCATCACACGGCATCTGTTTTTTACATACACTGATTTGCCTCCAGGGCGCCTGACCGACTTGCGAGCTGCTGCTGTGAATAATGAGAATTTTGCACGTGTAGCTGTTAAACATAACCTTCATTTACACCTCCGTCATGGATCAAGTGCACTTGAAAAACAGATTCGAGATTTCGTGAAAGAGGTTCAGAATGAACTTTCAAAACCTGGGTTTAACTCTTTTGGTTTAGGGGATTGCAAAGCTCCGAAAGTTCTTGGAGATATAGTAGAATCAATTGCTGGGGCTATCTTCCTCGATAGTGGATGTAACACAGCAGCTGTATGGAAGGTCTTTCAACCCTTGTTAAACCCAATGGTTACTCCAGAAACGCTGCCAATGCATCCCGTTCGAGAGTTACAAGAACGATGTCAGCAGCAAGCTGAAGGCCTCGAATACAAAGCTAGTCGAAATGGGAACTTGGCTACTGTGGAAGTATATGTTGATGGTGTGCAGGTTGGGGTTGCTCATAATCCCCAAAAGAAAATGGCTCAAAAGTTAGCTGCTCGAAATGCTCTCGTTGCTCTAAAAGAGAAGGAGAAGGCTGAAGCCAAAGTAAATGTGGACGACGATGGGAAAGAGAAGAAGAATGGGAGCCAAACTTTCACCAGACAAACCTTAAACGATATCTGCTTGCGCAGAAATTGGCCGATGCCCCTATACAAGTGTGTGCATGAGGGCGGTCCTGCACATGCAAAAAGATTTACATTCGCCGTGCGTGTGAATACTTCTGATAGAGGATGGACGGACGAATGCATTGGCGAACCAATGCCCAGTGTGAAGAAAGCGAAAGATTCTGCTGCAGTTCTCCTCTTGGAACTTTTGAACAAATGGTATGCTTGA
Protein Sequence
- >SIN_1002242
MDKEEGRDSVNSCTHAADGRPSYWLDACEDVSCDDYFVDFEPATITSIPEPESHSHGGCHVTCFFGGDDRTVDSIKNGNSDLPTHTITNPSRNPLQNSCSSVQKALVQDQHSVSRPAIVNCNGKRPSFYSNGFTNEETDNGKMHHEFYDSDQRHDKKIRGRDPKKERRIWERAPGRKRQRGWDDPETDGQVRDKLRRRERYSTGSWKERDYREARGYWEREKETNELVFRVGSWESCRNRDEKVNSQKSNKCTGSSEEKKDEPKEKLPEEQARQYQLDVLEQAKKRNTIAFLETGAGKTLIAVLLMKSVSTELQKQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFESKQVLVMTAQILLNILRHSIVKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVSSQVDCALKIRNLESKLDAVVCTIKDRAELEKHVPMPSEVVVEYDKAASLWSLHEQIKQMEQMVEEAARSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQAFLTALQNDERANYQLDVKFQESYLQKVVSLLQCHLSEGAILESNIVGTDTDSSAADAEGNGSDELEEGELTNSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTSQMQDTIARFRDGRVTVLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHTAFLRNARNSEETLRKEAIERTDISHLKDTCGVNSGEAIVGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILHPEFIMERHEKPGSPTEYSCKLQLPCNAPFEKLEGPPCRSMRLAQQACFASHDVHYLCVNCMRSIDFTRLCDLQAVCLAACKKLHEMGAFTDMLLPDKGIGEEAEKVEQNDEGDPLPGTARHREFYPEGVADILRGEWILSGKGCDDSKLFHLYMYSIKCENVGFSKDPLLTQVSEFAILFGNELDAEVLSMSMDLFIARSVITKASLVFKGPLEVRESQLALLKSFHVRLMSIVLDVDVEPSNTPWDTAKAYLFVPLAGGISADPMNDIDWVLVENVTETDAWSNPLQRARPDVYLGTNERSLGGDRREYGFGKLRHGMAFEQKSHPTYGIRGAVAQFDVVKASGLAPKRDAGEVPYQVDITKGKLMLADSCIEAENLVGRIITAAHSGKRFYVDSVRFDMTAENSFPRKEGYLGPLEYSSYADYYKQKYGVDLRYKQQPLIRARGVSYCKNLLSPRFEHSEGHDGESEEINEKIYYVFLPPELCFVHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKDIISYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNIVLYQYALNKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKEEELSFFDQEVEYDEGLRRKIHDDEEYEEYEMEDGELESDSSSYRVLSGKTLADVVEALIGVYYVEGGKNAANHLMKWIGIEIDFDLKEINYSIKPSTVPDNILRTIDFDALEGSLNVKFTDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHNLHLHLRHGSSALEKQIRDFVKEVQNELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGCNTAAVWKVFQPLLNPMVTPETLPMHPVRELQERCQQQAEGLEYKASRNGNLATVEVYVDGVQVGVAHNPQKKMAQKLAARNALVALKEKEKAEAKVNVDDDGKEKKNGSQTFTRQTLNDICLRRNWPMPLYKCVHEGGPAHAKRFTFAVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKWYA