Information report for SEVIR_9G409800v2
Gene Details
|
|
Functional Annotation
- Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007; Kim et al 2008). To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 (other names: ensalada-1, ens-1).
Homologous
- Brachypodium distachyon: BRADI_1g62590v3
- Setaria italica: SETIT_039482mg
- Triticum aestivum: TraesCS4D02G167200
- Zea mays: GRMZM2G083689
Gene Resources
- Pfam: PF02854 PF09088 PF09090
- UniProt: A0A4U6T4X3
- EMBL: CM016560
- AlphaFoldDB: A0A4U6T4X3
- OMA: CAAEGLM
- InterPro: IPR003890 , IPR015172 , IPR015174 , IPR016024 , IPR027159
- PANTHER: PTHR12412 , PTHR12412:SF2
- SUPFAM: SSF48371
- Gene3D: 1.25.40.180
Sequences
CDS Sequence
- >SEVIR_9G409800v2
ATGAGCGCGGGCTGGAGGACCCTGCTGCTGCGCATCGGCGACAGGTGCCCCGAGTACGGGGGATCCGCAGACCACAAGGAGCACATCGAAACTTGCTATGGCGTGCTAAGTCGAGAATATGAACACTCCAGAGACGCTATATTTGAGTTCCTCCTTCAGTGTGCAGAACAACTGCCTCACAAGATCCCTTTCTTTGGAGTTTTGATTGGTCTGTTAAACTTGGAGAATGAAGACTTTGCCAAGGATATTGTAGATACCACACAGGCCAAGCTACAGGATGCCTTGCACACTGAAAATCGTGATAGAATTAGGATATTGCTGCGTTTTCTCAGTGGCCTGATGTGCAGCAAAGTTGTAGTTCCAAATTCAATCATTGAGACATTTGAGACTCTATTATCATCTGCTGCAACAATATTAGACGAGGAGACTGGAAATCCTTCGTGGCAACCACGTGCTGACTTTTATGTTTATTGTATTTTGGCTTCCCTTCCATGGGGTGGTCCAGAATTGTTTGAGCAAGTTCCGGATGAGTTCGAGAGAGTTTTGGTTGGTATACAGTCTTACATAAGTATCAGAAGGCATTTTGATGATATTGCTTTCTCTGTCTTTGAGACAGATGAAGGCCACTCTCCCAACAAAAAGGATTTCATTGAAGATCTATGGGAGCGCATTCAAATTCTTTCCCGCAGCGGATGGAAAGTTAAAAGTGTTCCGAAGCCCCACTTGTCGTTTGAAGCTCAGCTGGTGGCTGGAAAATCACATCGTCTTTCCCCGATTAGTTGCCCTCCGCCTAATCTCTCTCCGACTTCTTCTGAAATATTAAAAGGACAGGAAAAACATGAAGCTGATCTGAAGTATCCTCAAAGGCTTCGTAGACTCCATATCTTTCCGACAAATAAAGCTGAGAACATGCAGCCTGTAGATCGTTTTGTTGTTGAAGAATGCATATTGGATGTGCTACTTTTCTTCAATGGCTGTCGGAAAGAATGTGCGTTTTATCTGGTCAGCCTACCTGTGTCTTTTCGATATGAGTACCTGATGGCTGAAACCATATTTTCACAGCTACTGCTGTTGCCCAATCCACCTTTCAGGCCAATTTATTATACATTGGTTATCATTGATCTTTGCAAGGCTTTGCCAGGTGCATTCCCTTCAGTTGTAGTAGGAGCTGTGCATGCTCTTTTTGACAGAATTAGTAAGATGGACATGGAGTGCCGCACCAGGCTTATCCTATGGTTTTCGCACCACTTGTCAAATTTTCAATTCATTTGGCCTTGGCAGGAGTGGTCTTATGTCAAGGACCTCCCAAAGTGGGCTCCACAGCGTGTTTTTGTCCAAGAAGTGTTGGAAAGGGAAATCCGCTTGTCCTACTTTGAAAAAATCAAACAGAGTATCGAGGATGCTGCTGAGTTAGAAGAACTGTTACCCCCAAAAGCAGGCCCTAATTTCAAATTCCTTAGTGATGAAAGCAATGAAAAAACCGATGGCCATAAGTTATCAAAGGAACTTGTTGGCATGGTTAGAGGAAAGAAGAACACACGTGATATTATTTTATGGGTGGAGGAACAGATAATTCCGACAAATGGTGCTGAATTTGCCCTTGATGTTGTTATCCAGACACTTCTTGACATCGGTTCAAAAAGTTTCACCCATCTAATCACTGTTTTGGAGAGATATGGTCAAATAATCTCCAAGCTATGTCCAAATGAGGAAATGCAGTTACTGTTGATGGATGAAGTCAGTGCTTATTGGAAGAACAGTACCCAGATGACTGCTATAGCTATTGATAGAATGATGGGTTATCGCATGATATCAAATTTGGCTATTGTCAAATGGGTTTTTTCTCCTGCCAATGTTGAGCAATTCCATGTTTCTGATCGCCCATGGGAGATTCTCAGAAATGCTGTTAGTAAAACGTACAATCGGATCAGTGACCTCCGGAAGGAAATTCAGTCACTCAAGAAGGGCCTTCAAGTTGCTAAAGAGGCCAGTGCAAATGCCATAAGGGAGCTGGAGGAGGCAAAATCAGTACTGGAGATTGTAGAGGGGCAACCTGCACCAGCTGAAAGACCAGGTAGGCTAAGGCGGCTCCAAGCATATGCTGACAAGGCAAAGCAAGAGGAAGTAAGTATGGAAGAATCTTTAGAAGCAAAGGGAGCTCTCCTTGCTCGGGCTCTTGAAGAAAGCAAGGAATTGCTTAAGTTACTATTTAAGAGGTTTGTTGACGTGCTCACTGAACGTTTGCCAACTGTCTCTGCTGATGGAGAGATTCCTAATCTTCGCGCTGGAGATCAAAATGTAAATTTTGCTGCCCGAGATCTTGAAACAGCAACAATGGAGATAGACAATGAAAATGGAGCAGATAAAAATAGTGAACCAAATGGGCAAAACACAAAAGATGGCTACAATGTTGGAGAGCTCGAGCAATGGTGCCTTTGTACACTGGGTTATCTCAAGTCATTTTCCCGCCAATATGCAACTGAGATTTGGTCTCACATAGCAATGTTGGACGAGGAGGTCTTCATTGGGGACATTCACCCTCTTATCCGGAAAGCTGCTTTCTCTGGGCAGCAGGTGCACCAGAGGTCCTCATCACCATGCTGTCCAGAAGCATTACCTGCAGATTATAGTAAATTACAGTTATGTGGCTGTCCATGTTGCTTTCAAAATTAA
Protein Sequence
- >SEVIR_9G409800v2
MSAGWRTLLLRIGDRCPEYGGSADHKEHIETCYGVLSREYEHSRDAIFEFLLQCAEQLPHKIPFFGVLIGLLNLENEDFAKDIVDTTQAKLQDALHTENRDRIRILLRFLSGLMCSKVVVPNSIIETFETLLSSAATILDEETGNPSWQPRADFYVYCILASLPWGGPELFEQVPDEFERVLVGIQSYISIRRHFDDIAFSVFETDEGHSPNKKDFIEDLWERIQILSRSGWKVKSVPKPHLSFEAQLVAGKSHRLSPISCPPPNLSPTSSEILKGQEKHEADLKYPQRLRRLHIFPTNKAENMQPVDRFVVEECILDVLLFFNGCRKECAFYLVSLPVSFRYEYLMAETIFSQLLLLPNPPFRPIYYTLVIIDLCKALPGAFPSVVVGAVHALFDRISKMDMECRTRLILWFSHHLSNFQFIWPWQEWSYVKDLPKWAPQRVFVQEVLEREIRLSYFEKIKQSIEDAAELEELLPPKAGPNFKFLSDESNEKTDGHKLSKELVGMVRGKKNTRDIILWVEEQIIPTNGAEFALDVVIQTLLDIGSKSFTHLITVLERYGQIISKLCPNEEMQLLLMDEVSAYWKNSTQMTAIAIDRMMGYRMISNLAIVKWVFSPANVEQFHVSDRPWEILRNAVSKTYNRISDLRKEIQSLKKGLQVAKEASANAIRELEEAKSVLEIVEGQPAPAERPGRLRRLQAYADKAKQEEVSMEESLEAKGALLARALEESKELLKLLFKRFVDVLTERLPTVSADGEIPNLRAGDQNVNFAARDLETATMEIDNENGADKNSEPNGQNTKDGYNVGELEQWCLCTLGYLKSFSRQYATEIWSHIAMLDEEVFIGDIHPLIRKAAFSGQQVHQRSSSPCCPEALPADYSKLQLCGCPCCFQN