Information report for SEVIR_7G056100v2
Gene Details
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Functional Annotation
- RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.
Homologous
- Brachypodium distachyon: BRADI_3g28930v3
- Oryza sativa: LOC_Os04g32960, LOC_Os02g32350, OsTudor-SN
Gene Resources
- Pfam: PF00565 PF00567
- UniProt: A0A4U6TSG2
- EMBL: CM016558
- AlphaFoldDB: A0A4U6TSG2
- OMA: HYTETRV
- InterPro: IPR002999 , IPR016071 , IPR035437
- PANTHER: PTHR12302 , PTHR12302:SF10
- SUPFAM: SSF50199 , SSF63748
- PROSITE: PS50304 , PS50830
- Gene3D: 2.30.30.140 , 2.40.50.90
Sequences
CDS Sequence
- >SEVIR_7G056100v2
ATGGCAGCGTCGGGCTGGCTGAGGGGGAAGGTTAAGGCCGTGCCCTCCGGCGACACCCTGGTAATCATGTCGATCGCAAAGGCTGATACGATCCCACTGGAAAAGTCGATCACCTTGTCATGCATCATCGCTCCGAGGCTGGCACGGCGTCATGGAACGGACGAGCCGTTTGCCTGGGAAAGTAGAGAATTTCTGAGAAAGCTTTGCATTGGACAGGAAATTAAATTTAAGATCGACTATGTACTTCCTGGATCAAGCCGTGAATTTGGCACGGTCTATCTTGGTGGTGACAAAAATATCGCAGGCCTGGTAGTTGCCCAGGGGTTCGCCAAGGTAAAAGAACAAGGTCATAAGGGTCATGTGAGTCCATATGTCACTGATTTGCTAAGATTGGAGGAGGTTGCTAAAGACCAAGGTTTAGGTCGTTGGAGTAAGGAACATGGCGCTGCGGAGGCTTCAGTAAGAATTCTTCCATCATCGACCATGGGAGAAGCCGGCCCTTCTGATGTGAAGGGTTTTATTTCTGAGATGAAAGGGAAAGCTTTGGAGGCCATTGTTGAGCAAGTGCGTGATGGTAGCACTATCCGTGTCTGCTTGATCCCTAGCTTTCATTTTTTTCAGGTTTACGTTGCTGGTGTTCAGGCTCCATCCATGGGAAGACGAACATCTATTCCAAGTGCAGTTGCTCAAACAGAAGTAACTAACAATGTTGATGTGAACGGTAAAGCATCTGAAGAAGCTCAAGCACCACTACTGGGTACATTACAGAAGGCTGTAGCATCTGCAGTTACTTATTCTGAAATTCCACCAGATAGGTTTGGTAAGGAGGCCAAGCACTTCACTGAGACAAAAGTTCTAAATAGAGAAGTGCGGGTTATACTGGAGGGAACAGACAGTTTTGATAACATGTTTGCTTCAGTGTATTATTCTGATGGAAATACTGCCAAGGACTTGGCGCTTGAGCTTGTAGAAAATGGGTTGGCAAAGTATATGGAATGGAGCGCAAACATGCTTGGAGCTGAAACCAAAAGAAAGCTTAAGAATGCCGAACTTCAGGCTAAGAAGGAACAGCTAAGGATATGGACGGGATTTCAGCCACCTGTTACAAATACAACACCAATACACAATCAGAAATTCACAGGAAAAGTCATAGAGGTGGTGAATGGTTACTGTATAGTTATTGCTGATGATATGGTGCTTGTTGGAAGTCCTTTGGCAGAGCGCCGTGTAAATATTTCGAGCATCAGACCTCCTAAGTTGGTTGATTCTTCTGGAGAAAGCAAAACTATTGAACATTTTGCTCGTGCAGCTAAGGAATTCTTGCGTACACGGCTAATTGGCAAACAGGTTCATGTCTCAATGGAGTATTCTAGGAGAATCAATATTTCAAATGGACATGCTGCAGATAAAACCAACATAGTTGACACCAGAGTTTTGGATTATGGATCCGTTTTTCTACCCTCCCAGAGTGGTAGCCCCGGCAACCTATTTGGAGCCAATGTCGCTGAGCTCTTGCTTTCACGAGGATTTGCTGATATCACAAGACATCGAGACTATGAGGAGAGGTCACACCACTATGATGCACTATTGGCAGCATATTCGCGTGCTGAAAAAGCAAAGAAAGGATATCATGCTAAAAAGTATTATCCTGCGACTCATATGAATGATTTGACAACAGTTCCTGCAAAGAAGGCTAGAGATTTTTTCCACTTGTTACAACGAAACAAAAGGCATTCCGCTGTTGTTGAGTACATTTTTAGTGGGCATCGCTTCAAACTAACAATACCTAATGAGACAAGCACCATTACCTTTTCATTCTCCTGTGTTCGGTGCCCTGGTAAAAATGAGCCCTACTCGGATGATGCCATTGCTCTAATGAGGAGAACGATACTCCAACATGATGTTGAGATTGAGATTGAAGCTGTGGATAGGACCGGGACATTCTTAGGTTCCTTATGGGAGTCCAAAAACAATATGGCTTATGTTCTTCTTGAAGCCGGCCTAGCCAAGCTTAGTTCATTTGGACTTGATAGAATCTCAGATGCTCAAACCCTCATAAGGGCAGAAAAATCCGCACAACAGAAGAAATTGAAGGTGTGGGAGAACTACAATGAAGCAAAAGTGATTCCCCATGGATCGTTGATGGGACAAAATGGAAAAGAATCTTTCAAGATTGTCGTAACTGAAGTCATTGGTGGTGGAAAGTTCTATGCCCATATAGTTGGTGATCGTCGCTTGGACAGCATTCAACAACAGCTTGCTTCTATGAAATTTAATGATATACCAGAAACTTTGATGGTTGCTAAAGATTTCCCAGATACTTTATCAAATACCTTGGAAGTTCAAGATCGACCAAGGCATTGTCCATCGAACACATCAGAAGTTCAAGCTGAGCCAAAGAATCATGTGGTTCCTCTTCCTTCTAGGTGGTCTAGTTTGTTTAAAGACAAAGTAGATACTTTGAAAGATGAAGTTCCATTAGATACTTCGAAAGCTGAAGATTTGTCATCTAATGGTCCATCTGATGCTGTTCCATTTAATCCAACCAAGGGAGATGTGGTACTAGCCCAATTCACTCTCGACAATTCATGGAATAGAGCTATGATTGTGAGTGAACATCAAGGACCCATGGAGAGGGAGTTTCTAGTATTTTATATAGACTATGGAAACCAAGAAATAGTTACTTACAGTCGCTTGAGACCTGCACATGCAAATCAATCTACTTCCTTGATTCCACCACTTGCGAAGTTATTCCGTCTTGCATTCATCGCAGTTCCTAACCTAAAAGATAACCTTGGTGAACAAGCTGCAAGGTATCTAAGCATGGTTTTGCTTGATAATGGGAAAGAGTTCAAAGCAACAATTGAAGAGCGTGCCACTGTGGAATCTAAGCAAGAAGGACAAGGTACTGGAGAAGTACTTGTTGTGACTTTGTTTGATGAGGATGCTGAGAGCAGCATCAATGCTGCAATGCTGGAGAATGGCTTGGCTCAAATCGAGACACATAGATTGATCTCACGGGAGCGTAGGGCTGCTGTGAAAAATCTAGAAGAGTTCCAGGAGCATGCAAAGAAGGAGCGTCGTGGCATTTGGCGTCTTGAGGGTGTGGGTGTGCCAGATAAATCTGCAAAAGACAGCAATGCATGTGACATCAATGATGATGAGGATCTGCTAGCGCCAGCTCGAGCTCAGCCTCCTAGCAGGGGCTTTGACCTCATCGATCTCATTGCTTCCAAGTCCACCGGAACTCCGAAACCTAGTAGGGAACACGTCATGGGCGATTCATTGCCTTAA
Protein Sequence
- >SEVIR_7G056100v2
MAASGWLRGKVKAVPSGDTLVIMSIAKADTIPLEKSITLSCIIAPRLARRHGTDEPFAWESREFLRKLCIGQEIKFKIDYVLPGSSREFGTVYLGGDKNIAGLVVAQGFAKVKEQGHKGHVSPYVTDLLRLEEVAKDQGLGRWSKEHGAAEASVRILPSSTMGEAGPSDVKGFISEMKGKALEAIVEQVRDGSTIRVCLIPSFHFFQVYVAGVQAPSMGRRTSIPSAVAQTEVTNNVDVNGKASEEAQAPLLGTLQKAVASAVTYSEIPPDRFGKEAKHFTETKVLNREVRVILEGTDSFDNMFASVYYSDGNTAKDLALELVENGLAKYMEWSANMLGAETKRKLKNAELQAKKEQLRIWTGFQPPVTNTTPIHNQKFTGKVIEVVNGYCIVIADDMVLVGSPLAERRVNISSIRPPKLVDSSGESKTIEHFARAAKEFLRTRLIGKQVHVSMEYSRRINISNGHAADKTNIVDTRVLDYGSVFLPSQSGSPGNLFGANVAELLLSRGFADITRHRDYEERSHHYDALLAAYSRAEKAKKGYHAKKYYPATHMNDLTTVPAKKARDFFHLLQRNKRHSAVVEYIFSGHRFKLTIPNETSTITFSFSCVRCPGKNEPYSDDAIALMRRTILQHDVEIEIEAVDRTGTFLGSLWESKNNMAYVLLEAGLAKLSSFGLDRISDAQTLIRAEKSAQQKKLKVWENYNEAKVIPHGSLMGQNGKESFKIVVTEVIGGGKFYAHIVGDRRLDSIQQQLASMKFNDIPETLMVAKDFPDTLSNTLEVQDRPRHCPSNTSEVQAEPKNHVVPLPSRWSSLFKDKVDTLKDEVPLDTSKAEDLSSNGPSDAVPFNPTKGDVVLAQFTLDNSWNRAMIVSEHQGPMEREFLVFYIDYGNQEIVTYSRLRPAHANQSTSLIPPLAKLFRLAFIAVPNLKDNLGEQAARYLSMVLLDNGKEFKATIEERATVESKQEGQGTGEVLVVTLFDEDAESSINAAMLENGLAQIETHRLISRERRAAVKNLEEFQEHAKKERRGIWRLEGVGVPDKSAKDSNACDINDDEDLLAPARAQPPSRGFDLIDLIASKSTGTPKPSREHVMGDSLP