Information report for SEVIR_5G001700v2
Gene Details
|
|
Functional Annotation
- Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.
Homologous
- Brachypodium distachyon: BRADI_1g73110v3
- Saccharum spontaneum: Sspon.01G0035370-1B, Sspon.01G0035370-2C
- Setaria italica: SETIT_000165mg, SETIT_034064mg
- Triticum aestivum: TraesCS4D02G287000
Gene Resources
- Pfam: PF04096 PF12110
- UniProt: A0A4U6UAY1
- EMBL: CM016556
- AlphaFoldDB: A0A4U6UAY1
- OMA: ELESWGM
- InterPro: IPR007230 , IPR021967 , IPR036903 , IPR037665
- PANTHER: PTHR23198 , PTHR23198:SF26
- SUPFAM: SSF82215
- PROSITE: PS51434
- Gene3D: 1.25.40.690 , 3.30.1610.10
Sequences
CDS Sequence
- >SEVIR_5G001700v2
ATGGCTGCCAGTACTGTGTTCCCTGTGCTGCGCTCCTCCGAGTACTTCACAAGGCCATCGATTGATGAGCTGGTTGAGAGGGACGTGGCTGATCCTGGTTACTGCAGCAGGGTTCCAAACTTCATCATCGGGAGGGCTGGATATGGGCAAGTTAGGTTTCTGGGCAACACTGATGTGAGGGGGATTGACCTGAATGATATCGTCAGGTTTGAGAAGCATTATGTGGTTGTTTATGAGGATGAGACTTGTAAGCCGCCTGTAGGGCATGGTCTTAATAAAGCAGCAGAAGTGTCATTGCTGCTGAATCTAAAGGATCTTCCGGAGCCCAGTATCCTTATTGAGGTGCTGAGGTGTCATGCAAGAAAGCAAGGTGCTAGGTTTCTTTCGTTCAATCCAGTGAATGGTAAATGGAAATTTGAGGTTGATCATTTTAGTAGATTTGGGCTTGTGGATGAGGAGGAAGAAGATGTTGTGATGGATGAGGCAGCTGTTAGGCAGCCAATTGCTGAACTAAGAGAAAGAGAACCACCTTCAAATGGTTATGAAATTGAGCTTTCACATTCATTGCCTACTCATCTTGGGCTTGACCCTGCAAAGATGCAAGAAATGAGGATGGCGATGTTTTACAATGCGGAAGATGATGAATATATGGAGGATGGGATTGGGTTCCCATCTGATGAGAGGTACCTTAGCAGAGAAAGGATGAATGTGGATTCACCCACTTCAAGTGGAGGTTCAAGGTTAAGATCTGTCTCACCCTTGCACATGTCTTCTCAGAAGGTTGGCAGGAGGCCTGGTATGCCTGCTCGGAAAGAACCACAAGCACTATTGGAATACAGTAAGAATTCTTCAGAGCTTGGTACAACGACTCAGGGTATGCTTATGTCTGGGCAAAACAAAGGATTTCCAGTGAAAATGACCAAGGTTGAAGGCTTTAAGCTGCCAGCTGAGCAAGAAACTCCTGTTGCTGGAAAAATGTATACTAATTGTGTAGTGGATGCTGCATTATTCATGGGTAGATCATTTCGTGTTGGTTGGGGACCAAATGGTATGCTTATTTATTCAGGTAGTCTGGTCAATAGTCCTGGAACTGGCCTATCTTCAGTTATCCACATAGGGAAAGTTGCAAGCGACAAAGTTGTGCGTGATGATAAGAACAAGATTAAGGAGGACCTAGCAGAACTAGTGTTTTCTGATCCGATGGACCTCCATAAGAGTCTTGATCATGAATTTCTGGAGACTGAGTCTGACTCGTTCAGATTAAAGCTTCAGAAAGTTGTGGCAAATCGTTTGGTTTTGCCAGACATCTGCAGGTCATATATTGACATCATTGAAAGGCAACTTGAAGTCAGTGATTTATCTATGTCTTCGCGTGTGCTGTTAATGCATCAAGTTACAGTGTGGGAGTTAATTAGGGTCTTGTTCTCAGAAAGATCAAATGGAAACCAGTTGGAGCCCATTGGAAATGATGATCAGGAAGGCATGGTTTTAGACAAGAAAGAAAACATAGATCTTGATGCACTCCCTTTGGTTAGGAGAGCAGACTTTAGCAATTGGTTGCAGGACAGTGTTTGCCATCGGGTGCAAGGCGAGGTGGGTTCCTTAAGTGATGCCAGGTATTTGGAACATATTCTTCTTCTTCTAACTGGTCAACAATTGGACTCAGCCACGGAAGTTGCTTCCTCAAGGGGTGATGTCCGGTTGGCAATCTTGCTAAGTCAGGCAGGTGGGTCAATGTCAAATCGATCTGACCTTTCTCAGCAACTGGATCTATGGAAAAGGAATGGCCTAGATTTTGATTATATTGAGGAAGACAGGTTAAAGGTATATGAGTTGCTCGCTGGTAACATAGAGGCTGCTTTACTAGATTCAGCAATTGACTGGAAAAGGTACCTTGGTTTGATCATGTGGTATCAGTTACCACCTGATACATCACTTGATAGTATAATCCATTCCTATCATCATCTCCTTAGTGAGGGCAAAGTTCCCTATCCTGTTCCTGTATATATAGATGAAGGACCACTTGATGAAGCACTTCAGTGGTCCCCAGGTGACCGTTTTGATATCTCTTTTTACCTAATGCTTCTTCATGCCAATCAAGATGAGAAGTTTGGGCTGCTAAAAACTATGTTCAGTGCATTCTCATCTTCATATGATACCTTGGACTATCATATGATATGGCATCAGCGTTCAATTTTGGAAGCTATTGGTGCTTTCAGTTCAAATGATCTTCACTTACTAGATTTGAGTTTTGTTTATCAATTACTTTGTCTTGGGAAGTGCCATTGGGCTATCTATGTCATTCTACACATGCCATATCTCGATGATGCCCCATACATCCATGAGAAGTTAATCAGGGAAGTTTTATCACAGTATTGTGAGTCCTGGAGTAAAGATGATGCTCAAAGGCAATACATTGTGGAACTTGGTATACCAGAAGAATGGATGCATGAAGCTCTGGCTCTTTACCATGAATACTATGGAGATCAGCAGGGTGCACTGGAGAATTTTATTCAGAGTGGCAATTGGAAGAAAGCTCATACTATTTTCATGACCTGTATTGCTCATACTATGTTTCTGTCATCACACCATCAGGAGATCTGGGAGATCACAAGTGCCTTGGAGAATCACAAGTCAGAGATTGCTGACTGGGACCTTGGAGCCGGAATATACATTGATTTCTACATGATAAAGAACTCATTTCAAGAAGAAAGTGCGATGGAAGATTCGGATCCACTTGAGAGGAAAAATGAATCATGCAAAAGTTTCTTCGGCCGATTAAATGATTCCTTGCTAGTCTGGGGAAGCAAATTACCTGTTGAATCGAGGGCATGCTACTCGAAGATGGCAGAGGAGCTATGTGAGCTTTTCATGAACAGCCCAGGCGTGGCAATGAATCTACACATGGGATGTTTCCAGACGATGCTGAATGCCCCGGCCCCTGATGGCTGCAAGTCGTCGTACCTGCAGGAGGCAGTGTCTGTCTTCACCGAAATTCTGTGCAGTGATTCAGCTGTCTGGGGCCTTTCTTAA
Protein Sequence
- >SEVIR_5G001700v2
MAASTVFPVLRSSEYFTRPSIDELVERDVADPGYCSRVPNFIIGRAGYGQVRFLGNTDVRGIDLNDIVRFEKHYVVVYEDETCKPPVGHGLNKAAEVSLLLNLKDLPEPSILIEVLRCHARKQGARFLSFNPVNGKWKFEVDHFSRFGLVDEEEEDVVMDEAAVRQPIAELREREPPSNGYEIELSHSLPTHLGLDPAKMQEMRMAMFYNAEDDEYMEDGIGFPSDERYLSRERMNVDSPTSSGGSRLRSVSPLHMSSQKVGRRPGMPARKEPQALLEYSKNSSELGTTTQGMLMSGQNKGFPVKMTKVEGFKLPAEQETPVAGKMYTNCVVDAALFMGRSFRVGWGPNGMLIYSGSLVNSPGTGLSSVIHIGKVASDKVVRDDKNKIKEDLAELVFSDPMDLHKSLDHEFLETESDSFRLKLQKVVANRLVLPDICRSYIDIIERQLEVSDLSMSSRVLLMHQVTVWELIRVLFSERSNGNQLEPIGNDDQEGMVLDKKENIDLDALPLVRRADFSNWLQDSVCHRVQGEVGSLSDARYLEHILLLLTGQQLDSATEVASSRGDVRLAILLSQAGGSMSNRSDLSQQLDLWKRNGLDFDYIEEDRLKVYELLAGNIEAALLDSAIDWKRYLGLIMWYQLPPDTSLDSIIHSYHHLLSEGKVPYPVPVYIDEGPLDEALQWSPGDRFDISFYLMLLHANQDEKFGLLKTMFSAFSSSYDTLDYHMIWHQRSILEAIGAFSSNDLHLLDLSFVYQLLCLGKCHWAIYVILHMPYLDDAPYIHEKLIREVLSQYCESWSKDDAQRQYIVELGIPEEWMHEALALYHEYYGDQQGALENFIQSGNWKKAHTIFMTCIAHTMFLSSHHQEIWEITSALENHKSEIADWDLGAGIYIDFYMIKNSFQEESAMEDSDPLERKNESCKSFFGRLNDSLLVWGSKLPVESRACYSKMAEELCELFMNSPGVAMNLHMGCFQTMLNAPAPDGCKSSYLQEAVSVFTEILCSDSAVWGLS