Information report for SETIT_016290mg
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Arabidopsis thaliana — AT1G62830
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: K3YPU8
- RefSeq: XP_004953964.1
- EMBL: AGNK02000558 , CM003528
- KEGG: sita:101753032
- OMA: SSRGEMF
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: K3YPU8
- SMR: K3YPU8
- eggNOG: KOG0029
- STRING: 4555.K3YPU8
- HOGENOM: CLU_004498_5_0_1
Sequences
CDS Sequence
- >SETIT_016290mg
ATGGAGGAAGGCAGCGAGGCGCAGCCACCGCACCCACCCAACGCCGAAGCCGTGGAGCAGCCACCCCCCGTCCCAATGGACCAAGACGAGGGCCGGGAAGCAGCCGCGGAACCCATGGAGGACGGAGAAGCCGCCACCGCAGATGCCTCCGAGGCTGCGGATCCCATGGAGGACGGGGAAGCGGCAGGAGACTCCGCGGCGGCCGCGGAGCCCATGGAGGACGACGCGCCCACGTCCTCCCCGACCCCGTCGGCGCCATCCGCCACCGCGGCCGTCGACGACTCCACCATCGCGCGGAAGCGCCGCCGGCGGAAGAAGCAGTTCCCTGGTATGATTCCCACGGCCGGCGTCCGCGTCCTCCGTGGATCCTCCTCCTCCTACACCCACAACGCGTCGCATCTGACCGGCGTCCCGCGCCGCCGGGGGCGGCCCCCGACCTCCTCCTCCCTCCGCCTCGCCCGGGAGCTCGACTCCGAGGCCCTCATCGCTCTCGCCGCGGGGTTCCCTGCGGACTCCCTCTCCGAGGACGAGATCGCGGCCTCCGTGCTCCCACGCATTGGCGGCGCCGAGCAGTCCAACTACCTCGTCGTTCGCAACCACATCGTCGCGCTCTGGCGCTCTAATCCCCTTTCCCCCGTCGCAGCCAACGCCGCGCTTGCTTCCATTCGCTCTGAGCACGCGCCCCTTGTTGCCGCGGCGCATTCCTTCCTGTCCGAGCACGCTTACATCAATTTTGGCCTTGCCCCCGCTGTCCTCTCGCTTCCCCCACGGCCTCCTCCCTCCTTTCCTCCCCCATCCGTCCTCATTGTTGGTGCTGGCCTTGCCGGTCTCGGCGCCGCACGCCACCTCATAGCATTAGGCTTCAAGGTGGCCGTCATTGAAGGTCGGCTCCGTCCGGGCGGCCGTGTGTTTACCAAGACAATGCGTTCTTCTGCTGCAGAGTATCCTGACACTGTTGCTGCTGCTGATCTTGGAGGCAGCGTGCTCACCGGAATCAATGGGAATCCCCTTGGTGTCATTGCACGGCAGCTTGGATTCCCGCTCCACAAGGTGCGGGACAAATGCCCACTGTATCTCCCAGATGGCCGCCCAGTTGACCCTGACATGGATGCTCGTGTTGAGGCTGCTTTTAACCAGCTTCTGGACAAGGTTTGCCAGTTGAGGCAGGTGATTGCAGATGGTGTACCACATGGTGTTGATTTGTCCCTAGGCATGGCACTTGAGGCATTCCGAGCAGCGCATGGTGTTGCTGCTGAGCATGAAGAAAGGATGCTTCTGGACTGGCATCTGGCAAACCTGGAGTATGCTAACGCTGCCCCTCTTGCTGATCTCTCCATGGCCTTCTGGGACCAGGATGATCCATATGAAATGGGTGGAGATCACTGCTTTATTCCTGGTGGAAATTCTCAGTTTGTCCGTGCACTTGCTGATGGCATCCCAATATTCTATGGACAGAATGTGCGAAGGATACAGTATGGGTGCGATGGTGTGATGGTGCACACTGATAAGCAGTCGTTCCGTGGTGATATGGTGCTCTGTACAGTTCCGCTTGGCGTGCTCAAGAAGGGTAACATCAAGTTTGTGCCTGAGCTGCCAGCTCAGAAGAAAGAGGCCATCCAAAGATTGGGTTTTGGTCTGCTCAACAAGGTTGTGATGTTGTTCCCTTATGATTTCTGGGATGGTAGGATTGATACATTTGGTCACTTGACAGAAGACTCTGGTCAGCGTGGCGAGTTCTTCCTGTTCTACAGCTATTCTTCTGTCTCAGGAGGGCCATTGCTCATTGCCCTTGTTGCTGGGGAATCTGCAGTCAAGTTTGAGCAGGCTTCACCAATGGAAAATGTTGAGAAGGTGCTGGAAACACTTAGGAAAATCTTTTCACCCAAGGGGATCGAAGTTCCAAACCCATTGCAAGCAATATGCACTCGATGGGGCACTGACAGCTTTACTTATGGATCATACTCATATGTGGCTATTGGCGCTTCTGGTGATGACTATGACATTTTGGCTGAGAGTGTGCATGATAGAGTTTTCTTTGCTGGGGAGGCAACAAACAGACGGTATCCCGCTACAATGCACGGAGCCCTGCTTAGTGGGTATAGGGAGGCTGCTAACATTTTAAGAGCAGCTAGAAGGAGAGCTAAAAAGGTGGACTCTCCTGAGAAAATGGATATTAATGTTGAAGTAAAAGTGGATGCCAACGGTGAAGTCAAAGGCAATGTTAAAGATATAGATAGCAACATTGATTTGGATGATCTCTTCCGTTCTCCTGATGCTGCATTTGGGGGGTTCTCAGTTCTCCATGACCCATCTACCTCTGAACCCGATTCAATTTCCTTGCTGCGTGTTGGAATTGGTGCTAGAAAGTTAGGTTCTGGTTCACTTTTCCTCTATGGATTAATAATGCGAAAGAATGTAGCTGTGTTGGCTGCAGTTGAGGGTGATGAACGACGGTTGAGTACAATGTACCGAGATTTTGGGACAAGACTTGTGGGATTGGATAGCTTGGGTGATGCTGGAGAAAGCCTTATCTCTCGGATAAAGGCTGCTGCTAGGAAACAATACAAAAAGTATGCTTGGATGGTCAACTCTCACCTGTAA
Protein Sequence
- >SETIT_016290mg
MEEGSEAQPPHPPNAEAVEQPPPVPMDQDEGREAAAEPMEDGEAATADASEAADPMEDGEAAGDSAAAAEPMEDDAPTSSPTPSAPSATAAVDDSTIARKRRRRKKQFPGMIPTAGVRVLRGSSSSYTHNASHLTGVPRRRGRPPTSSSLRLARELDSEALIALAAGFPADSLSEDEIAASVLPRIGGAEQSNYLVVRNHIVALWRSNPLSPVAANAALASIRSEHAPLVAAAHSFLSEHAYINFGLAPAVLSLPPRPPPSFPPPSVLIVGAGLAGLGAARHLIALGFKVAVIEGRLRPGGRVFTKTMRSSAAEYPDTVAAADLGGSVLTGINGNPLGVIARQLGFPLHKVRDKCPLYLPDGRPVDPDMDARVEAAFNQLLDKVCQLRQVIADGVPHGVDLSLGMALEAFRAAHGVAAEHEERMLLDWHLANLEYANAAPLADLSMAFWDQDDPYEMGGDHCFIPGGNSQFVRALADGIPIFYGQNVRRIQYGCDGVMVHTDKQSFRGDMVLCTVPLGVLKKGNIKFVPELPAQKKEAIQRLGFGLLNKVVMLFPYDFWDGRIDTFGHLTEDSGQRGEFFLFYSYSSVSGGPLLIALVAGESAVKFEQASPMENVEKVLETLRKIFSPKGIEVPNPLQAICTRWGTDSFTYGSYSYVAIGASGDDYDILAESVHDRVFFAGEATNRRYPATMHGALLSGYREAANILRAARRRAKKVDSPEKMDINVEVKVDANGEVKGNVKDIDSNIDLDDLFRSPDAAFGGFSVLHDPSTSEPDSISLLRVGIGARKLGSGSLFLYGLIMRKNVAVLAAVEGDERRLSTMYRDFGTRLVGLDSLGDAGESLISRIKAAARKQYKKYAWMVNSHL