Information report for SETIT_016222mg
Gene Details
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Functional Annotation
- Encodes a ubiquitin-specific protease, and its activity has been confirmed in an in vitro assay. ubp15 mutants have defects in cell proliferation, and the associated processes of leaf, root, stem, flower, and silique development. UBP15 can be found in the nucleus and cytoplasm in transient assays. Though UBP15 is expressed in many tissues, UBP15 transcript levels are higher in rosette leaves and inflorescences than in other parts of the plant.
Homologous
- Arabidopsis thaliana — AT1G17110
Gene Resources
- Pfam: PF00443 PF01753
- UniProt: K3YPN0
- RefSeq: XP_012704150.1
- EMBL: AGNK02000026 , CM003528
- OMA: HECARCS
- InterPro: IPR001394 , IPR002893 , IPR018200 , IPR028889 , IPR038765 , IPR050164
- PANTHER: PTHR24006 , PTHR24006:SF685
- SUPFAM: SSF144232 , SSF54001
- PROSITE: PS00972 , PS50235 , PS50865
- Gene3D: 3.90.70.10 , 6.10.140.2220
- OrthoDB: K3YPN0
- CDD: cd02661
- eggNOG: KOG1865
- STRING: 4555.K3YPN0
- HOGENOM: CLU_007397_1_0_1
Sequences
CDS Sequence
- >SETIT_016222mg
ATGCTCCAACCAAGGGAAGCTGATGTGCCTGTGCTCTTTCTTGTCTTCATTGTGCTTCCTGTGGTAGCTTATTTTCTTCTTGGAAGATGGCATGAAGCTGCAAGTAAGAAGGCAAGGGTAAGTGTGCTTGCGCAGCGAGCCGCAGAAGAAGCCTTTAGAGTGGAAACAATGGCATGCCCGGACGTTATGCCTCCAGGGCCTTCTTTGAGAACTATGCCCTATTTCAGACCTGCACCTTCATTAAGACAAGAATTCCATGAATGCGCAACTTGCCATGCCCCTGCAAAGACTCGGTGCTCCAGATGCAAGTCTGTTAGATACTGCTCTGGTAAGTGTCAAATAATACACTGGAGGCAAGGACATAAGGAATCATGCCAAAAATGGATTGGTAGTGGGTCTAGCAGCTTTGGTGGATCTGGCACTGAGGCTTCTGAACAGATGCCCTTCTTGACTAACTTAAATTCACCTCTTCCGGGCGGTGGCATTCACTTGCGCGACATGAATTTTGATACTTTATCGGAGCCATCCTTTCCCACAACTGATGGCTTCAATCTTGATACTGATCCATTTCCGGCAGACAAAAGCAACATGAATAAATCAAATCAAGGTCTTCATATGAGTGAGAATGGTGCTGTTGGTATGTCTTATGAAAAGAACAATCACAATGCTGATGATGAAACCCGCTCTTCCGAGATTTTATCAGGAAACAAGGTGTCAAACAACTATTTTGGTTGTGCAGATGTGATGAGTGGTAATGGTGATGGAACTTATCCTGTCAAAAGTAACGCACAGCAACCTAGCAGTAGTGCTCCTGAAATAAGGAAACGGACAAAAGCAAGCATCACAATTTATGAGCCTGACATGGGTGTCTATTTAACTTCTGATATGGTCAGTTCTTGTGAGGGGCCATATGCTTCTGCTAGTGAGCCACTGCAAAGGAGTTTATCATCTGGAAGAACTATTGGGAAAGCAAATGTGGTGAATAAGAGGCTTCCATGCCCATCGGGTAAGGTGGCTTCATTACAGAAGTCACAGGAGAGGGTGTCAACATCATATCAAAATGATGGCCACGAGAAGAACCCTTGCAACAAAAATGACCAAAGATCTGCGCAAGCAACTGAACCAGCAAGCAGCAACCTACAAGGATGCAATGGAATCTCAAAGTTTGGAGCATCCAAGGTTGAAGTTTTAAAGAAACCCTCAAAATTTCTCAAAACCAGCCTTGTAGGATTGATCAATGATAATAAGCGGAATAAGGTATTGTTTCCATATGAAGATCTTGTCAAGTTTTTTCAGTATGAAGCACGGGGTATTTCTCCTAGGGGTCTTTTCAATTGTGGAAACAGCTGCTATGCTAATGCTGTTCTTCAGTGTCTGATGTGCACAAAGCCACTGATGATCTACCTGCTCCTGAGATTGCATTCAAAAGACTGTTGCTCAAAAAATTGGTGTCTTATGTGTGAACTTGAGCAATATGCTTCAACTTTACGTGAAACTGGTGGACCCTTATCTCCAAGTAGAATTCTTTCCAATCTTAGGAATATTGGATGTCGCTTGGGTGGTGGAACTCAGGAAGATGCTCATGAGTTTTTAAGGCATCTTGTGATGTCTATGCAAGCAGCGTGCTTGGATGGGCTGGGTGGTGAGAAGCATGTTGAACCAAGTTTGCAGGAAACAACACTGATACAACAGATGTTTGGTGGCCGTCTTAAATCCAAGGTTAAGTGCCTCAGATGCTATCATGAGTCTGAAAGATATGAGAATATAATGGACCTTACTTTGGAGATTCATGGCTGGGTGGAGTCATTGCAAGATGCTTTGACGCAATTCACAGCTCCTGAAGATTTAGATGGAGAGAATATGTATAAATGTGGAAGGTGTTCTGCTTATGTCAAAGCTAGGAAGCAATTGAGTGTGCATGAGGTGCCAAACATATTAACAGTTGTTCTTAAAAGATTTAAGACAGGAAAATATGGAAAGATCAACAAATGTGTCACGTTTCCTGATATGTTGGACATGGTTCCTTTCGTGACTGGTTCTGGTGATAACCCCCCTCTTTATTTCTTGTATGCCGTGGTTGTACATGTGGATACAGAAAACGCATCATTCTCTGGGCACTACATATCATATGTCAAAGATATGCAGGGTACATGGTTGAGAATTGATGACTCAGAGGTTCAGGTTGTATCAGTGAATCAAGTTATGTCAGAAGGTGCATATATGCTTTTCTACTTGAGGTCTTTTCCCCGACCACCAAGAATATACATTGAGAAGGGGCTCTTGCCTGTTCCAACATCTGGAAAGCGTCACACATCAAAATCCTCCAAGGGCTCTAAACATGAGCGCAAGCAGACAGAGTTACTCTTTTCTGCAAATGATCAAACATATGGTATTTATGATTTTAGACCTGATGGAGAAGGCTACATGCAAGATCAGCATGCAGAGTTGAGATCCAGAGATTTCCATCATGCGGATGATACCTTTGCAGACTCAGTCAGCACAGACTTCTCGGAAGCTACATCAAGTGAATGGTCTCTGTTTACCAGCTCTGATGAGTCCTCGTTTACCACTGAAAGCACTAGAGATTCATTCAGTGTTGTGGACTATGGAGACAATGCTGGCCTTGATCCGATTTCCTCTATATTTGGGCCATGTTATGCTCCAGAACATCCTCCTGGGAATTTCGTCTCATGTATCAGGTTCTCGCCTTCCAATCCTCAAACAAGGTACTTTTCAGAGAGCACAGACTTTGTCTCGGACTCTTCCATGCCGACCCACCCTCACGGCAATGTACATAGAGGAAGGTACCCGGATAGGGCATGCGCCTCTTCAGCCGAACCTCTTGTTTCAGCACATCAGCGGAGCGGGTATGGTCGGTATCCCCTTAGTAGAGATGGTTTTGTTCAAACCTCTGGATTTTGCCAAATGTAA
Protein Sequence
- >SETIT_016222mg
MLQPREADVPVLFLVFIVLPVVAYFLLGRWHEAASKKARVSVLAQRAAEEAFRVETMACPDVMPPGPSLRTMPYFRPAPSLRQEFHECATCHAPAKTRCSRCKSVRYCSGKCQIIHWRQGHKESCQKWIGSGSSSFGGSGTEASEQMPFLTNLNSPLPGGGIHLRDMNFDTLSEPSFPTTDGFNLDTDPFPADKSNMNKSNQGLHMSENGAVGMSYEKNNHNADDETRSSEILSGNKVSNNYFGCADVMSGNGDGTYPVKSNAQQPSSSAPEIRKRTKASITIYEPDMGVYLTSDMVSSCEGPYASASEPLQRSLSSGRTIGKANVVNKRLPCPSGKVASLQKSQERVSTSYQNDGHEKNPCNKNDQRSAQATEPASSNLQGCNGISKFGASKVEVLKKPSKFLKTSLVGLINDNKRNKVLFPYEDLVKFFQYEARGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMCELEQYASTLRETGGPLSPSRILSNLRNIGCRLGGGTQEDAHEFLRHLVMSMQAACLDGLGGEKHVEPSLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFKTGKYGKINKCVTFPDMLDMVPFVTGSGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQVVSVNQVMSEGAYMLFYLRSFPRPPRIYIEKGLLPVPTSGKRHTSKSSKGSKHERKQTELLFSANDQTYGIYDFRPDGEGYMQDQHAELRSRDFHHADDTFADSVSTDFSEATSSEWSLFTSSDESSFTTESTRDSFSVVDYGDNAGLDPISSIFGPCYAPEHPPGNFVSCIRFSPSNPQTRYFSESTDFVSDSSMPTHPHGNVHRGRYPDRACASSAEPLVSAHQRSGYGRYPLSRDGFVQTSGFCQM