Information report for SELMODRAFT_439216
Gene Details
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Functional Annotation
- Encodes a low molecular weight nuclear WDR protein which displays functional homology to the Swd2 protein, an essential subunit of the yeast histone methylation COMPASS complex. APRF1 acts upstream of FLC and promotes flowering under long day conditions.
Homologous
- Beta vulgaris: BVRB_4g095150
- Citrullus lanatus: Cla97C10G196710
- Glycine max: Glyma.19G063300
- Juglans regia: Jr01_04920
- Manihot esculenta: MANES_17G112900
- Medicago truncatula: Medtr6g007797
- Populus trichocarpa: POPTR_017G071900v3
- Prunus persica: PRUPE_3G290600
- Vitis vinifera: VIT_14s0066g00720
Gene Resources
- Pfam: PF00400
- UniProt: D8R1C0
- RefSeq: XP_002965408.1
- EMBL: GL377570
- AlphaFoldDB: D8R1C0
- KEGG: smo:SELMODRAFT_439216
- InterPro: IPR001480 , IPR001680 , IPR015943 , IPR036322 , IPR036426 , IPR037867
- PANTHER: PTHR19861 , PTHR19861:SF9
- SUPFAM: SSF50978 , SSF51110
- PROSITE: PS50082 , PS50294 , PS50927
- Gene3D: 2.130.10.10 , 2.90.10.30 , 3.30.200.20
- CDD: cd00028
- eggNOG: KOG1446
- STRING: 88036.D8R1C0
- HOGENOM: CLU_366164_0_0_1
Sequences
CDS Sequence
- >SELMODRAFT_439216
ATGGCTATGAAGATTTTTTTGGTCGCTTTCTTTCAGCTGATGACAATTCTCTTTCGTGTGCACGGCAGGAACTACAGTCTATCACACGGCTGGGAAGTAACGAACAACAATCAGCTTCTGGAACTGCAAGGATCACAGTCCAATGCCAGTTATCGGCTGCTCCAAGCAGGTGACAGTCCCCTCCTGAGCCAGAGCGGAAGATTTGGCTTGGCTTTCTTTCGATTCCACAACTCGGCCGAGTTCTACTTTGCTTTGGTTCTTGGCTCCAGCAACAACACGAACTCTGGCGTCTGCGTCTGGGCTGCAAACCGGGACAGTCCTGTGACAGAAAATGCTACCGTTCGTGTGACCGATCAGGGAGCTCTGGAAGTTGCCGATTGGGATGGGAAGGTTGTATGGAGTTCTCCTGGTGGAGTTTCTGAGATGGAGCTTCGAGACACTGGGAACTTTGTCCTCTACAACTCCACGGGTGGGATCTCCTGGCAGAGCTTCGACAATCCTACAGATATCCTTTTAGAAGGACAAGTCATGGTCACTAAGCAGAGACTTATCAGCAGCGCCAATTCATCAAGTCTTGCTAGCGGGAACATCAAGATGGAAGTTGAGCCGAGCGGCCTCATCTTTTTTCTCAGCCGGGACACAAGACAGCCTTACTTGGTTTGGAACTTATACAATGGAAACTTGCCAGCGGACGAGACTTCCATCAACGCACCATGCCCGACTTATCACACAGAGCTCGAGTATTCCGCTGGCCAGCTGAGACTATCGTACCAGCCATCGACGAGCAACCCTTCCCAGCTCTGCAGCGTTCCTCTCACAGCAGTACTCGGGAACAGCAGCGATGACTGGCAGTATCTCAAACTCGAAAACGATGGGAAGCTGGTTCCTTACACCTACAACTCCGGACGAGCTTCGTGGGAACAGGGTCCGCCGTTCATGAGGAACAGACTTGGAGGTTGCCTCCCGATGGCATGCGAATCGAACAGCGTTTGCTCTGGGAACGCTCAGTGCAGCTGTATAGTCCAAGACCAGAGTGGCCATCAGGAGCAAACTTGCCCAAGTCCGAGCAGCATACCTCTCGTTTGCAACCACGAACTGCAAAACGCAGAGCTTTTCGTGCGGAAGAAGCCCAAGGATCGCACCGTTTTGCTTGGAGTCAGCATTGCTGCGAGCGTGGTCCTACTATCAGCTCTCGGCTTGGTCGTGCTGATGATCTGGAAGCACAGGCTTGACAAAGTTGAGCGTGCTTTGGCTCTGGCACTGCAAGGCTCGGCTCAGAAGTATACATACAAGGAGCTGGAGGTGGCGACTGGGAACTTCGCTTCGAGCCTTGGTAAAGGCGGCTCTGGAACCGTCTATGAAGGGACTCTGGCGGACGGGAGAAAGGGGGAACAAGCTTTGTGGTGGTACTTCCCGGCCTGGGTCGTAGCTCGAGTCTCCAAGAGAGAGTTTCTCAAAGTCGTGGATACAAGGATCCGAGATAGTGTGGACGAGGACGAGGTGAAAAGTATGCTCCAGGGGGGGAAGATCAGCTCCTTGGATTTTCATCGCACGGAGGATCTCATGGTGACTGCCGCGGAGGACGCGTCCATTCGGCTCTACGATACTGCCAGTGCGACGCCCATGAAGACTCTCTACAGTGCAAGATATGGCGTGGATCACATATGTTTCACGCATCATACCAATGCTGTGATTTTTTCCTCCAGCAATGGAAGTGATGAGTCCTTGCGGTATCTATTGTTGTATGATAATAGATTTCTACGATATTTCAGAGGACACACGCAAAGAGTCCGGGGAAGACTGTCTGTGGCGTATGATCAACAAGGCCTGGTATTTGCTGTTTGCATGGAAGGCGGAGCAATCAAGCTGTTTGACGGAAGGTCTTTCGACAAGGGACCTTTTGACACTTTTCTCGTGGGTGGTGATACCGTGGAAGTCGCTGGCATGAAGTTTAGCAACGATGGCAAAATGATGCTTCTCTCCACAACAAACAGCCGGGTGTATTTGCTCGATGCCTACTCTGGAAAGAAGATGCATGGATTCACGCTCAAGCCCAGTCGAGACGGAGAAACGTTGGAAGCATCGTTCAGTCCAGACGGTCGCTATGTTATCTCAGGCTCCGGGGATGGAAGTTTGAGAATATGGAGCTCCTTAAGCAATGCAGAGGTAGCGTGCTGGACGAACAACGCTGGAATTCCTGCCGTGGTGAAATGGGCTCCGCGAAGGCTCATGTTTGCGACTGCCTCATATGTTTTAGCGTTTTGGATACCCGACGTGTCCAAATTGTAA
Protein Sequence
- >SELMODRAFT_439216
MAMKIFLVAFFQLMTILFRVHGRNYSLSHGWEVTNNNQLLELQGSQSNASYRLLQAGDSPLLSQSGRFGLAFFRFHNSAEFYFALVLGSSNNTNSGVCVWAANRDSPVTENATVRVTDQGALEVADWDGKVVWSSPGGVSEMELRDTGNFVLYNSTGGISWQSFDNPTDILLEGQVMVTKQRLISSANSSSLASGNIKMEVEPSGLIFFLSRDTRQPYLVWNLYNGNLPADETSINAPCPTYHTELEYSAGQLRLSYQPSTSNPSQLCSVPLTAVLGNSSDDWQYLKLENDGKLVPYTYNSGRASWEQGPPFMRNRLGGCLPMACESNSVCSGNAQCSCIVQDQSGHQEQTCPSPSSIPLVCNHELQNAELFVRKKPKDRTVLLGVSIAASVVLLSALGLVVLMIWKHRLDKVERALALALQGSAQKYTYKELEVATGNFASSLGKGGSGTVYEGTLADGRKGEQALWWYFPAWVVARVSKREFLKVVDTRIRDSVDEDEVKSMLQGGKISSLDFHRTEDLMVTAAEDASIRLYDTASATPMKTLYSARYGVDHICFTHHTNAVIFSSSNGSDESLRYLLLYDNRFLRYFRGHTQRVRGRLSVAYDQQGLVFAVCMEGGAIKLFDGRSFDKGPFDTFLVGGDTVEVAGMKFSNDGKMMLLSTTNSRVYLLDAYSGKKMHGFTLKPSRDGETLEASFSPDGRYVISGSGDGSLRIWSSLSNAEVACWTNNAGIPAVVKWAPRRLMFATASYVLAFWIPDVSKL