Information report for SELMODRAFT_438136
Gene Details
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Functional Annotation
- Early Flowering 6 (ELF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a repressor in the photoperiod pathway. ELF6 interacts with BES1 in a Y2H assay, in vitro, and in Arabidosis protoplasts (based on BiFC). ELF6 may play a role in brassinosteroid signaling by affecting histone methylation in the promoters of BR-responsive genes.
Homologous
- Arabidopsis thaliana: AT5G04240.1
- Brassica napus: GSBRNA2T00136387001, BnaA10G0285500ZS, BnaC09G0604100ZS, GSBRNA2T00072972001
- Brassica oleracea: XP_013611724.1, Bo9g181310
- Brassica rapa: XP_009122624.1, XP_009122623.1, Bra009474
- Cajanus cajan: C.cajan_24710
- Cucumis melo: MELO3C019813, MELO3C019813P1
- Raphanus raphanistrum: RrC1477_p6
- Saccharum spontaneum: Sspon.01G0002960-3C
- Vitis vinifera: GSVIVT01016246001
Gene Resources
- Pfam: PF02373 PF02375
- UniProt: D8QUC4
- RefSeq: XP_002962807.1
- EMBL: GL377567
- AlphaFoldDB: D8QUC4
- KEGG: smo:SELMODRAFT_438136
- OMA: MRFREPS
- InterPro: IPR003347 , IPR003349 , IPR013087 , IPR036236
- PANTHER: PTHR10694 , PTHR10694:SF38
- SUPFAM: SSF51197 , SSF57667
- PROSITE: PS00028 , PS50157 , PS51183 , PS51184
- Gene3D: 2.60.120.650 , 3.30.160.60
- eggNOG: KOG1246 , KOG1721
- STRING: 88036.D8QUC4
- HOGENOM: CLU_001687_1_0_1
Sequences
CDS Sequence
- >SELMODRAFT_438136
ATGGTGGAGGTGGAAGTAGCGCCGTGGATCAAGGGGCTTCCTGTAGCTCCAGAGTATCGCCCCAGCGAGGCCGAGTTTGTGGATCCCATCTCCTTCGTGCTGAGGATCGAGGAGGAAGCTGGGCAGTTTGGGATTTGCAAGATCGTCCCGCCCACCGTGAAGCCGCGCCGGAAGTCGCTCCTTCCAAACCTCTACAGGTCCATAGCCGCGGCCGGGAAATCGTCGGGGAAGAAGGCATCGATTGGGCTCGACGCGAATTCTCTAGCGGGATCCAAGTTTACCACTCGCAAGCAAGAGTTGGGCGATCACACTCACGCTCAAACTCGGCACAGCAAGGGGGCAAGCTATACCTTGGACCAGTTTGAGATCAAGGCCAAGGCTTTTACTCGAGCACAGGTTGGAACTTCCAGGGATGTTGTTCCGGTTGTCTTGGAGGCTCTGTTCTGGAAGACAATCGAGGAGGATAAGCCAGTGACTGTGGAATATGCGGACTATATTCCAGGCTCCGCGTTCCCGGAGAGTGATAGCGAGCAGGGCGATGGCAAGAAAAGGAAGAAGAGTGCTGTGGACAGGGAAGGGTGGAAGCTCGTCAATAGTCCCTGGAACATGAGATACTTGGCGAAGTTACAGGGATCTTTGCTGAGATTCATGCCTGGCGAGGTCCAAGGCGTGACGTCTCCGCTGTTATACATAGCCATGCTCTTCAGCCACTGGTCATGGAGAACCGAGAGCCACGACCTCCACTTTGTGGACTATTTGCATCTGGGTGCTCCGAAGACGTGGTATGTGGTGCCACCCGGCGCGGCTCCTGCTTTCGAGGACGTTTTAAGAAACCAAGACGATAACTCCGTCGTCAGCCCGGAAGTGCTCGTGATCAATGGCGTTCCCTGCTGCAGACTTGTGCAGAACCCTGGAGAGTACGTCATCGTTTTTCCGAGGGCGTATAATTTCAGCTTCAGCCATAGTTTCAATTGCGGTGAAACCAGCAGTTTAGCAAGTCCAGGCTGGTTGAAAGCTGCCAAGCAAGCAGCTGCTCGCAAAGAATTATTATGCCGTCCTCCGATGGTTTGCCATGAGAAATTATTATACCAAACAGCACTAGCATTTGCGAAAAGTTCAAACGCACAGGATGTCCGAAGTTCGAGACTAAAGCACAAAATGAAAGTCGGCGCAGAGGAAGCAGTAAGAACAGAGTTCGTCAACGACATGGCCAAGAATCAACAGGTGCTCGACAAACTCGTTAGCATGACACAGGCAAGGCGGGTTATTCTCAAGGGAGATGACGGGAAGGAGAGTCTCTCCAACCTGGTGAACCTAGGCACAATTGACTCTATCTCGCTGCTATCATTTGTGTGCGAAACCATGGAAGGCGCCGACGAGAAGGTTGGCGATGATAAGACCCTCGGTAAAAACAGTCCTCCTCGAATTGATTGGGGGAATGTGTGCTGTTCCATTTGCGGTATTCTGTGCTACTCTTGCGTAGTGATCGTTCAGCCGACGTCCAAAGCCAGTGAGAGTATTCGGGAAGGAAGATTGACAGTCACAGATGAGAACCACGGACAGGAAGATGAGAATGGGTCGTCTCGGAAGGTTCTACTTCCGAATGGGAGCAGGAAAGCAGGCCGGGATAACTTACAGCGTCCATATATCATGTGCTCGGAGCACGCGTTACAGGTATCCTTGCTGCTCCAAGGTTGCGGGGGAAGCCTCGTGCTGGTTGTTTATCATCCAGAGTATGAGATGTTCGATAAGAATGCGAAGGACTTTGCAATGGATATGAGCATTCGGTGTCGCTTCAGAGATACCACATATGACGAGGAGAACCAGCAGGATTTGCAACTCATCAGCGCTGCAATCGAAGCGGCTGAGAGACCTGACAACGGTTGGATTGATCATGTTCAGGCAAGGCTTCCAGCGACAGCATCCTTTTTAGAAAACAGCAGGGCAGAAACAGACGAAGATGACACTGAATTGGTGGTAGAGAAGACATCGAAGGAGAAGAAAGTAGTCGGGCGTTGGTGTGGTCGGGTCTGGAGACATGATCAGACGCACGCCATTTTAGGAGGGTGCCGAACAGCTTCCAAAGTAGAAGATAACCAGGATGAGTTAGCGGATAGTAAGACCGGGAAAAGTAAAGGCGGCCACGACGAGGACATACTTAAGAGTGAGGACTATGCAAGCCTCAGGAAAAACTGTAGGAAAAGGAAACGGACACAAATGGTTGCAGTATGGCGGGTTGAATCCGAGCCTCAGCCTTGCTCCACGCAAATAAGTGAAAGTCTTCCTTCTGAACTCGAGGCCAACGATGTCAAGACCGAGAATGCTGCTTCTCTTGACGAGGATGTCAAAGTGTCAGAGCCAGAGCTTCGAACGGAGAATCGCTCGTCTGAAGAAGTCCGGCCTCTACCTCCTCTAGTTTGCAAGGAAGAAAAGGAAGAAAACGGGAAGTTGGAGCTGCCGTGTCCTGAGGAAACGACCAAGCCGCTAGTTATCGTGGACTGCAAGGAGGAGCCTGAGATTCATCGTGAAGCTGTGGTTTTGGACGAAGAGGCCCCTCAGGAGAATGTTGCGGCATATAAGGAAGTGTTACCAGCTCCTCTGGAGGAACCTGAGCAGAAATCCAAGGAGAAGGAGCCTGAGCCTGTAGCTGCTGAAAATGAGCCTGTTTCGGTGGTGATCACTGAAGACGATGGTCAGCATGGTGCAGGATCGACGCTCTGTTTCTCAAACAGCGTATGGCATGACGTGCCTATCTCGTTTTCTCCAACTTTTCATTCATCGTACATGGATGAGAAGCCAAAGGCATGGCCGACGGCTCACAGGACGCCATTGAAGATAGGAATCCCAAAGAGGAAAAGGACTCAAATAGCTTCATCTTTGGAGGCTAGCGACGAAGAGAAACAGCTAACAGACGAGGACCTGGAAGAAGATTATGATGAAGAAGAAGAAGAGGAAGACGAGGAGGAGCAGAATTATAGCAATGTGTCAGCTTCGTCTGTTGAGGATGACGAACGCGCTGTGGATGAAGCCGCAGAGTATGGTCTGGAATCCAGAGCTAAGAGGACCAAGCGCAAGAGCTGGAAAGCTCAAGCAGCAGAAGAACAAGAGAAAGCTCCTAGACGAGGAGGAGCGAAGAAGGCTTCGACGTCGACAAAAAGGCCTGGCAGCGAGGCGACGAAGCGCAAGCTTGCTCCCGGCATGGTGCACTCTCATGGACTACACACTTGCGACTTCGATGGATGCACGATGAGCTTCCGAACAGCGAGCGAGCTAGCTCTGCACAAGCGCAACATCTGCACCATCAAGGAGTGCTCCAAGCGCCTCTGCTCGCACAGCTACCTGATGCAGCACTACCGCGTCCATGCCGACGACCGGCCTCTCAAGTGTCCCTGGAAAGGCTGCAAGAAGACGTTCAAATGGTCCTGGGCCCGAACGGAGCACATCCGAGTCCACACCGGCGAGAGGCCCTACGCCTGCACCGAGTGCGGCAAGAGCTACAGAGCTCGCAAGGGAAAAGCAGGAATGCAACAGGCAGGGAAGGAATCCAGGATCAGCCGACCATCGGACAGTCAGACGAGGAACTTGAAAGCTTTGATGGAGAAAGGTTGGATGACGCCAGTGCTTGGAACGAGGACTGGGACTGTGAGACTGAGACTCCGAGAAGACTTGTCTGGAAGGTTTGACGAGCTAGAGCATGCATGGAACGGCACAGGGACAGGGCTTGGAAAAGCTTGGATTTTGGTGAACAGGCATACAGGGCTGGAAGGATGGAAAGTTTTGTGGAGGCTGAAGTTTGGATTTTGA
Protein Sequence
- >SELMODRAFT_438136
MVEVEVAPWIKGLPVAPEYRPSEAEFVDPISFVLRIEEEAGQFGICKIVPPTVKPRRKSLLPNLYRSIAAAGKSSGKKASIGLDANSLAGSKFTTRKQELGDHTHAQTRHSKGASYTLDQFEIKAKAFTRAQVGTSRDVVPVVLEALFWKTIEEDKPVTVEYADYIPGSAFPESDSEQGDGKKRKKSAVDREGWKLVNSPWNMRYLAKLQGSLLRFMPGEVQGVTSPLLYIAMLFSHWSWRTESHDLHFVDYLHLGAPKTWYVVPPGAAPAFEDVLRNQDDNSVVSPEVLVINGVPCCRLVQNPGEYVIVFPRAYNFSFSHSFNCGETSSLASPGWLKAAKQAAARKELLCRPPMVCHEKLLYQTALAFAKSSNAQDVRSSRLKHKMKVGAEEAVRTEFVNDMAKNQQVLDKLVSMTQARRVILKGDDGKESLSNLVNLGTIDSISLLSFVCETMEGADEKVGDDKTLGKNSPPRIDWGNVCCSICGILCYSCVVIVQPTSKASESIREGRLTVTDENHGQEDENGSSRKVLLPNGSRKAGRDNLQRPYIMCSEHALQVSLLLQGCGGSLVLVVYHPEYEMFDKNAKDFAMDMSIRCRFRDTTYDEENQQDLQLISAAIEAAERPDNGWIDHVQARLPATASFLENSRAETDEDDTELVVEKTSKEKKVVGRWCGRVWRHDQTHAILGGCRTASKVEDNQDELADSKTGKSKGGHDEDILKSEDYASLRKNCRKRKRTQMVAVWRVESEPQPCSTQISESLPSELEANDVKTENAASLDEDVKVSEPELRTENRSSEEVRPLPPLVCKEEKEENGKLELPCPEETTKPLVIVDCKEEPEIHREAVVLDEEAPQENVAAYKEVLPAPLEEPEQKSKEKEPEPVAAENEPVSVVITEDDGQHGAGSTLCFSNSVWHDVPISFSPTFHSSYMDEKPKAWPTAHRTPLKIGIPKRKRTQIASSLEASDEEKQLTDEDLEEDYDEEEEEEDEEEQNYSNVSASSVEDDERAVDEAAEYGLESRAKRTKRKSWKAQAAEEQEKAPRRGGAKKASTSTKRPGSEATKRKLAPGMVHSHGLHTCDFDGCTMSFRTASELALHKRNICTIKECSKRLCSHSYLMQHYRVHADDRPLKCPWKGCKKTFKWSWARTEHIRVHTGERPYACTECGKSYRARKGKAGMQQAGKESRISRPSDSQTRNLKALMEKGWMTPVLGTRTGTVRLRLREDLSGRFDELEHAWNGTGTGLGKAWILVNRHTGLEGWKVLWRLKFGF