Information report for SELMODRAFT_179736
Gene Details
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Functional Annotation
- Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167.
Homologous
- Beta vulgaris: Bv4_084470_okdq.t1
- Daucus carota: DCAR_014129
- Lotus japonicus: Lj2g3v3069800.1
- Musa acuminata: GSMUA_Achr5P02450_001, GSMUA_Achr6P19850_001, GSMUA_Achr3P23290_001
- Nicotiana benthamiana: Niben101Scf07640g01014.1
- Nicotiana tabacum: XP_016512804.1
- Sesamum indicum: XP_011097998.1, XP_011097997.1, XP_011097999.1, XP_011097995.1, XP_011098000.1
- Solanum tuberosum: PGSC0003DMP400027884, PGSC0003DMG400015919
- Vitis vinifera: GSVIVT01020805001
Gene Resources
- Pfam: PF02309 PF06507 PF02362
- UniProt: D8SHF1
- RefSeq: XP_002982854.1
- EMBL: GL377620
- AlphaFoldDB: D8SHF1
- KEGG: smo:SELMODRAFT_179736
- OMA: HTIQENQ
- InterPro: IPR003340 , IPR010525 , IPR015300 , IPR033389 , IPR044835 , IPR053793
- PANTHER: PTHR31384 , PTHR31384:SF115
- SUPFAM: SSF101936 , SSF54277
- PROSITE: PS50863 , PS51745
- Gene3D: 2.30.30.1040 , 2.40.330.10 , 3.10.20.90
- CDD: cd10017
- eggNOG: ENOG502QPWF
- STRING: 88036.D8SHF1
- HOGENOM: CLU_002626_2_2_1
Sequences
CDS Sequence
- >SELMODRAFT_179736
ATGTTAGCGGAGCTAGGAGTGTATCAGAGCTCTAAGCCGCAATGCTTCACTCCAGGTGTGAAACGAGGTCCAAATCCGGAGCTTTGGCATGCCTGTGCTGGGCCGCTCGTCTCTCTGCCCTCTGTTGGGACTCGAGTGGTCTACTTCCCCCAAGGCCACAGCGAACAGGTGGCTGCCTCGACCCAGAAGGAGGCCGATGCCGACATTCCTAGCTATCCCAATCTTCCGCCCCATCTCGTTTGTCAACTCCACAACATCACTCTCCATGCTGATACCGAGACGGATGAAGTGTATGCCCAGATGACTCTTCAGCCTATGAATGCTCAAGAGAAGGATTCGTTCATGGTGTCTGACTTGGGCAGACAGAACCGGCAGCCGTCGGAGTATTTTTGTAAAACGCTGACAGCAAGTGACACAAGTACACACGGCGGGTTTTCTATCCCTCGTAGGGCCGCCGAGAAAGTGTTCCCCCCTCTGGACTTTTCCCAGCAACCTCCGGCCCAGGAGATTGTTGCGAGGGATTTACACGACACGGAATGGCGCTTCAGACACATCTATCGAGGCCAGCCACGGCGGCACCTTCTTACGACGGGATGGAGCGTTTTTGTCAGCGCCAAGCGCCTGCAAACTGGCGACGCTGTTCTCTTCATAAGGGACGAGAAGGGGCAACTTCTTCTTGGAATAAGGCGTGCAAACCGGCAGCAAGCATCCATGCCACTGTCGCTGCTGTCAACTGATAGCATGTATATTGGTATTCTTGCGGCCGCAGCGCACGCGAATTCTACGAGCAGTCGATTTACTATATTCTACAATCCCAGAGCTAGCCCATCAGAATTTGTGATCCCTTTGTCAAAGTACTACAATGCAGTATATAACAACATGCAAGTCTCTCCAGGCATGAGGTTTCGAATGCAATTCGAGACTGAGGAGTCTGGAATCCGAAGGCACACAGGTACGATTGTTGGTTCCGGTGATCTGGATCCAGTGCGATGGCCGAATTCTCATTGGCGCTCATTAAAGGTTGAGTGGGACGAGCCTGCCGCTGGCGAAAAGCAGCAACGCATATCCCTTTGGGAGATAGAACCCGCTTCAACACCATACCTCGTCTGTTCTCCGTCTTTCACTTTTCGATCCAAAAGGCCGTGGTCCCAGGCCCCCGTGATACTCGAGGCTTTTAACTCATGTTTGTTTTCACATTCAGGAGAAGTTGAAGCTGTGGACGCAGGAAAATGGATCAAAAGCGAAGGTTTGGAAAAGAACCTGTCATGGAACATGTACTCGGAGCAACTCATGCAGCTCCATCAACGGCCGGACTCTGCCGCGTCAGGGGCGAGGTCGGACTTTTTTCGTCCCGATGACTGCAGCCGGGTTCAAGACGCAACGCATTCGCAAACGCCGAAAGGTTTGCCCATGCAGCAGATTCACATGAAAGGCCAGCAGCAGCAGCATACGCAACTACTGTCTGCGTTACCCCAACAGCAACAAGCTCACGAGTATAACTGCCATCAGCATCAGCAGCAGCAGCAACAGCAGCAGCAGGTTGTTCAACTCTCGCAACAATCGTCCGAGTCTGCATTGCATCTCTCAAGTGGGCCTCAATCCCTGAAGCAGCGTGGGGACTCCAGTGATATTGCCTTGAGCTCCTATGGAAGATCTTACCAGAGCAGTATGCTGGAACAACAGTACGCAAGAAACATAGGCGGTGAGCAAGAAGCCATCCAAATCAAGGATACTCACGGCTGGTACGTGGGAGAGAAGGATTTTCCTACAGAACAGCCACTGCAGTTCGGACATTTGGACGGATACTCTGGCAGTGGGGCCGTGTTCTCTATTAATGACATTGAGCAAGGTGTAACGGCCGGTTTAACTTTCAAGGATGCTCAGCAGCAGCAGGAGCAAGATACGTTGCCTCTAGATTCCAGGAGTCATCTCCTCTTTGGGGTCAGCATAGAGCCCGAATGCATTACTCCTTCGAGCCAGGGGCCGAAATCGAAGGATGGTCAGCAACGAGTTCTCAGTTCGACTGCTTCTGATCTCCACTTGAGCTCAGACAACGGCACCTTGGAAGAACCTGCGTACTTACAGAGAAGTTCTAGCGCGCAGCACATGTTGCCGAGAACATTCACCAAGGTGTATAAGACAGGCTCTGTCGGAAGGTCTCTGGACTTAACACGTCTGAACTGTTACGATGGGCTGAGAAGTGAGCTGGCTCGAATGTTTGGACTTGAGGGACAGCTTGAAGACCCGCACCGATCAGGCTGGCAGCTCGTGTTCGTGGACAACGAAAACGATGTTTTGCTCGTTGGCGACGATCCTTGGGAGGAATTTGTGAGCTGCGTCCGGTGCATCAAAATCATGTCTCCCGCGGAGCTGAGTCACATGAACCAAGAGCAGCTGAATGCCATACAGGCTCGAACGAATGAAGAGTTTACAGAACAGGATGCCAATCCCGGCGTGGAAGTTGAGGAGTTTTAG
Protein Sequence
- >SELMODRAFT_179736
MLAELGVYQSSKPQCFTPGVKRGPNPELWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIPSYPNLPPHLVCQLHNITLHADTETDEVYAQMTLQPMNAQEKDSFMVSDLGRQNRQPSEYFCKTLTASDTSTHGGFSIPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRHLLTTGWSVFVSAKRLQTGDAVLFIRDEKGQLLLGIRRANRQQASMPLSLLSTDSMYIGILAAAAHANSTSSRFTIFYNPRASPSEFVIPLSKYYNAVYNNMQVSPGMRFRMQFETEESGIRRHTGTIVGSGDLDPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIEPASTPYLVCSPSFTFRSKRPWSQAPVILEAFNSCLFSHSGEVEAVDAGKWIKSEGLEKNLSWNMYSEQLMQLHQRPDSAASGARSDFFRPDDCSRVQDATHSQTPKGLPMQQIHMKGQQQQHTQLLSALPQQQQAHEYNCHQHQQQQQQQQQVVQLSQQSSESALHLSSGPQSLKQRGDSSDIALSSYGRSYQSSMLEQQYARNIGGEQEAIQIKDTHGWYVGEKDFPTEQPLQFGHLDGYSGSGAVFSINDIEQGVTAGLTFKDAQQQQEQDTLPLDSRSHLLFGVSIEPECITPSSQGPKSKDGQQRVLSSTASDLHLSSDNGTLEEPAYLQRSSSAQHMLPRTFTKVYKTGSVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGWQLVFVDNENDVLLVGDDPWEEFVSCVRCIKIMSPAELSHMNQEQLNAIQARTNEEFTEQDANPGVEVEEF