Information report for SELMODRAFT_172620
Gene Details
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Functional Annotation
- Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1.
Homologous
- Actinidia chinensis: CEY00_Acc06458
- Beta vulgaris: BVRB_003620
- Glycine max: Glyma.15G093600
- Gossypium hirsutum: Gohir.D06G143000, Gohir.A06G137800, Gohir.A10G041500
- Juglans regia: Jr03_14420
- Manihot esculenta: MANES_15G122100, MANES_17G070700
- Medicago truncatula: Medtr2g019260
- Prunus avium: Pav_sc0003135.1_g540.1.mk
- Prunus persica: PRUPE_4G081400
- Sesamum indicum: SIN_1019602
- Vitis vinifera: VIT_10s0003g03710
Gene Resources
- Pfam: PF00888 PF10557
- UniProt: D8RM97
- RefSeq: XP_002972211.1
- EMBL: GL377584
- AlphaFoldDB: D8RM97
- KEGG: smo:SELMODRAFT_172620
- OMA: KCINLMK
- InterPro: IPR001373 , IPR016157 , IPR016158 , IPR016159 , IPR019559 , IPR036317 , IPR036388 , IPR036390 , IPR045093
- PANTHER: PTHR11932
- SUPFAM: SSF46785 , SSF74788 , SSF75632
- PROSITE: PS01256 , PS50069
- Gene3D: 1.10.10.10 , 1.20.1310.10 , 3.30.230.130
- OrthoDB: D8RM97
- eggNOG: KOG2167
- STRING: 88036.D8RM97
- HOGENOM: CLU_004747_7_2_1
Sequences
CDS Sequence
- >SELMODRAFT_172620
ATGGTTGTGGATGTCAAGGCGACGGGCCACGGGCTGAGCGTGGCCAGCCCCGTCACCGCAGTCGGCCTCGCCGGTGGAAGCAACAGCACCGGGACAACGGCCAATCTCAGCCGCAAGAAGGCAACGCCGCCCCAGCCGACCAAGAAGCTGGTCATCAAGCCCTTCAAAGACAAGCCCAAGCTGCCGGCCAACTTTGAAGACGCTACCTGGGACAAGATTAGAGCCGCCGTGAGCGCCATCCACGTAAAGCAGCCCGTCTCTTGTAGTCTGGAGCAGCTCTATCAGAACGTGGAAGATCTGTGCTTGCACAAGCTTTCGGGAAACCTGTACCAGCGTCTGCAACAAGAATGTGAAACGCACATTTCCGCCAAGCTGTATGCTTTGGTCGGCCAGAGCCCTGATCCCGTCGTCTTTCTCTCCCATGTGGAAAGATGCTGGCAGGATCACTGCGACCAAATGCTCATGATCAGGAGCATTGCACTCTACCTTGACCGCACCTACGTCATACAAAACTCCAGCGTGCGCTCACTCTGGGACATGGGCTTGCAGCTCTTTCGGAAGCATCTCACGTCTTGTCCGGAGGTTGAGCACAAGACAGTTACTGGGATACTGAGGCTCATTGAGAAGGAAAGGACGGGGGAAACTGTTGATCGCACACTTCTTAAGCATCTCTTGAGAATGTTTAGTGCGCTTGGAACATACAGTGAAAGCTTTGAGAAACCATTTATCGACTGCACGGCTGAGTTTTACGCGGCTGAAGGAACACGATACATGCAACAGACTGATGTGCCTGACTACCTTAGGCACGTGGAGGCCAGGTTGCACGAAGAGAACGAGAGATGCTTGCTTTATCTGGATGCCAACACTCGTAAGCACTTGATATCTACCTCAGAGAAGCAGTTGCTTGAGCGCCATTCTCCCACCATTTTGGATAAGGGTTTTGGAATGCTTATGGACGCAAATCGTGTCGCGGACCTTCACCGTATGTACCTTTTACTTGCCAGAGTCGGTGCACTGGAGTCTCTAAAGCAAGCCCTTAGCGCGTACATCAAGGCAACTGGTCATAGCATTATCGTGGACGAGGAGAAGGACAAGGACATGGTTTCTACGCTGCTGGATTTCAAGGCCCGGCTTGATATGATCTGGGAGGAAAGCTTTTCGAAGAACGAACCGTTTGCAAACACAATCAAAGAGGCGTTTGAGCATCTTATAAATTTGAGACAGAACCGACCTGCGGAGCTCATTGCTAAATTTATAGATGGAAAGCTAAGAGCTGGGAACAAAGGAACGTCTGAAGAAGAACTCGAGAGTATGCTTGACAAAGTTTTGGTCCTTTTCAGATACATTCAAGGTAAGGATGTCTTTGAAGCATTTTACAAAAAGGATCTGGCAAAACGCTTGCTATTGGGCAAAAGCGCATCTATCGATGCTGAAAAGTCCATGATTTCGAAGCTAAAAACTGAGTGTGGTAGTCAATTTACAAATAAACTCGAAGGCATGTTCAAGGACATTGAACTTTCAAGGGAAATAAACGAGTCCTTTAAGCAATCCTCACAAGCCAGGACAAAGCTACCAGCTGGAATTGAGATGAATGTGCATGTGTTGACCACCGGGTATTGGCCTACGTACCCGCCTATGGATATTCGTCTTCCTCATGAACTCAATGTCTATCAGGACATATTCAAGCAATTTTACTTGAGCAAGCACAGTGGCAGGCGGCTGATGTGGCAGAATTCTTTGGGTCATTGTGTTTTGAAAGCCGAGTTTCCCAAGGGTAAGAGGGAACTATCTGTTTCACTATTTCAGACGGTGGTACTTATGCTTTTCAACGATTCATTAAGGCTTAGCTTTCAAGACATAAAGGACTCAACGGGTATTGAAGACAAAGAGCTCCGCAGGACTCTGCAGTCCTTGGCTTGCGGCAAGGTTCGAATTTTGCAAAAGCAACCCAAAGGGAGAGAGGTGGAGGACGACGACGTGTTTACGTTCAATGAGGACTTCACGGCTCCTTTGTTCCGGATCAAGGTGAATGCAATACAGCTCAAAGAGACGGTTGAAGAGAATGCAAGTACCACAGAGAGAGTATTCCAGGATCGGCAGTATCAGATTGATGCGGCCATTGTAAGAATTATGAAGACTAGGAAGGTCCTGAGCCACACTTTACTGATAACGGAGCTGTTCCAACAGCTCAAGTTCCCTATAAAGCCAGCGGACTTGAAGAAACGTATCGAGAGCCTGATCGACCGCGAGTACTTGGAGCGAGACAAGAACAACCCTCAGGTATACAATTATCTCGCATGA
Protein Sequence
- >SELMODRAFT_172620
MVVDVKATGHGLSVASPVTAVGLAGGSNSTGTTANLSRKKATPPQPTKKLVIKPFKDKPKLPANFEDATWDKIRAAVSAIHVKQPVSCSLEQLYQNVEDLCLHKLSGNLYQRLQQECETHISAKLYALVGQSPDPVVFLSHVERCWQDHCDQMLMIRSIALYLDRTYVIQNSSVRSLWDMGLQLFRKHLTSCPEVEHKTVTGILRLIEKERTGETVDRTLLKHLLRMFSALGTYSESFEKPFIDCTAEFYAAEGTRYMQQTDVPDYLRHVEARLHEENERCLLYLDANTRKHLISTSEKQLLERHSPTILDKGFGMLMDANRVADLHRMYLLLARVGALESLKQALSAYIKATGHSIIVDEEKDKDMVSTLLDFKARLDMIWEESFSKNEPFANTIKEAFEHLINLRQNRPAELIAKFIDGKLRAGNKGTSEEELESMLDKVLVLFRYIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSREINESFKQSSQARTKLPAGIEMNVHVLTTGYWPTYPPMDIRLPHELNVYQDIFKQFYLSKHSGRRLMWQNSLGHCVLKAEFPKGKRELSVSLFQTVVLMLFNDSLRLSFQDIKDSTGIEDKELRRTLQSLACGKVRILQKQPKGREVEDDDVFTFNEDFTAPLFRIKVNAIQLKETVEENASTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQVYNYLA