Information report for SELMODRAFT_114794
Gene Details
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Functional Annotation
- RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.
Homologous
- Arabidopsis thaliana — AT5G07350
Gene Resources
- Pfam: PF00565 PF00567
- UniProt: D8SE51
- RefSeq: XP_002981628.1
- EMBL: GL377614
- AlphaFoldDB: D8SE51
- KEGG: smo:SELMODRAFT_114794
- OMA: ARCADHH
- InterPro: IPR002999 , IPR016071 , IPR016685 , IPR035437 , IPR047395
- PANTHER: PTHR12302 , PTHR12302:SF2
- SUPFAM: SSF50199 , SSF63748
- PROSITE: PS50304 , PS50830
- Gene3D: 2.30.30.140 , 2.40.50.90
- CDD: cd20443
- eggNOG: KOG2039
- STRING: 88036.D8SE51
- HOGENOM: CLU_005966_2_0_1
Sequences
CDS Sequence
- >SELMODRAFT_114794
ATGGCGGGATGGTTCAAGGGGACGGTCAAGGCTGTGCCATCCGGGGATTCTCTGGTGATCATGGGAACCGCCAAGGAAGGAATCCCGCCAGAAAAGTCCATCACGCTTTCCTCGCTCATGGCTCCAAGGCTGGCCCGAAGGGACACCAGCGATGAGCCTTTCGCATGGGACAGCCGGGAGTTTCTCAGGAACAAATGCATCGGGAAGGAGGTGACTTTTAAGGTGGACTATGCCGTTGCAAACCTCAACAACAGAGAATTTGGCTCTGTGTTTATGGATGACGCCAACGTCGCGCTTGCCGTTGCCAGCGCTGGATGGGCCAAGGTCCGACAAGGTGCAGAGAAGAGTCCTTTTATCGAGGAACTCCTCAAGGCTGAAGAACAAGCACGGCAGCAGGGCCTTGGAATATGGAACAAGGTACGAAATGGAGGAGCTGGCGAGCGATCCATACGCTCAATCCCCCCATCTGCAATCGGTGACACGTCCACCTTTGATGCCCGTGCTCTCCTTGAGTCTAGCAAGGGGAAGCCTCTTCGGGCATTTGTGGAGCAAGTGAGGGACGGGAGCTCATTCCGAGTCTATTTACTCCCAAGCTTTCAGTTTGTACAGGTGCATCTAGCTGGAGTTCAGGCTCCGTCAATGGGAAGACGGGTGGCTCCGGCCAGTGCGGGAGGTGGCGGAGATGCCAAAGACGCGGAAAACGGAGAGGCAGGAGAGGGAGCAGCGGCACCAACGACACTTACCACTGCTCAGAAGCTGGCAGCGTCCACCAACCTGGAAGCTCCCGAGGAATGGGCAAGAGAGGCAAAGCACTTCACGGAGTGCAGGATCTTGCATAGAGAAGTTATAATCGTCTTGGAAGGGACGGACAAGTTCAACACCTTGTTTGGGTCTGTCAAATACAAAGAGACTGTAGACCTTGCCTTGGAACTCTTGCAACAGGGCCTGGCTAAGTACGCCGAATGGAGTGCCAACATGCTGGAAGAAGACGAGAAGCGCCGCCTCAAAGCTGCTGAACTTCAAGCCAAGAAGGACAGGCTCCGGCTGTTTGCTGGATTCGTCCCGCAGATCAATACCAAGGCCATCAAGAACGATGTCTTCACTGGACAGGTGATAGAGGTGACGAGCGCCGACTGCATCGTTGTCGCCGATGACGCGATCCCGCTGGGAAGACCGAATTGGGACCGTCGTGTTAATCTGTCGAGTATTCAGGCACCCAAGAGAACTGATGCGGAAGCGCGCTTCAGGGAGGCCAAGGAGTTCCTCCGCTCCCGCCTTATCGGGCAGCAGGTGCGTGTGTTTATGGAGTACTCCCGGACCATTACCACCGATTCCGAGGCCGGAGGGACCCGGCTTCTTGAGTTTGGTTCCGTGTTCTTGTCGTCGGCTCCCCAGGGCGCCGAGGTGTTTGAGCCGCCGCTGCCCGGGCAACCCGAGGGCTTTAACGTGGCAGAGCTGGTGCTGGCCAATGGACACGCTCAGGTTGTGCGGCACAGAGATTTTGATGATCGCTCGCATTATTACGACAACTTAGTCGCTGCCGAGAGAAAATCTCAGAAGCCCGGGAAGAAAGGAACGCCTCCCAGTGCGCCAGCCCATATCAACGATTTGACTATGGCCTTGCTTGCGAGCAAGGCCAAGCAGTTCTTGCCATTCCTCCAGAGAGCAAGGCGGCTGTCTGCAGTTGTGGACTTCGTACTGAGCGGTCATCGGTACAAGCTGTTTGTTCCCAAAGAGACATGCTTGATATTCTTTTCACTCTCGGGAGTGAGGTGTCCTGGGAAAGGCGAGCCTTATTCAGACGAAGCGCTCGCTTTCATGCGGCGACGGGTGTCACAGCGTGACGTTGAGATTGAAGTAGAGACAGCGGATAGAACTGGAACTTTCCTTGGTAGCCTTTACGAGGGGAAAGTAAACGTCGCTATCGGCCTCTTGGAAGCAGGGCTGGCTAAGCTGCAGCCAGGTTTCGCGGAGAGGATCACGGATGGCCATCTCCTCATGCAGGCCGAAGAGCATGCGAGAACGCAACGTCTCAAGATCTGGGAGAATGTTAGCGACGATGGAGAATCCGAGAAGCAATCGACGGACAAGCCTTCCAAGCAAGAAGTCTTTCAGGTGCAAGTTACGCAAGTGCTGGCTGGCGGATCATTTTATGTGCAAGAAGTGAGCGATACCCGGGCGTCCAGCATTCAGCAGCAACTTGAATCGTTGAGCCTTTCTGAAAAGGCAGCCCCCGCAGGTTTTACTCCGGAAAGGGGACAGCTAGTACTGGCTAACTATGACGGTGCTTGGTATCGTGGCCTGGTTGTGAACGCTCCAAAGGCTGGCAAGGGTGAATACGAGGTGTTTTATATCGACTATGGAAACCAGGAAGTGGTTCCTTTGTCTCAACTGCGGCCCATTGACCCCTCGGTGGCTGGGACGCCAGGCCTGGCGCAGTGGTGCAGCCTTGCCCACGTCAGAGTACCCGGTGAAGGAGAGGAATTTTGCGAAGAGGCGGCCGAGTTTATCTGCACAAGCAAGACGATGATGGCCAAGGTGGAGGGACGGGACGCGTCCGGCGGCAAGGTCAAAGGCCAGGGAAGTGGGACGCGGCTCATTGTGACGCTAGTGGACGTTGACACGAGCATGAGCGTGAATGCGGGGCTTTTGGAGGCTGGGCTTGCAAGGGTGGAGAAGGCTGGCAAGTGGGACAGCAAGGAGAAGAGGGCCGCCTTGGAGGCGTTGGCGGAGCACCAAGAGAAAGCTCGCAAGGCGAGATTGAACATCTGGCAGTATGGTGATGTGGATGGAAGCGACGACGAAGATAAGGGACCGGGAGCACGTAGAGGAGGACGCAAGTAA
Protein Sequence
- >SELMODRAFT_114794
MAGWFKGTVKAVPSGDSLVIMGTAKEGIPPEKSITLSSLMAPRLARRDTSDEPFAWDSREFLRNKCIGKEVTFKVDYAVANLNNREFGSVFMDDANVALAVASAGWAKVRQGAEKSPFIEELLKAEEQARQQGLGIWNKVRNGGAGERSIRSIPPSAIGDTSTFDARALLESSKGKPLRAFVEQVRDGSSFRVYLLPSFQFVQVHLAGVQAPSMGRRVAPASAGGGGDAKDAENGEAGEGAAAPTTLTTAQKLAASTNLEAPEEWAREAKHFTECRILHREVIIVLEGTDKFNTLFGSVKYKETVDLALELLQQGLAKYAEWSANMLEEDEKRRLKAAELQAKKDRLRLFAGFVPQINTKAIKNDVFTGQVIEVTSADCIVVADDAIPLGRPNWDRRVNLSSIQAPKRTDAEARFREAKEFLRSRLIGQQVRVFMEYSRTITTDSEAGGTRLLEFGSVFLSSAPQGAEVFEPPLPGQPEGFNVAELVLANGHAQVVRHRDFDDRSHYYDNLVAAERKSQKPGKKGTPPSAPAHINDLTMALLASKAKQFLPFLQRARRLSAVVDFVLSGHRYKLFVPKETCLIFFSLSGVRCPGKGEPYSDEALAFMRRRVSQRDVEIEVETADRTGTFLGSLYEGKVNVAIGLLEAGLAKLQPGFAERITDGHLLMQAEEHARTQRLKIWENVSDDGESEKQSTDKPSKQEVFQVQVTQVLAGGSFYVQEVSDTRASSIQQQLESLSLSEKAAPAGFTPERGQLVLANYDGAWYRGLVVNAPKAGKGEYEVFYIDYGNQEVVPLSQLRPIDPSVAGTPGLAQWCSLAHVRVPGEGEEFCEEAAEFICTSKTMMAKVEGRDASGGKVKGQGSGTRLIVTLVDVDTSMSVNAGLLEAGLARVEKAGKWDSKEKRAALEALAEHQEKARKARLNIWQYGDVDGSDDEDKGPGARRGGRK