Information report for scaffold_800214.1
Gene Details
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Functional Annotation
- Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1.
Homologous
- Brassica napus: BnaA06G0425600ZS, BnaA02G0298300ZS, BnaC07G0247200ZS, BnaC02G0406700ZS, BnaC09G0238500ZS
- Brassica oleracea: Bo7g074140, Bo2g129860, Bo9g063040
- Brassica rapa: Bra022023, Bra017569, Bra025031
- Gossypium hirsutum: Gohir.A06G137800, Gohir.D06G143000, Gohir.A06G196800
- Manihot esculenta: MANES_15G122100, MANES_17G070700
- Prunus persica: PRUPE_4G081400
Gene Resources
- Pfam: PF00888 PF10557
- UniProt: D7MRZ6
- EMBL: GL348720
- AlphaFoldDB: D7MRZ6
- KEGG: aly:9301278
- InterPro: IPR001373 , IPR016157 , IPR016158 , IPR016159 , IPR019559 , IPR036317 , IPR036388 , IPR036390 , IPR045093
- PANTHER: PTHR11932
- SUPFAM: SSF46785 , SSF74788 , SSF75632
- PROSITE: PS01256 , PS50069
- Gene3D: 1.10.10.10 , 1.20.1310.10 , 3.30.230.130
- OrthoDB: D7MRZ6
- eggNOG: KOG2167
- STRING: 81972.D7MRZ6
- HOGENOM: CLU_004747_7_2_1
Sequences
gDNA Sequence
- >scaffold_800214.1
ACAATTTTCACCCATTTTCATGTCTCTTCCTACCAAACGCTCTACTTTCTCCGCCGCTTCTGCCTCCGACGACTCTTCTTACTCTTCTCCTCCGATGAAAAAGGCTAAAAACGACCTCCACCATTCCCCGCAACACCCTAACACCGCCGACAAGGTTGGCTTTCATATGGAGGAAGATCCAACTCCCGCCGCTGCGAATCTCTCTCGGAAGAAAGCTACACTACCGCAACCTACTAAGAAGCTTGTAATCAAGCTCAATAAAGGTTTCGCTCGATTTCGATTTTTTCATTTTTGCGATTTTGATCGTAATCTTTGGATTCGATTTGTGTGTTTTACTCTAGTGTGAAATTGATGCTCTGGATTGATTGGAAATGACTCTATGTATGTACGATTGTTAGGGTTCGTGATTTTTAGGGTTTTCATTGGCTTGCGATTGATGGATACTTTTGATGTTATATTACAGTGGAAAATTGAGTGTGACTGTTGATTTTTGATGTGAATGAGTGATTTGGGTTTTTGTATTTCTTTTAAGTTGGAATCTCTTTGTCTAGCCTGATCTAGGTATTTAAGATCCGGAATCTTTGTTGTGCACAATCTAGTTCTCACCAAACCTGATTTGTGCCATTAGAAAACATCTTGAGAATCATTATTACTGTGACTGGCTACCAAATTGAAGATAAAACTGTTTCCGTCATCATTTTAAAGGGTTCTGATTGTACCATTTGTAATATATATATGTGTGAAGCCAAACCAACCTTGCCAACAAACTTTGAGGAGACTACATGGGAGAAGTTGCAGTCAGCTATCAGAGCTATATTTCTCAAAAAACCATTTTCTTTTGACCTCGAGAGCCTCTACCAGGTTTGGTTACTTGCAAATTTACTAGCTTCCTTTCTTTTTGTATGTGTAAATGTCGTGCTGATGAGATGGTGACACTGTTTTTCCAGGCTGTTGATAACCTTTGCTTGCATAAGTTGGAAGGAAAGCTTTATGACCAGATTGAGAAGGAGTGTGAAGAACACATCTCTGCAGCTTTGCAATCTTTAGTTGGGCAGAACACTGATCTGACTGTTTTCTTGTCACTTGTTGAGAAATGCTGGCAAGACTTTTGTGACCAGATGCTCATGATCCGTAGTATAGCCTTGACTCTGGATAGGAAGTATGTGATACAAAATCCAAATGTACGTTCATTATGGGAGATGGGTTTGCAGCTTTTCCGGAAGCATCTTTCTCTGGCCCCTGAAGTTGAGCAGAGGACTGTTAAAGGTCTCTTAAGTATGATTGAAAAAGAAAGGTAATTTTGTAACCTTCTGGTCTTTCAAAAATTAAACAAGGTTGATTTGTCACATTGGGAATGTTTCTTCATAAAGCTTAGCCACCATTACCTCAACTTATTTTTCTGGCTTGAGTGAATCATGGGAAGTTTTGGATGGTCTATGAACTATTCCTGTCTAGTAGTGATAACTAGTTATAGGTAAAATTTCAAGGCAAATCAGCACTAGTGTAAGTCATTTATATATTGGATAATGTTTTAATCTGAATCTGCTGACCTTTCTTGCATGATATTGGTCCTGCAGATTAGCAGAAGCTGTTAATAGGACTCTACTAAGCCATCTTTTGAAGATGTTTACTGCACTGGGAATATATATGGATAGCTTTGAGAAACCTTTCCTTGAAGGGACTTCTGAATTTTACGCTGCTGAAGGAATGAAATACATGCAGCAGTCTGACGTTCCGGAGTACCTGAAGCATGTTGAGGTGCCTTGCATGACTTCATATAGTTTCCTTATGATAAGCTGCAGTACATGTTAATAGTCTTTCTAAGGTTTCTACTGGTGATTGGTGCAGGGAAGGTTGCATGAAGAGAATGAAAGATGCATACTCTACATAGATGCAGTAACAAGGAAACCATTGATCGCAACTGTTGAAAGGCAGCTTCTCGAACGTCATATACTTGTTGTTCTTGATAAGGTTTCACTCCTGTTATCCTTTTGGCGGTGTGCATATTAGCTAATTTTAGTTTGTCGTAGTCTTACTTTATCTCTGAACATCTCCAGGGGTTTACAACATTAATGGATGGACGTCGTACTGAGGACCTTCAGAGGATGCAAACCCTGTTTTCTAGGGTCAATGCACTTGAGTCTCTGAGGCAGGCGCTAAGTTCATATGTTCGGAAAACTGGGCAGAAGATTGTTATGGATGAAGAGAAAGATAAAGACATGGTACAATCACTATTGGACTTCAAGGCTTCTCTTGACGTAATATGGGAAGAGAGCTTTAATAAGAACGAATCATTTGGTAACACAATCAAAGATTCATTTGAGCATCTGATTAATCTTCGTCAGGTATTAAATATTGATTTTCTTGATTGTTGCATGAGTCTCTTGCCAACAATTTTACTTTCATCTAAAAACAACATGCTGATTATTGTGGAAATGTCAAACCTTAAGTTACAATGGTGCAATTGAGGAATTTATATTCTATAATAATCTAGAGATTTTTCGTTATTGGTTAAGCATTGTATTGCTATGATTTGGAGACATCTTTGGGCAGTGGATACAATTTTCAAACATAATAATTTTGAGAACAAGCTTCTTGTGGGCACTGGACCTGATTACAGTAGTGTTTTTTTGCTAGTATATATCATTTGGTTACCAAATACTCTGATTTAGCATGCATCCCAATAATATACATCTTATGCTCTTGATCTATTTTGCAGAACCGGCCAGCTGAGCTTATTGCCAAGTTTTTGGACGAGAAGCTCCGTGCTGGGAATAAGGGTACTTCTGAAGAAGAACTGGAGAGTACACTTGAAAAAGTCTTGGTTTTGTTCAGATTTATCCAGGTTATCTCTAATTTCTTACATCTATATTGTATTTGTCACTGTAAATCACGAAATCGAGGCCCAGTGCATGGTCTGTAAACCAGCTATTTGATCTTCTAGATATCGGTTTTGCTGATGGATTTTTAATTTTTTTTCAAAGGGTAAAGATGTGTTCGAAGCATTTTACAAAAAGGATCTTGCGAAGAGACTCCTGTTGGGAAAGAGTGCTTCAATTGATGCCGAGAAATCCATGATATCTAAGGTTAAATTTACTTCCTGGGTGTTTCCCTTTCCCACAATTTGTTTTCTATATCGGTAGCTCATACCCACTGACCCCAACCTTGGTTTTGCCTACAGCTTAAAACTGAGTGTGGTAGCCAGTTTACAAACAAGCTCGAAGGGATGTTCAAGGTACTCTTTCCTTCTCCTTCTCTATTTTCAAAAAGGATGTTGGTCGTTTAAGTTTTACGAAGGAACAAACTTAATGATCTTATATTTTGTTACACTTACGATATATCCCAGTATACATATTAATTGTTACTTAATCCAATCTTAGATAAGATTGTTGGATGATCCTGCACCAGACCTACTTTAATGAGCTAGTGTACATGTACAATAATCCTAATGAGCTTGAACTCTCTGTTTAATTGAAATTTTCTCCAGGATATTGAATTGTCAAAGGAAATCAATGAGTCATTCAAACAATCTTCTCAGGCCAGAACCAAACTACCATCGGGAATTGAGATGAGTGTCCACGTGTTAACAACAGGGTACGTACTATGTATCAATTTCATCCAGGATTCAACTGCTGGAATGCGTGATAGCATGACATATATAAAGCTTGTTAACTTTTCATGTATAATGCAGTTACTGGCCAACATATCCACCTATGGATGTTAAGCTTCCTCATGAACTAAATGTCTATCAGGTTTTACCAAAAGTTCTTCTTATGTATTATTTCGTTTCCTCTTTAGATTTTTTCTTACAAGCCTTTTTTCTAAGTTATCTGTTTGTTGCGTAGGATATCTTCAAAGAGTTCTATTTAAGCAAGTACAGTGGTAGGAGGTTAATGTGGCAAAACTCATTAGGCCACTGTGTTTTAAAGGCAGATTTCTCCAGAGGTAAAAAGGAGCTGGCTGTTTCCCTGTTTCAGGTCAGTCGAATTTTCTCTTTTTCCTTTTTAAGCTCTTTCCTGTCTTCCCAAGGTTACAGTGTGAATCAATTGCTTTAAAAAGGTCTTTTCTTTTTGTCTCAGGCTGTTGTGTTGATGTTATTTAACGATGCAATGAAACTTAGCTTTGAAGACATTAAAGATTCCACCAGCATAGAGGACAAAGAGCTGAGGAGGACGTTGCAGTCGCTTGCTTGTGGGAAAGTTCGTGTCCTGCAGAAGGTTAGGCCAAATCTGGACTCTGTTAACTCTCTTTAAAGCTAATGCAGAAACTGCTGAGATTGTGGCGTTCCCTTTTTTCACAAGGATGAGCCTTATTGTGTAAATGTTTTTTGCAGAATCCAAAGGGAAGAGATGTAGAAGATGGTGATGAATTTGAGTTTAATGACGACTTTGCAGCTCCGCTATATCGCATTAAGGTACGTCGTTTTTTTCTTGGTCTCTTCACTTAAAGTATCCTAGAATCTTGTGATACTGTTTTCTGTGTAGCATATAGTGAACCTATTCTTTCTTTTGTTCCTGGTGCAGGTAAATGCAATCCAGATGAAAGAGACAGTGGAGGAGAACACAAGTACAACGGAAAGAGTATTCCAGGACCGACAATACCAGGTTGGTTTCTGCTCAATTTTCCTTTACGATACTATTTTCTTAAATCTTTCTTACAACTTGGCTCCTTAATGAGAGAAGCTTTTGACAAAATGGCTTTCCCCATCACACCCTTATCTTACAGATCGATGCAGCCATTGTTCGTATTATGAAGACAAGAAAAGTCTTAAGCCATACTCTTCTAATCACTGAGCTCTTCCAACAGGTAACTTTCTTTCATCCTGCTTGATGATTTCAAAATCCTAAAGTAAGATTAAAAAATAGAACTGTATTTTAAACTGGGTGTCTCGGGATGATTAACCAGATAAAGAATATGTCAGTATAAAAACATGAAATTCGTTACTCGGTCCAGTCCTACTGGTAATGTACTCATGATGATGATAATGATGGGCATTCTCAGTACTCTACTAAATTTAATATACCACGCTATGAATGGATTGTGTTTGTGAATTTGCAGCTGAAATTCCCGATAAAGCCTGCTGATCTGAAGAAGAGGATTGAAAGCTTGATCGATCGAGAATATTTGGAGAGGGAAAAAAGCAACCCTCAGATATACAATTATCTTGCTTAGAATCTCTCTGGTAAACGCCT
CDS Sequence
- >scaffold_800214.1
ATGTCTCTTCCTACCAAACGCTCTACTTTCTCCGCCGCTTCTGCCTCCGACGACTCTTCTTACTCTTCTCCTCCGATGAAAAAGGCTAAAAACGACCTCCACCATTCCCCGCAACACCCTAACACCGCCGACAAGGTTGGCTTTCATATGGAGGAAGATCCAACTCCCGCCGCTGCGAATCTCTCTCGGAAGAAAGCTACACTACCGCAACCTACTAAGAAGCTTGTAATCAAGCTCAATAAAGCCAAACCAACCTTGCCAACAAACTTTGAGGAGACTACATGGGAGAAGTTGCAGTCAGCTATCAGAGCTATATTTCTCAAAAAACCATTTTCTTTTGACCTCGAGAGCCTCTACCAGGCTGTTGATAACCTTTGCTTGCATAAGTTGGAAGGAAAGCTTTATGACCAGATTGAGAAGGAGTGTGAAGAACACATCTCTGCAGCTTTGCAATCTTTAGTTGGGCAGAACACTGATCTGACTGTTTTCTTGTCACTTGTTGAGAAATGCTGGCAAGACTTTTGTGACCAGATGCTCATGATCCGTAGTATAGCCTTGACTCTGGATAGGAAGTATGTGATACAAAATCCAAATGTACGTTCATTATGGGAGATGGGTTTGCAGCTTTTCCGGAAGCATCTTTCTCTGGCCCCTGAAGTTGAGCAGAGGACTGTTAAAGGTCTCTTAAGTATGATTGAAAAAGAAAGATTAGCAGAAGCTGTTAATAGGACTCTACTAAGCCATCTTTTGAAGATGTTTACTGCACTGGGAATATATATGGATAGCTTTGAGAAACCTTTCCTTGAAGGGACTTCTGAATTTTACGCTGCTGAAGGAATGAAATACATGCAGCAGTCTGACGTTCCGGAGTACCTGAAGCATGTTGAGGGAAGGTTGCATGAAGAGAATGAAAGATGCATACTCTACATAGATGCAGTAACAAGGAAACCATTGATCGCAACTGTTGAAAGGCAGCTTCTCGAACGTCATATACTTGTTGTTCTTGATAAGGGGTTTACAACATTAATGGATGGACGTCGTACTGAGGACCTTCAGAGGATGCAAACCCTGTTTTCTAGGGTCAATGCACTTGAGTCTCTGAGGCAGGCGCTAAGTTCATATGTTCGGAAAACTGGGCAGAAGATTGTTATGGATGAAGAGAAAGATAAAGACATGGTACAATCACTATTGGACTTCAAGGCTTCTCTTGACGTAATATGGGAAGAGAGCTTTAATAAGAACGAATCATTTGGTAACACAATCAAAGATTCATTTGAGCATCTGATTAATCTTCGTCAGAACCGGCCAGCTGAGCTTATTGCCAAGTTTTTGGACGAGAAGCTCCGTGCTGGGAATAAGGGTACTTCTGAAGAAGAACTGGAGAGTACACTTGAAAAAGTCTTGGTTTTGTTCAGATTTATCCAGGGTAAAGATGTGTTCGAAGCATTTTACAAAAAGGATCTTGCGAAGAGACTCCTGTTGGGAAAGAGTGCTTCAATTGATGCCGAGAAATCCATGATATCTAAGCTTAAAACTGAGTGTGGTAGCCAGTTTACAAACAAGCTCGAAGGGATGTTCAAGGATATTGAATTGTCAAAGGAAATCAATGAGTCATTCAAACAATCTTCTCAGGCCAGAACCAAACTACCATCGGGAATTGAGATGAGTGTCCACGTGTTAACAACAGGTTACTGGCCAACATATCCACCTATGGATGTTAAGCTTCCTCATGAACTAAATGTCTATCAGGATATCTTCAAAGAGTTCTATTTAAGCAAGTACAGTGGTAGGAGGTTAATGTGGCAAAACTCATTAGGCCACTGTGTTTTAAAGGCAGATTTCTCCAGAGGTAAAAAGGAGCTGGCTGTTTCCCTGTTTCAGGCTGTTGTGTTGATGTTATTTAACGATGCAATGAAACTTAGCTTTGAAGACATTAAAGATTCCACCAGCATAGAGGACAAAGAGCTGAGGAGGACGTTGCAGTCGCTTGCTTGTGGGAAAGTTCGTGTCCTGCAGAAGAATCCAAAGGGAAGAGATGTAGAAGATGGTGATGAATTTGAGTTTAATGACGACTTTGCAGCTCCGCTATATCGCATTAAGGTAAATGCAATCCAGATGAAAGAGACAGTGGAGGAGAACACAAGTACAACGGAAAGAGTATTCCAGGACCGACAATACCAGATCGATGCAGCCATTGTTCGTATTATGAAGACAAGAAAAGTCTTAAGCCATACTCTTCTAATCACTGAGCTCTTCCAACAGCTGAAATTCCCGATAAAGCCTGCTGATCTGAAGAAGAGGATTGAAAGCTTGATCGATCGAGAATATTTGGAGAGGGAAAAAAGCAACCCTCAGATATACAATTATCTTGCTTAG
Protein Sequence
- >scaffold_800214.1
MSLPTKRSTFSAASASDDSSYSSPPMKKAKNDLHHSPQHPNTADKVGFHMEEDPTPAAANLSRKKATLPQPTKKLVIKLNKAKPTLPTNFEETTWEKLQSAIRAIFLKKPFSFDLESLYQAVDNLCLHKLEGKLYDQIEKECEEHISAALQSLVGQNTDLTVFLSLVEKCWQDFCDQMLMIRSIALTLDRKYVIQNPNVRSLWEMGLQLFRKHLSLAPEVEQRTVKGLLSMIEKERLAEAVNRTLLSHLLKMFTALGIYMDSFEKPFLEGTSEFYAAEGMKYMQQSDVPEYLKHVEGRLHEENERCILYIDAVTRKPLIATVERQLLERHILVVLDKGFTTLMDGRRTEDLQRMQTLFSRVNALESLRQALSSYVRKTGQKIVMDEEKDKDMVQSLLDFKASLDVIWEESFNKNESFGNTIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELESTLEKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFSRGKKELAVSLFQAVVLMLFNDAMKLSFEDIKDSTSIEDKELRRTLQSLACGKVRVLQKNPKGRDVEDGDEFEFNDDFAAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLEREKSNPQIYNYLA