Information report for scaffold_702875.1
Gene Details
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Functional Annotation
- Encodes a phytochrome photoreceptor with a function similar to that of phyB that absorbs the red/far-red part of the light spectrum and is involved in light responses. It cannot compensate for phyB loss in Arabidopsis but can substitute for tobacco phyB in vivo.;Encodes photoreceptor phytochrome B
Homologous
- Brassica napus: BnaA05G0387100ZS, BnaC05G0432200ZS, BnaC03G0420100ZS
- Brassica oleracea: Bo5g123510, Bo3g068620
- Brassica rapa: Bra022192
- Citrullus lanatus: Cla97C05G088180
- Cucumis melo: MELO3C006717
- Cucumis sativus: SH3.1
- Gossypium hirsutum: Gohir.D10G179000, Gohir.A10G172500
- Juglans regia: Jr07_11560
- Manihot esculenta: MANES_03G205100
- Populus trichocarpa: POPTR_008G105200v3
- Vitis vinifera: VIT_05s0077g00940
Gene Resources
- Pfam: PF01590 PF02518 PF00512 PF00989 PF08446 PF00360
- UniProt: D7M9X6
- EMBL: GL348719
- AlphaFoldDB: D7M9X6
- KEGG: aly:9304220
- InterPro: IPR000014 , IPR001294 , IPR003018 , IPR003594 , IPR003661 , IPR005467 , IPR012129 , IPR013515 , IPR013516 , IPR013654 , IPR013767 , IPR016132 , IPR029016 , IPR035965 , IPR036890 , IPR043150 , IPR044767
- PANTHER: PTHR47876 , PTHR47876:SF3
- SUPFAM: SSF55781 , SSF55785 , SSF55874
- PROSITE: PS00245 , PS50046 , PS50109 , PS50112
- Gene3D: 3.30.450.20 , 3.30.450.270 , 3.30.450.40 , 3.30.565.10
- OrthoDB: D7M9X6
- CDD: cd00082 , cd00130 , cd16932
- eggNOG: ENOG502QPNJ
- STRING: 81972.D7M9X6
- HOGENOM: CLU_010418_0_0_1
Sequences
gDNA Sequence
- >scaffold_702875.1
AAAACGATTAGCTAAGAAAAATGGTCTCCGGAAGCGGTAGCAAAACCAGCGGTGCAGAGGCAGCTTCGTCAGGCCATCGCGTCAATCGGAGCCGTCACACCAGCGCAGAACAAGCTCAGTCGTCAGCAAGCAAAGCCCAAAGGTCACAGAATCAGCAGCCGCAAAACCACGGCGCCGGAACAGAATCCACAAGCAAAGCAATTCAACAGTACACTGTCGACGCGAGACTTCACGCCGTCTTCGAACAATCCGGAGAGTCAGGTAAGTCGTTCGATTACTCGCAGTCTCTTAAAACGGCGCCGTACGATCCTTCCGTACCGGAGCAGCAGATCACAGCTTATCTCTCGCGAATCCAACGCGGTGGCTATACCCAGCCTTTTGGCTGCTTGATCGCCGTCGAAGAATCCACTTTCACAATCATCGGTTACAGTGAAAATGCGCGGGAAATGCTAGGGCTCATGTCTCAATCTGTACCAAGCATCAAGGAGATATCGGAGGTTCTTACGATTGGTACGGATTTGCGATCTCTCTTCAAGTCATCGAGCATCGTTCTCCTCGAACGCGCGTTCGTGGCTCGAGAGATCACGCTTCTGAATCCGATTTGGATTCACTCTAAGAACACTGGTAAACCTTTTTACGCGATTCTTCACAGGGTTGATGTTGGAATTTTGATTGATTTAGAGCCAGCTCGAACCGAGGACCCGGCGCTTTCAATCGCCGGAGCAGTCCAATCGCAGAAACTTGCGGTCCGTGCTATTTCTCATTTACAATCGTTACCTGGAGGAGACATCAAGCTTCTATGTGACACTGTTGTTGACAGTGTTAGAGATCTTACTGGCTACGACCGCGTTATGGTGTACAAGTTTCATGAAGATGAACATGGTGAAGTCGTAGCGGAGAGTAAACGGGACGATTTAGAACCTTACATTGGTCTGCATTATCCGGCTACTGATATTCCTCAGGCATCTCGGTTCTTGTTCAAGCAGAACCGTGTTAGGATGATTGTAGATTGCTATGCGTCACCAGTTCGTGTGGTCCAAGACGATAGGCTCACGCAGTCTATATGCTTGGTGGGTTCGACTTTGCGAGCTCCTCATGGCTGTCATGCTCAATACATGACTAACATGGGCTCTATTGCGTCGTTAGCCATGGCAGTTATAATAAATGGAAACGAAGAAGATGGTAACGGTGGTGTTAATACTGGAGGAAGAAACTCGATGAGGCTTTGGGGTTTAGTCGTTTGCCATCACACATCGGCTCGTTGCATACCTTTTCCTTTGAGGTACGCTTGTGAGTTTCTTATGCAGGCCTTTGGCTTACAGCTAAACATGGAGTTGCAGTTAGCCTTGCAGGTGTCTGAAAAACGCGTTCTGAGAATGCAGACACTGTTATGCGATATGCTTCTGCGTGACTCACCCACGGGGATTGTCACGCAGAGGCCTAGTATCATGGATTTAGTAAAATGTAACGGTGCGGCATTTCTTTACCAAGGAAAGTACTATTCGTTGGGTGTGGCTCCGACTGAGGCTCAGATAAATGACATTGTGGAGTGGTTGCTTGCTAACCATTCTGATTCAACCGGGTTAAGCACAGATAGTTTAGGCGATGCGGGTTATCCTCGGGCAGCTGCTTTGGGAGATGCTGTGTGCGGTATGGCAGTCGCGTGTATCACAAAAAGGGACTTCCTTTTCTGGTTCCGGTCTCATACAGAGAAAGAAATCAAATGGGGAGGGGCTAAGCACCATCCTGAGGACAAAGATGATGGTCAGCGGATGCATCCGCGTTCTTCGTTCCAGGCTTTTCTCGAAGTTGTTAAGAGCCAATGTCAGCCATGGGAAACTGCTGAAATGGACGCCATTCACTCGCTCCAGCTTATTCTAAGAGATTCTTTCAAAGAGTCTGAAGCGATGGACTCTAAAGCTTCTGCACCTGGGGGGGTTCAGCCACATGGGGATGATATGGCAGAGCAAGGGATGCAGGAGATAGGTGCAGTTGCGAGAGAGATGATTAGGCTTATTGAGACTGCGACGGTTCCTATATTTGCTGTGGACATTGATGGCTGCATCAATGGGTGGAACGCCAAGATTGCAGAGCTGACCGGTCTTTCTGTTGAAGAAGCTATGGGAAAGTCTCTGGTTCGCGATTTGATTTACAAAGAGTACAAAGAAACAGCTGATAGGCTTCTTTCTTGTGCTCTCAAAGGTTTATGCAATTCTTTAAATTTTCAATCTGTGACACACTCTAACATGCAAATTCTGATAATGTGTTTCATTTTCAATTATGCAGGGGATGAAGGCAAGAATGTGGAGGTCAAGCTGAAAACTTTTGGTCCCGAGCTACAAGGGAAAGCAGTGTTTGTGGTTGTCAACGCATGCTCAAGCAAGGACTACTTAAACAACATCGTTGGAGTCTGCTTTGTTGGACAAGATGTAACCGGTCATAAATTTGTTATGGACAAGTTCATCAACATACAAGGCGATTACAAGGCCATCATCCATAGCCCGAACCCTCTGATCCCTCCAATCTTTGCAGCGGATGAGAATACGTGCTGCATTGAGTGGAACACCGCAATGGAAAAGCTCACAGGGTGGCCTCGCAGCGAAGTGATTGGAAAATTGCTTGTTAGGGAAGTATTTGGGAGCTGTTGCAGACTAAAGGGTCCTGATGCGTTAACGAAGTTCATGATCGTTTTACATAACGCGATTGGTGGCCAAGAAACGGATAAATTCCCATTCCCGTTCTTTGACCGTGAAGGGAAATTCATTCAGGCTCTCCTGACTTTGAACAAACGGGTCAGCGTCGACGGTAAAATCATTGGGGCTTTCTGTTTTTTGCAGATACCGAGTCCCGAGCTGCAGCAAGCTCTAGAAGTCCAGAGGAGGCAGGAGAGTGAATACTTCTCAAGGAGGAAAGAGTTGGCTTACATTTTCCAATTTATAAAGAATCCATTGAGCGGATTGCGTTTCACAAATTCATTGTTGGAAGCTACGAATTTAAACGAGGATCAGAAGCAGCTTCTTGAAACTAGTGTTTCATGCGAGAAGCAGATCTCGAAGATTGTAGGAGAAATGGACGTCAAAAGCATTGAAGACGGGTGAGAGTTTTGATTTGTTTTTATACACACTTAAATTGTTCTATAAAGCCTCATTAGCACTTCTAAACAAACAATCTCTGTTTTTTTTTGCTCATCAGTTCATTTCTGCTAGAGAGGACAGAGTTCTTCATTGGCAGTGTCATAAATGCAGTGGTAAGCCAAGTCATGTTTGTGGTGAGAGAGAGAAATATTCAGCTGATCCGTAACATTCCCGCGGAGATCAAATCCATGGCTGTCTATGGTGACCAGATAAGGCTCCAACAGGTTCTGGCAGAGTTTCTGCTAAGTATTGTCCGTTATGCGCCCTTGGAAGGCTCGGTAGAGCTCCATCTATGCCCGGTTCTGAAACAAATGGCTGACGGGTTCTCCGCTATACGCTTGGAGTTCAGGTACCTTCCATCGTTCTGGTTTTGTCTCTGTCTCTCCAATTCTCTATTTAGCTAGTTGACTTAGGTCTGAGATCAAAGAGAAGAACCATAGACTTAAGCAGCGAATATATCGCTATCGCTTCAATCATCTGCTTTATGATATTTCTTTTTTGTAAATGTGACTACTGCTGCAGATAAGTTTCATTTTTTTGTTTGCTATCTGCATTGAGAAAAACTTGTGAATGATAAAATAAACACAGTCTTGACTGGGAGCGTTGTCACCGTTCAAATTTCAAAGCCTTAAGGACAGCAAACTCGCTGACTCATTTTGTCAATGTTTTGTTAGAATGGCGTGTGCAGGGGAAGGTGTGCCGCCAGAGAAAGTGCAGGACATGTTCCATAGTAGCCGATGGACAAGTCCAGAAGGATTAGGGCTAAGCGTTTGCAGAAAGATTCTGAAACTGATGAACGGAAGGGTTCAGTACATAAGGGAATTCGAACGCTCTTATTTCCTAATCGTTATTGAACTCCCGGTTCCTCTGATGATGATGATGCCATCATAGTGAGTGGCAGAAAATGTTTT
CDS Sequence
- >scaffold_702875.1
ATGGTCTCCGGAAGCGGTAGCAAAACCAGCGGTGCAGAGGCAGCTTCGTCAGGCCATCGCGTCAATCGGAGCCGTCACACCAGCGCAGAACAAGCTCAGTCGTCAGCAAGCAAAGCCCAAAGGTCACAGAATCAGCAGCCGCAAAACCACGGCGCCGGAACAGAATCCACAAGCAAAGCAATTCAACAGTACACTGTCGACGCGAGACTTCACGCCGTCTTCGAACAATCCGGAGAGTCAGGTAAGTCGTTCGATTACTCGCAGTCTCTTAAAACGGCGCCGTACGATCCTTCCGTACCGGAGCAGCAGATCACAGCTTATCTCTCGCGAATCCAACGCGGTGGCTATACCCAGCCTTTTGGCTGCTTGATCGCCGTCGAAGAATCCACTTTCACAATCATCGGTTACAGTGAAAATGCGCGGGAAATGCTAGGGCTCATGTCTCAATCTGTACCAAGCATCAAGGAGATATCGGAGGTTCTTACGATTGGTACGGATTTGCGATCTCTCTTCAAGTCATCGAGCATCGTTCTCCTCGAACGCGCGTTCGTGGCTCGAGAGATCACGCTTCTGAATCCGATTTGGATTCACTCTAAGAACACTGGTAAACCTTTTTACGCGATTCTTCACAGGGTTGATGTTGGAATTTTGATTGATTTAGAGCCAGCTCGAACCGAGGACCCGGCGCTTTCAATCGCCGGAGCAGTCCAATCGCAGAAACTTGCGGTCCGTGCTATTTCTCATTTACAATCGTTACCTGGAGGAGACATCAAGCTTCTATGTGACACTGTTGTTGACAGTGTTAGAGATCTTACTGGCTACGACCGCGTTATGGTGTACAAGTTTCATGAAGATGAACATGGTGAAGTCGTAGCGGAGAGTAAACGGGACGATTTAGAACCTTACATTGGTCTGCATTATCCGGCTACTGATATTCCTCAGGCATCTCGGTTCTTGTTCAAGCAGAACCGTGTTAGGATGATTGTAGATTGCTATGCGTCACCAGTTCGTGTGGTCCAAGACGATAGGCTCACGCAGTCTATATGCTTGGTGGGTTCGACTTTGCGAGCTCCTCATGGCTGTCATGCTCAATACATGACTAACATGGGCTCTATTGCGTCGTTAGCCATGGCAGTTATAATAAATGGAAACGAAGAAGATGGTAACGGTGGTGTTAATACTGGAGGAAGAAACTCGATGAGGCTTTGGGGTTTAGTCGTTTGCCATCACACATCGGCTCGTTGCATACCTTTTCCTTTGAGGTACGCTTGTGAGTTTCTTATGCAGGCCTTTGGCTTACAGCTAAACATGGAGTTGCAGTTAGCCTTGCAGGTGTCTGAAAAACGCGTTCTGAGAATGCAGACACTGTTATGCGATATGCTTCTGCGTGACTCACCCACGGGGATTGTCACGCAGAGGCCTAGTATCATGGATTTAGTAAAATGTAACGGTGCGGCATTTCTTTACCAAGGAAAGTACTATTCGTTGGGTGTGGCTCCGACTGAGGCTCAGATAAATGACATTGTGGAGTGGTTGCTTGCTAACCATTCTGATTCAACCGGGTTAAGCACAGATAGTTTAGGCGATGCGGGTTATCCTCGGGCAGCTGCTTTGGGAGATGCTGTGTGCGGTATGGCAGTCGCGTGTATCACAAAAAGGGACTTCCTTTTCTGGTTCCGGTCTCATACAGAGAAAGAAATCAAATGGGGAGGGGCTAAGCACCATCCTGAGGACAAAGATGATGGTCAGCGGATGCATCCGCGTTCTTCGTTCCAGGCTTTTCTCGAAGTTGTTAAGAGCCAATGTCAGCCATGGGAAACTGCTGAAATGGACGCCATTCACTCGCTCCAGCTTATTCTAAGAGATTCTTTCAAAGAGTCTGAAGCGATGGACTCTAAAGCTTCTGCACCTGGGGGGGTTCAGCCACATGGGGATGATATGGCAGAGCAAGGGATGCAGGAGATAGGTGCAGTTGCGAGAGAGATGATTAGGCTTATTGAGACTGCGACGGTTCCTATATTTGCTGTGGACATTGATGGCTGCATCAATGGGTGGAACGCCAAGATTGCAGAGCTGACCGGTCTTTCTGTTGAAGAAGCTATGGGAAAGTCTCTGGTTCGCGATTTGATTTACAAAGAGTACAAAGAAACAGCTGATAGGCTTCTTTCTTGTGCTCTCAAAGGGGATGAAGGCAAGAATGTGGAGGTCAAGCTGAAAACTTTTGGTCCCGAGCTACAAGGGAAAGCAGTGTTTGTGGTTGTCAACGCATGCTCAAGCAAGGACTACTTAAACAACATCGTTGGAGTCTGCTTTGTTGGACAAGATGTAACCGGTCATAAATTTGTTATGGACAAGTTCATCAACATACAAGGCGATTACAAGGCCATCATCCATAGCCCGAACCCTCTGATCCCTCCAATCTTTGCAGCGGATGAGAATACGTGCTGCATTGAGTGGAACACCGCAATGGAAAAGCTCACAGGGTGGCCTCGCAGCGAAGTGATTGGAAAATTGCTTGTTAGGGAAGTATTTGGGAGCTGTTGCAGACTAAAGGGTCCTGATGCGTTAACGAAGTTCATGATCGTTTTACATAACGCGATTGGTGGCCAAGAAACGGATAAATTCCCATTCCCGTTCTTTGACCGTGAAGGGAAATTCATTCAGGCTCTCCTGACTTTGAACAAACGGGTCAGCGTCGACGGTAAAATCATTGGGGCTTTCTGTTTTTTGCAGATACCGAGTCCCGAGCTGCAGCAAGCTCTAGAAGTCCAGAGGAGGCAGGAGAGTGAATACTTCTCAAGGAGGAAAGAGTTGGCTTACATTTTCCAATTTATAAAGAATCCATTGAGCGGATTGCGTTTCACAAATTCATTGTTGGAAGCTACGAATTTAAACGAGGATCAGAAGCAGCTTCTTGAAACTAGTGTTTCATGCGAGAAGCAGATCTCGAAGATTGTAGGAGAAATGGACGTCAAAAGCATTGAAGACGGTTCATTTCTGCTAGAGAGGACAGAGTTCTTCATTGGCAGTGTCATAAATGCAGTGGTAAGCCAAGTCATGTTTGTGGTGAGAGAGAGAAATATTCAGCTGATCCGTAACATTCCCGCGGAGATCAAATCCATGGCTGTCTATGGTGACCAGATAAGGCTCCAACAGGTTCTGGCAGAGTTTCTGCTAAGTATTGTCCGTTATGCGCCCTTGGAAGGCTCGGTAGAGCTCCATCTATGCCCGGTTCTGAAACAAATGGCTGACGGGTTCTCCGCTATACGCTTGGAGTTCAGAATGGCGTGTGCAGGGGAAGGTGTGCCGCCAGAGAAAGTGCAGGACATGTTCCATAGTAGCCGATGGACAAGTCCAGAAGGATTAGGGCTAAGCGTTTGCAGAAAGATTCTGAAACTGATGAACGGAAGGGTTCAGTACATAAGGGAATTCGAACGCTCTTATTTCCTAATCGTTATTGAACTCCCGGTTCCTCTGATGATGATGATGCCATCATAG
Protein Sequence
- >scaffold_702875.1
MVSGSGSKTSGAEAASSGHRVNRSRHTSAEQAQSSASKAQRSQNQQPQNHGAGTESTSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDPSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIKEISEVLTIGTDLRSLFKSSSIVLLERAFVAREITLLNPIWIHSKNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDSVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPTGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSQCQPWETAEMDAIHSLQLILRDSFKESEAMDSKASAPGGVQPHGDDMAEQGMQEIGAVAREMIRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEEAMGKSLVRDLIYKEYKETADRLLSCALKGDEGKNVEVKLKTFGPELQGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTGHKFVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCIEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVLHNAIGGQETDKFPFPFFDREGKFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQFIKNPLSGLRFTNSLLEATNLNEDQKQLLETSVSCEKQISKIVGEMDVKSIEDGSFLLERTEFFIGSVINAVVSQVMFVVRERNIQLIRNIPAEIKSMAVYGDQIRLQQVLAEFLLSIVRYAPLEGSVELHLCPVLKQMADGFSAIRLEFRMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGRVQYIREFERSYFLIVIELPVPLMMMMPS