Information report for scaffold_700307.1
Gene Details
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Functional Annotation
- Protein of unknown function that contains DUF1399 domain and putative RNA binding motif. Expressed in many plant tissues and is involved in many aspects of plant growth and development as well as response to salt stress. Regulates ovule development via the auxin pathway.
Homologous
- Brassica napus: BnaA08G0189400ZS, BnaA03G0566500ZS, BnaC03G0684700ZS, BnaC07G0541200ZS, BnaC06G0027700ZS
- Brassica oleracea: Bo7g118810, Bo3g153130
- Brassica rapa: Bra010619, Bra017861, Bra018718
- Glycine max: Glyma.02G217400
- Nicotiana attenuata: A4A49_40142
- Solanum lycopersicum: Solyc02g063450.3, Solyc02g091650.3
- Solanum tuberosum: PGSC0003DMG400030615
Gene Resources
- Pfam: PF07173
- UniProt: D7MA18
- RefSeq: XP_002868973.1
- EMBL: GL348719
- AlphaFoldDB: D7MA18
- InterPro: IPR004139 , IPR004254 , IPR009836 , IPR029044
- PANTHER: PTHR34365 , PTHR34365:SF7
- Gene3D: 3.90.550.10
- eggNOG: KOG0748 , KOG1413 , KOG2198
- STRING: 81972.D7MA18
- HOGENOM: CLU_772424_0_0_1
Sequences
gDNA Sequence
- >scaffold_700307.1
TCTTTCAATATCTCTCCACTTAAGATACACAAAGCCCAGCTCTATAGTGCGTGAACGCACCAACAACCATCAGAACATGAAACAACTGATGGCTATGTCCAGCTATATCGAATTTCCCCTGCAATAATACATTTTTCATACAGAAAGCAGAAGTCATATGCAGCGAGCATAGGCCAATTTAATAGAAGTAAAAAAGAAACAGAACAACTATGATAATGGGAACTCATATGATATACAGCATAATCCCAGTAAGTGGATATTTGTTAAGAAAAATCTTAGAAGCGTCAAACTATAGTCATCAGGATATGCCTTTGGCCACTTTGGTGATAAGTCATCCCAAGTCGATCCCTTCAGCATTCACCCAAGGCCAGGTTGGAAATAAATCTGATCGTAAAACACATCTGCAGATTATTTTAGTTAGCATGTGCTAGACATAATGAGATTTTGAAAGAACAAGCAAGAGAGGAAGCGAGGTAAACAAGTAGAAGAAGAATCTTACAGGGATCATGACATCCTGTACAAACTGCTTCTGCCCATTATCATTCCATGATGAAGCTGCCATAATGGTTCTAACACATGGTTGCACCATAAAAGAATGAGAAACACTATTAAAACATTTGTATGCTCCGTAGAAACTTATACTATAATAGTCTAGCTTCAGTAGGTAACATACTTATCCCTAAGCCTCAAAGTAATCAAAGAAGTATGGAGCAATTTCCATATCATCTTTTAAAGAGACAGACAACCTCTCTTAAGCAATACTCCACAAGGTACAGACAGCCCCTCTTAAACAATACAACAGCAATGTACAATGAGGGAGAAAGGTGAAAAAGCGTCACCTTCTAGTATAGTCACTCGGCCAAATTTGTGTTTGTAGAACAACTGGTCTAGTGCCTACTTATAGTAACCTGTATTAAAAAGTGTTTCAGTAATTGAGCTGGAGGGACGCAGAGAAAGGAAAAACCAGTCCTTACGTGCAATCTTGTAGTACGCAATCAGTTCGCCAGGCCTTTCAGTGATCACTGGTTCAAAATCCAAGTGCTAAAAATTTGAAAAAGAGCCTTCATCCTCACTTATCTACATGACAAAATTACTTGAACATTAAGGAGAAAAATCACACTAGATTAAAATTACCTGCATATATGTTAGTTGATTATAACTCAATGCCTTGCTCTTGACGGCTTGATCAGATCCATCCTGTCAGAAAATTTGTCGTTCGTGAAGACCATGGTTAGTAATTCATAGAATATCAAACTGAGTAAGAGACCACCACCCTGCAATTGTACAAAATTAAGTACCTGAGATATAAACAGAGGATGTTTTGAGGCAACGGGACTTTGATATCTGTAAAAAAAGAATTAGCCATTAGACAGTTCAATAAAGATTTGCTGTAAGAATTATCTGTAAAAGTAAAGAATTAGTCTAGTATCTCACGTTAAAACTGATTTAACTGTCCTTTCAAGATAGTCTGTACGACTGCGGGCCATAATCACTACAGCAGCCAAGGGCATCTGCTAAATAAAAACTAGAAACAGGTTATATATATATAGCAAGTGATAGCAGTGCAGCAAATACAAATACAAAGAAGCGCATCTTCTTATCCAGACCTGTCCAGCTTCAATTAGTTTTGCTATTCCTTTTTCTGGGAGAACAAAATAAGTATTCCTACCAAAACTAATAAAAAGAAAGCAATAAAATTAGCTTTACAGGTGATAGCAATGGACTTTCAAACGTCTGGATAAGATCCTTTAGCTGCAAAAGTTCTTGGAGGCAAAGATGTAATGTTTCCCAGAATGTAATCCAAGACCTTACCAATCATCTTAGTCAAATCATTGCAGTAAGAGTGAGCATGAAGCTGATGTGTGTGCCAGATAAGATCAATATCGTAAGTCGGAACACAGAAAAGTTTAATCGACCTTTCTCGGTTACCTTTGATCAAGTAGAGAAATGCTTTGTATCTAGCCACAGCTTCTTGCAGAAAGACATCATTATCTACATGAGCTCTTGAAACCTGCAACAAAGACACGCAAACAAAGTCGAATATTACAAAACCTTGCAACAAAGTGGTTTGGGACAAGAAGCTGACCATGATTTTACCTGGTAGTAAAATGGGCTTTGTCTCTTGACAGTTGAAACAAGATCGTAAGTGGTACATTTCTCAAGAGCTGAGATATTTGCTGGCTCTGAGATTGCCTTGTCCAAAATAAAGGTCATACGGCTCCATAGGATACAATCTTTTCCATAGAGTATCGGTTTGTGATATGCAGTTTCCATTTACGGAAGATAAAACACCAGAATTGTCGAGAACTCTCCCATAGAATTGCTCACAATTAGTCTTGTACCTCACCTGAAACGATTAACAACATTTTGAACTTTGTATACAATCCAACAAAGAAAAATTTAACGGGATTGAAATATTGATATAGATTTACCGGATCAAGCCTGTGGCAATGCCAAACCCATTCAGAGTCAAGAGGAGGGACTAATCAAAGAAGACTCGGTGTATTGAGCAAGCAAGGGAAGCCAGTAAGCATTGTATCTGTAAAACAAAATCATCCAAATGTGAGAGTATTGAAACACGAACGCTAACTTAGATTCGTAAATTGAGTATATAGAGAATGAATTGGTGATTAAACCTGTAGATGGCTCTTTGGAGTGCAGGGCCATCGTAGAGACAACAGTTGCGATCAACAGCTCCGTGGAACTGGAGGTGTTTCTTGGCTGCAGCAAAGAGGTCAACGCGATGGGTTTTTGAGGATTAATCTCAGATGCTACGGACAAGGTTCTCTTGGTGTTGCAGCTGGGGAAATGTTGACCTTCGTTGTTAGCGACCATCAAGTTGGTGGTACATGTTCTTTTCGTTTGGGGAATAAGAAGGTTAGATCTTTTAATCAACATCATTTGCCACCACCTGATTCAAC
CDS Sequence
- >scaffold_700307.1
ATGATGTTGATTAAAAGATCTAACCTTCTTATTCCCCAAACGAAAAGAACATGTACCACCAACTTGATGGTCGCTAACAACGAAGGTCAACATTTCCCCAGCTGCAACACCAAGAGAACCTTGTCCGTAGCATCTGAGATTAATCCTCAAAAACCCATCGCGTTGACCTCTTTGCTGCAGCCAAGAAACACCTCCAGTTCCACGGAGCTGTTGATCGCAACTGTTGTCTCTACGATGGCCCTGCACTCCAAAGAGCCATCTACAGTCCCTCCTCTTGACTCTGAATGGGTTTGGCATTGCCACAGGCTTGATCCGGCAATCTCAGAGCCAGCAAATATCTCAGCTCTTGAGAAATGTACCACTTACGATCTTGTTTCAACTGTCAAGAGACAAAGCCCATTTTACTACCAGGTTTCAAGAGCTCATGTAGATAATGATGTCTTTCTGCAAGAAGCTGTGGCTAGATACAAAGCATTTCTCTACTTGATCAAAGGTAACCGAGAAAGGTCGATTAAACTTTTCTGTGTTCCGACTTACGATATTGATCTTATCTGGCACACACATCAGCTTCATGCTCACTCTTACTGCAATGATTTGACTAAGATGATTGGTAAGGTCTTGGATTACATTCTGGGAAACATTACATCTTTGCCTCCAAGAACTTTTGCACAGATGCCCTTGGCTGCTGTAGTGATTATGGCCCGCAGTCGTACAGACTATCTTGAAAGGACAGTTAAATCAGTTTTAACATATCAAAGTCCCGTTGCCTCAAAACATCCTCTGTTTATATCTCAGGATGGATCTGATCAAGCCGTCAAGAGCAAGGCATTGAGTTATAATCAACTAACATATATGCAGCACTTGGATTTTGAACCAGTGATCACTGAAAGGCCTGGCGAACTGATTGCGTACTACAAGATTGCACCTTCATCATGGAATGATAATGGGCAGAAGCAGTTTGTACAGGATGTCATGATCCCTGGGAAATTCGATATAGCTGGACATAGCCATCAGTTGTTTCATGTTCTGATGGTTGTTGGTGCGTTCACGCACTATAGAGCTGGGCTTTGTGTATCTTAA
Protein Sequence
- >scaffold_700307.1
MMLIKRSNLLIPQTKRTCTTNLMVANNEGQHFPSCNTKRTLSVASEINPQKPIALTSLLQPRNTSSSTELLIATVVSTMALHSKEPSTVPPLDSEWVWHCHRLDPAISEPANISALEKCTTYDLVSTVKRQSPFYYQVSRAHVDNDVFLQEAVARYKAFLYLIKGNRERSIKLFCVPTYDIDLIWHTHQLHAHSYCNDLTKMIGKVLDYILGNITSLPPRTFAQMPLAAVVIMARSRTDYLERTVKSVLTYQSPVASKHPLFISQDGSDQAVKSKALSYNQLTYMQHLDFEPVITERPGELIAYYKIAPSSWNDNGQKQFVQDVMIPGKFDIAGHSHQLFHVLMVVGAFTHYRAGLCVS