Information report for scaffold_500333.1
Gene Details
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Functional Annotation
- Encodes a nuclear localized member of the MYB family of transcriptional regulators that is involved in negative regulation of flowering. It is expressed in vascular tissues and at low levels in the shoot apex during the transition to flowering. Loss of function mutations are early flowering.EFM is involved in the autonomous, thermosensory and GA pathways and expression is directly regulated by SVP. EFM interacts with JMJD5 to repress FT expression.
Homologous
- Arabidopsis thaliana: AT2G03500.1
- Brassica napus: GSBRNA2T00002968001, BnaA06G0396500ZS, GSBRNA2T00115286001, BnaC07G0284400ZS, BnaA02G0327900ZS, BnaC02G0442300ZS
- Brassica oleracea: XP_013594032.1, Bo7g081380, XP_013618499.1, Bo2g137000
- Brassica rapa: XP_009152171.1, Bra025115, XP_009129087.1, Bra026548
- Raphanus raphanistrum: RrC12528_p1, RrC5786_p1
Gene Resources
- Pfam: PF00249
- UniProt: D7LQI3
- EMBL: GL348717
- AlphaFoldDB: D7LQI3
- KEGG: aly:9311275
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017930 , IPR044787
- PANTHER: PTHR31003 , PTHR31003:SF19
- SUPFAM: SSF46689
- PROSITE: PS51294
- Gene3D: 1.10.10.60
- OrthoDB: D7LQI3
- eggNOG: ENOG502QU6F
- STRING: 81972.D7LQI3
- HOGENOM: CLU_036551_0_1_1
Sequences
gDNA Sequence
- >scaffold_500333.1
ATATAAGCTATATATATCAATATATGGCTTCTTCATCAGAACTAAGCTTGGATTGCAAGCCACAAAGCTACTCTATGCTTTTGAAATCATTTGGTGATAACTTTCAGAGCGATCCAACTACACAAAAGCTCGAAGATCTTCTCTCTCGCCTAGAACAAGAACGTCTCAAGATCGATGCCTTCAAACGCGAGCTTCCCCTTTGCATGCAACTCCTTAACAATGGTACACATATCCATTTACAAATATTTAGACAAATATTTAGATATACATCAATATATACTTGTAAGTATAATATCTTAAAAAATCCCTTTATTACCAAAAAAAAAAACCTAGAGAACCATTAGTTATTAATATTATACGTATAGAAGAGTTCTTGAATTTCTTTTTACTTTTTTTGAAAAGATCTTTATTCATTATTTCAAGAGTTTATTTCATAAAAATCAGAGCTTGCTTTTGATTTCTTTGAATCACAAAACTTTTGTTTCCTCCCAACACTGAAATCAACAAAACTAACTAAAGTGATTTTAAAGGTTATAAGGTTCATGTTATATACATCTCTTACTTTCATATGTTAAATTACTTTACCATCTTTAGTTTTTTTTTTTTCCAGCTGTGGAAGTTTACAAACGACAACTAGAAGCATATAGAGCAAATAGTGATAACAATAACCAAAGTGTTGCCACAAGACCAGTTCTTGAAGAGTTCATACCCTTAAGGAACCAACCCGAAAAAACAAACAAAGGAAGTAACTGGATGACGACTGCTCAGCTTTGGAGCCAATCCGAAACCAAACCAAAAAACATTGATTCAACTACTGATCAATCTCTTCCCAAAGACGAGATTATTAGTAGTCCCAAACTCGGACATTTTGATGCAAAACAAAGAAATGGCAGCGGTGCTTTTCTTCCCTTCTCTAAGGAACAATCTTTGCCTGAATTAGCTCTATCTACGGAGGTCAAGAGGGTGTCTCCGACCAATGAGCATACTAATGGCCAAGACGGTAATGATGAGAGCATGATCAACAATGATAATAACAATAATAATAATAATAATAATAACAATTCAAACAGCAATGGAGTTTCTTCTACAACAAGTCAAAGTAATAGAAAGGCACGACGTTGCTGGTCGCCGGACTTGCACCGGAGATTTGTCCAAGCTCTTCAAATGCTTGGTGGTTCGCAAGGTACAAATACACTTATTCTAATCAACTAATTATTAATTTGTTGTAGCTTTACCATGGTTAATCTCACAAAATTGTCAACTAATTAGAAAGATTTTTTTCTAGTATACATGATATTTGATTCGCCAAATATATCATTATTGTATACTGTATATTTATACATATCTTGTTTTATAATTTAGAGTCTTATAACTGAATCCAAGTATCAGTTTGGGTTTTATTCGATTGTTTTTATTTTTGTTAAAAGGCCTTCTTTTTATTTGATTGTTAGGTGTGAAAATGAATATGGTATGGCAAATTGCCATGATTTCGATTTTGCTAAGGTTCATCTCTTAATTAATCATATATTATTATTATTATTTTTTCAAAGGCATATAAAGTTTTTAGTTGGAGTTTTCTTCTAGTTTTTTTCGGTTGATAAAAAAATAGTACCTAAAGTGAAATTGAATATACTATAGATCAACCTGGTTTAAACAAGAATATGAGAGATCAACTTGACCATCGTTTAGATATATAGTTAGTTTTCAAATAATTTTTTTTTTTTTTGGTTTTGATTTGGATTTAGCTTATATATATAATATAAAATAACCTTGTTAACCTGATTAAAAAATGGTTTAATTTTTTTGAATCGAACCTATTTCATATATATATACGGAACTAAATGCCCGTATTTATATGTTTGTTATATTTTGCAGTGGCTACACCGAAACAAATAAGGGAACTTATGAAAGTTGATGGCCTGACCAATGATGAAGTCAAAAGCCATCTCCAGGTAACTTAAATCACAAGCCACCACAATATGCTTACAACTTTTTTTAACTCATAGTTAAGTACTTTACTAATGGTGTATTAATTTTAAACAAACAGAAATATCGGCTTCACACTAGAAGACCAAGCCCAAACCCACAAACATCAGGTGGGCCAGGTCCACATTTGGTGGTCCTAGGTGGCATATGGGTTCCACCAGAGTACACCACCACACATGGTGGAACTCCGACTCTCTACCACCACCAAGTCCACCACCACCACACCACCACGGCAGGGCCGCCTCCACCACACTTTTGCTCCTCGCAAGAATTCTACACAACCCCACCGCCTACGCAGCCGCTCCACCACCACCACTTTCAAACCTTTAACGGCTCATCCGGTGGCGCCGCCTCCACCGATTCAACTCATCATCAGTTAACGGACAGCGCCACCGAAGAAGGAAAGTCGTCGGAGAGTGGTGGCGGAGAGAGAAAAGGGTTGGCTGCTCTTAGGGATGAAGGTGAAGATCAGAGCAATATTAATGGAAGTGAAATAACTCTCAAATTCTAAAAAAAAAGATTCTTGATTAA
CDS Sequence
- >scaffold_500333.1
ATGGCTTCTTCATCAGAACTAAGCTTGGATTGCAAGCCACAAAGCTACTCTATGCTTTTGAAATCATTTGGTGATAACTTTCAGAGCGATCCAACTACACAAAAGCTCGAAGATCTTCTCTCTCGCCTAGAACAAGAACGTCTCAAGATCGATGCCTTCAAACGCGAGCTTCCCCTTTGCATGCAACTCCTTAACAATGCTGTGGAAGTTTACAAACGACAACTAGAAGCATATAGAGCAAATAGTGATAACAATAACCAAAGTGTTGCCACAAGACCAGTTCTTGAAGAGTTCATACCCTTAAGGAACCAACCCGAAAAAACAAACAAAGGAAGTAACTGGATGACGACTGCTCAGCTTTGGAGCCAATCCGAAACCAAACCAAAAAACATTGATTCAACTACTGATCAATCTCTTCCCAAAGACGAGATTATTAGTAGTCCCAAACTCGGACATTTTGATGCAAAACAAAGAAATGGCAGCGGTGCTTTTCTTCCCTTCTCTAAGGAACAATCTTTGCCTGAATTAGCTCTATCTACGGAGGTCAAGAGGGTGTCTCCGACCAATGAGCATACTAATGGCCAAGACGGTAATGATGAGAGCATGATCAACAATGATAATAACAATAATAATAATAATAATAATAACAATTCAAACAGCAATGGAGTTTCTTCTACAACAAGTCAAAGTAATAGAAAGGCACGACGTTGCTGGTCGCCGGACTTGCACCGGAGATTTGTCCAAGCTCTTCAAATGCTTGGTGGTTCGCAAGTGGCTACACCGAAACAAATAAGGGAACTTATGAAAGTTGATGGCCTGACCAATGATGAAGTCAAAAGCCATCTCCAGAAATATCGGCTTCACACTAGAAGACCAAGCCCAAACCCACAAACATCAGGTGGGCCAGGTCCACATTTGGTGGTCCTAGGTGGCATATGGGTTCCACCAGAGTACACCACCACACATGGTGGAACTCCGACTCTCTACCACCACCAAGTCCACCACCACCACACCACCACGGCAGGGCCGCCTCCACCACACTTTTGCTCCTCGCAAGAATTCTACACAACCCCACCGCCTACGCAGCCGCTCCACCACCACCACTTTCAAACCTTTAACGGCTCATCCGGTGGCGCCGCCTCCACCGATTCAACTCATCATCAGTTAACGGACAGCGCCACCGAAGAAGGAAAGTCGTCGGAGAGTGGTGGCGGAGAGAGAAAAGGGTTGGCTGCTCTTAGGGATGAAGGTGAAGATCAGAGCAATATTAATGGAAGTGAAATAACTCTCAAATTCTAA
Protein Sequence
- >scaffold_500333.1
MASSSELSLDCKPQSYSMLLKSFGDNFQSDPTTQKLEDLLSRLEQERLKIDAFKRELPLCMQLLNNAVEVYKRQLEAYRANSDNNNQSVATRPVLEEFIPLRNQPEKTNKGSNWMTTAQLWSQSETKPKNIDSTTDQSLPKDEIISSPKLGHFDAKQRNGSGAFLPFSKEQSLPELALSTEVKRVSPTNEHTNGQDGNDESMINNDNNNNNNNNNNNSNSNGVSSTTSQSNRKARRCWSPDLHRRFVQALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPNPQTSGGPGPHLVVLGGIWVPPEYTTTHGGTPTLYHHQVHHHHTTTAGPPPPHFCSSQEFYTTPPPTQPLHHHHFQTFNGSSGGAASTDSTHHQLTDSATEEGKSSESGGGERKGLAALRDEGEDQSNINGSEITLKF