Information report for scaffold_403512.1
Gene Details
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Functional Annotation
- Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.;Suppressor of Overexpression of Constans 1;Encodes a MADS‐box protein
Homologous
- Arabidopsis thaliana: AT2G45660.1
- Brassica napus: BnaA03G0221300ZS, GSBRNA2T00011646001, BnaC03G0260300ZS, GSBRNA2T00029970001
- Brassica oleracea: XP_013631375.1, XP_013631374.1, Bo4g024850, XP_013630326.1, Bo3g038880, XP_013630325.1
- Brassica rapa: XP_009133737.1, XP_009133736.1, XP_009133735.1, Bra000393, XP_009133734.1
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: D7LD70
- EMBL: GL348716
- AlphaFoldDB: D7LD70
- KEGG: aly:9316258
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- OrthoDB: D7LD70
- CDD: cd00265
- eggNOG: KOG0014
- STRING: 81972.D7LD70
- HOGENOM: CLU_053053_0_4_1
Sequences
gDNA Sequence
- >scaffold_403512.1
CAGTTTTTATTTGTTGAGTGAATCACTTTCTTGAAGAACAAGGTAGCCCAATGAACAATTGCGTCTCTACTTCAGAACTTGGGCTACTCTCTTCATCACCTCTTCCAGTACTTTCTTGATTCTTACTCGACCAAATCACGATTTCATGAGATCCCCACTGCATTCAAATATAATCATTACACAAAATTAATAGATGCAAAGAAGATAGAACAATACATAAAAGGTCATGATGATTGAAGCTAACCAGGAAAAACTAGTAAGGAGTCTCATAACCTAATAACCCCCAAAAAGAACCCAACTTTCTTATCTTAACCGAATAGAAAAAAAGAATAACTTGAGACCCATAAGAATATATTATACCTTTTCAGAGAGCTTCTCGTTTTCTGCAGCTAGAGCTTTCTCCTGCAAAAGTTTTAGATTCCAATTGTAAGAGCAAGCACAAGAGGATTATTTACTTGGAATTTTCCACAATTTACATACATACATATATATATACACACTCATAGAACCTACTTTACCTTTTGCTTGAGCTGCTCAATTTGTTCCTTAAACACTTGAGTCTAATAGAGATGAGAAATTGAGTTAGAAATTATGAGTGGTTTTAGAAGATGATTCGAAGAATAATTATAATGTGGGGATGTAGATAAATATATACCTTTCTTGCTCGAATACATTTGACACTTTTCTCAAGCTGATGCTCAATCTGTTGCAGCTCCTCGATTGAGCATGTTCCTATGCCTTCTCCCAAGAGTTTACTGATAACAAAAACAAAACACTTTAGGATCAAACCTTAATCCGTGATATATATACACAAGCGAGTATAATGTGTTTATATGTATATATCACAAACCGTTTAGCAGCTTCGAGTTGCTCAATTTTCTTCATCATGTTTGCTGCTTCATATTTCAAATGCTGTTGGTTATATCACAAAAATGTTATTGCATGTACGTAAATATCCCTCACAAAAATGTTATTGCATGTACGTAAATATCCCTAATAAATATGTAACTTGATCCTGTGACCTTGAGATTGTGTACATATCGTGGTTATTCCGTAACCCTCTTTGATAGTATTATATTAAGTATTAATAGGCAAGATCATAAAGAATCAACCTGCATATTTTCTTCAGAAACCGGTTTGGTGCTGACTCGATCCTTAGTATGCCTCAGATAACGATCTATGGTATCTTGCATACTGTCAAAAACATTGGAATATGAAACTAAATCATCAGAGATTAAATTTACCTAATTGTGTTCTCAAAACATCAAAAACATTTCTTATTGAAGTAATCACAAGATCACTTACTTAAGGACATAACTTGAAAAGTATCTTGTACTTTTTTTTTTCTTTTCTTCCCATTTTAGAAATCAAAAACATGTGAGGTCTTATCTTTATATTAATTAGTAGGTTCGAGAGAAAGATGTACTTTCTCAAATGGACCAAATGTCTGAAACATCTGATCAAAAGCTGGCTTTTTCCATTTACAGAAGTAATGATTCATGAAAAATAAGTTTGGTTTCCCTTCTACCTAACAGTACAAGTCTACAAGATAAAACTCTTTATTATTCTCAAAAACAATCAACATTGAGTTTCTATGTCAAAATCAGGAACAAATATTCAAACAAATTGCACTAAATTAGGAATGATCATAAAATGAAGCACGAGAGATTAATAAATCAGGAATGATCATAAAATGAAGCACGAGTGATTAATAAATCAGGAATGATGAAACAACTTCATAGCCATCACAAACATGTTTTGCTTAAACCAATAACAAGACAAGCTAATTCAACCAGATCGTGTGTCATCTCAAACCAAAAGAATACTAATTGAAACAATTAAATTAAGTTGTACATATGTGTGATCATGATCTCTAATAAGATCTAAGACCATCAGCAGTGGTAAATGTGTTTGTGTGGGTGTAAGTATTTTTTTAGTATTATAATATCAGGGCATCTCCAATGATGCTCTATATCTTGCTCTAAACTCTATATTTAGAGCAAAATCACTCCAATGGTGGGTGTGAAGAGAGAGACAATTTTTTCGTTTTTTTAATACCTACACCCCAAGACTCACACCCACCTGCTTGTGCCACTGCTGAAGCTCTAAGAAGATCAAATATCTAACAAATGTAAATTTGCTTACCAGAGAGCACATTTTATTTATATCATAACTTCAGAAACTAATTGAGAAAGAGAGAGACAGATGATTAACCAAGCTGATGTACTAGCGGGAAAAAAAACAAATAAGAGTATATGTACTTGATACTACTTTAATAATAGCCCTAATTTTGCAGAAACCAAGAAACTCATTAATTTAACCCACCTCTCAAAGCAACCGTCAAAGAGATGTGATTCCACAAAAAGCCAATCAATTAATCCATATATAAACCAAGAGATATAAAAATTAAGATAAAAAAAGAGAGGCTAATGAGAGATATCTCTCTCTTTCTCTGGATGATTTATAAGAAGAAACAAAAGAAGGAAACATACTTGGAGCTGGCGAATTCATAAAGTTTGCCTTTGGGAGAGAAGATGATAAGAGAAACTTCAGCATCACAAAGCACTGAGAGCTCAAAGGCTTTCTTCAACAGACCATTCCTTCGTTTAGAGAAAGTCACTTGTCTGCTTGTTGCATTCTCTATTCTCTTCATCTGAGTTTTGCCCCTCACCATCTTCTTGTTTAATTAATTTC
CDS Sequence
- >scaffold_403512.1
ATGGTGAGGGGCAAAACTCAGATGAAGAGAATAGAGAATGCAACAAGCAGACAAGTGACTTTCTCTAAACGAAGGAATGGTCTGTTGAAGAAAGCCTTTGAGCTCTCAGTGCTTTGTGATGCTGAAGTTTCTCTTATCATCTTCTCTCCCAAAGGCAAACTTTATGAATTCGCCAGCTCCAATATGCAAGATACCATAGATCGTTATCTGAGGCATACTAAGGATCGAGTCAGCACCAAACCGGTTTCTGAAGAAAATATGCAGCATTTGAAATATGAAGCAGCAAACATGATGAAGAAAATTGAGCAACTCGAAGCTGCTAAACGTAAACTCTTGGGAGAAGGCATAGGAACATGCTCAATCGAGGAGCTGCAACAGATTGAGCATCAGCTTGAGAAAAGTGTCAAATGTATTCGAGCAAGAAAGACTCAAGTGTTTAAGGAACAAATTGAGCAGCTCAAGCAAAAGGAGAAAGCTCTAGCTGCAGAAAACGAGAAGCTCTCTGAAAAGTGGGGATCTCATGAAATCGTGATTTGGTCGAGTAAGAATCAAGAAAGTACTGGAAGAGGTGATGAAGAGAGTAGCCCAAGTTCTGAAGTAGAGACGCAATTGTTCATTGGGCTACCTTGTTCTTCAAGAAAGTGA
Protein Sequence
- >scaffold_403512.1
MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEAAKRKLLGEGIGTCSIEELQQIEHQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGSHEIVIWSSKNQESTGRGDEESSPSSEVETQLFIGLPCSSRK