Information report for scaffold_403069.1
Gene Details
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Functional Annotation
- Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b. SPL activity nonautonomously inhibits initiation of new leaves at the shoot apical meristem.
Homologous
- Arabidopsis thaliana: AT2G42200
- Brassica napus: BnaA04G0269100ZS, BnaC04G0586600ZS, BnaA05G0029400ZS, BnaC04G0031900ZS, BnaC06G0209700ZS, BnaA07G0201200ZS
- Brassica oleracea: Bo4g191350, Bo4g015800, Bo6g073290
- Brassica rapa: Bra016891, Bra004674, Bra003305
- Vitis vinifera: VvSBP8, VIT_08s0007g06270
Gene Resources
- Pfam: PF03110
- UniProt: D7LI29
- EMBL: GL348716
- AlphaFoldDB: D7LI29
- KEGG: aly:9316039
- InterPro: IPR004333 , IPR036893 , IPR044817
- PANTHER: PTHR31251 , PTHR31251:SF140
- SUPFAM: SSF103612
- PROSITE: PS51141
- Gene3D: 4.10.1100.10
- OrthoDB: D7LI29
- eggNOG: ENOG502QPVZ
- STRING: 81972.D7LI29
- HOGENOM: CLU_057950_1_0_1
Sequences
gDNA Sequence
- >scaffold_403069.1
TGAGTAAGAGGAAACCAAAATGGAGATGGGTTCCAACTCGGGTCCGGGTCATGGTCCGGGTCAGGCAGAGTCTGGTGGTTCCTCCACTGAGTCATCCTCTTTCAGTGGAGGGCTCATGTTTGGCCAGAAGATCTACTTCGAGGACGGTGGTGGTGGATCCGGGTCTTCTTCCTCTGGTGGTTCAAACAGACGTGTCCGTGGAGGCGGGTCGGGTCAGTCGGGTCAGATACCAAGGTGCCAAGTGGAAGGCTGTGGAATGGATCTAACCAATGCAAAAGGTTATTACTCGAGGCACAGAGTTTGTGGAGTGCACTCTAAAACACCTAAAGTCATTGTCGCTGGTATCGAACAGAGGTTTTGTCAACAGTGCAGCAGGTTCTTTTATTCTTCCCAGTTCTACCCTTTAGTTCTATTGTTTATTTACATGTTTTGCCATTGCCGGAGATATTCGAGTCCGGCCAAGGCTTTCCTTGTTCCACTGTTGTGAATCAAATCTAAAGGCTTTAGCTTTTTGTGATTGTCAGTGTCGTATGCTTTTTTGGCTTTAACGTCTTTTTATTTTCATTTTAAAAACTTTACAGCTTAGTTTTGTAACCTGGTCTTATGTTTGTTGGACTCGTTGGGCTTATTTTTGGGAACATGTTTACGTGTACTTGTAGATGCTTCTCTTTTATTTATTTTTGATTTTGTCTTTCTAAAAATCTATAATCCAAGGAGATATGAAATGAATGGACAAGAAGAAAGCCATTGCCCTCATTATCTTTGCTTCTTTAGGTCATATCATTATTGAGGGGGACAAAAAAAGTGTACCATAGCATCATTGACGTGATCATTGAGGAACTCTGCTACATCACAAGTGTGTGGTTTTAGATTCTAATTCAAAACTGATGACGAAAGCTTATAATGAGTTATAGAATGTATAGAAACGGTGGTTAACTTGGAGAGGTCCTATGTTTGGAATGTTCTGTTATGTTGCTTTTCTTTGAAGTTAACTCAATCTGAATGAATCACATAGGTTTCATCAGCTTCCGGAGTTTGACCTAGAGAAAAGAAGTTGCCGTAGGAGACTCGCTGGTCACAATGAGCGACGGAGGAAGCCACAGCCTGCCTCTCTCTCTGTGTTATCTTCTCGTTACGGGAGGATCGCACCATCACTTTACGGTTAGATCCTAAAGCTCGACATATTATAAGACCGATTTGTGTGCTTAATTTATCCTTAAAAGATAGATGTTTATATGCTTATAACAGGAAATGCTGATGCTGGAATGAATGGAAGCTTTCTTGGGAACCAAGAGATGGGATGGCCAAGTTCAAGAACGTTGGATACAAGAGTGATGAGACGGCCTGTGTCATCACCGTCGTGGCAGATCAATCCAATGAATGTATTTAGTCAAGGTTCAGTTAATGGAGGAGGGACAAGCTTCTCATCTCCAGAGATTATGGACACTAAACTAGAGAGCTACAAGGGAATTGGCGACTCAAATTGTGCCCTCTCTCTTCTGTCAAATCCACATCAACCACAGGACAACAACAACACATGGCGAGCTTCTTCAGGTTTTGGCCCCATGACGGTTACAATGGCTCAGCCACCACCTGCACCTGGCCAGCATCAGTATCTGAACCCGCCTTGGGTATTCAAGGACGATGACAATGATATGTCTCCTGTTTTGAATTTGGGTCCGTACACCGAGCCAGATAATTGCCAAATAAGCAGTGGCACAACAATGGGTGAGTTCGAGTTATCAGACCACCATCATCAAAGTAGGAGACAGTACATGGAAGATGAGAACACAAGGGCTTATGACTCTTCTTCTCACCATACCAACTGGTCTCTCTGAGAGAATCTTCTTACAATGAACG
CDS Sequence
- >scaffold_403069.1
ATGGAGATGGGTTCCAACTCGGGTCCGGGTCATGGTCCGGGTCAGGCAGAGTCTGGTGGTTCCTCCACTGAGTCATCCTCTTTCAGTGGAGGGCTCATGTTTGGCCAGAAGATCTACTTCGAGGACGGTGGTGGTGGATCCGGGTCTTCTTCCTCTGGTGGTTCAAACAGACGTGTCCGTGGAGGCGGGTCGGGTCAGTCGGGTCAGATACCAAGGTGCCAAGTGGAAGGCTGTGGAATGGATCTAACCAATGCAAAAGGTTATTACTCGAGGCACAGAGTTTGTGGAGTGCACTCTAAAACACCTAAAGTCATTGTCGCTGGTATCGAACAGAGGTTTTGTCAACAGTGCAGCAGGTTTCATCAGCTTCCGGAGTTTGACCTAGAGAAAAGAAGTTGCCGTAGGAGACTCGCTGGTCACAATGAGCGACGGAGGAAGCCACAGCCTGCCTCTCTCTCTGTGTTATCTTCTCGTTACGGGAGGATCGCACCATCACTTTACGGAAATGCTGATGCTGGAATGAATGGAAGCTTTCTTGGGAACCAAGAGATGGGATGGCCAAGTTCAAGAACGTTGGATACAAGAGTGATGAGACGGCCTGTGTCATCACCGTCGTGGCAGATCAATCCAATGAATGTATTTAGTCAAGGTTCAGTTAATGGAGGAGGGACAAGCTTCTCATCTCCAGAGATTATGGACACTAAACTAGAGAGCTACAAGGGAATTGGCGACTCAAATTGTGCCCTCTCTCTTCTGTCAAATCCACATCAACCACAGGACAACAACAACACATGGCGAGCTTCTTCAGGTTTTGGCCCCATGACGGTTACAATGGCTCAGCCACCACCTGCACCTGGCCAGCATCAGTATCTGAACCCGCCTTGGGTATTCAAGGACGATGACAATGATATGTCTCCTGTTTTGAATTTGGGTCCGTACACCGAGCCAGATAATTGCCAAATAAGCAGTGGCACAACAATGGGTGAGTTCGAGTTATCAGACCACCATCATCAAAGTAGGAGACAGTACATGGAAGATGAGAACACAAGGGCTTATGACTCTTCTTCTCACCATACCAACTGGTCTCTCTGA
Protein Sequence
- >scaffold_403069.1
MEMGSNSGPGHGPGQAESGGSSTESSSFSGGLMFGQKIYFEDGGGGSGSSSSGGSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVIVAGIEQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERRRKPQPASLSVLSSRYGRIAPSLYGNADAGMNGSFLGNQEMGWPSSRTLDTRVMRRPVSSPSWQINPMNVFSQGSVNGGGTSFSSPEIMDTKLESYKGIGDSNCALSLLSNPHQPQDNNNTWRASSGFGPMTVTMAQPPPAPGQHQYLNPPWVFKDDDNDMSPVLNLGPYTEPDNCQISSGTTMGEFELSDHHHQSRRQYMEDENTRAYDSSSHHTNWSL