Information report for scaffold_401936.1
Gene Details
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Functional Annotation
- Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Interacts with BSH, AtSWI3A, SWI3C and FCA. Expressed ubiquitously.
Homologous
- Actinidia chinensis: CEY00_Acc04452
- Brassica napus: BnaA04G0216300ZS, BnaC04G0527400ZS
- Brassica oleracea: Bo4g182070
- Brassica rapa: Bra021864
- Glycine max: Glyma.04G014400
- Gossypium hirsutum: Gohir.D05G180900, Gohir.A05G177500
- Juglans regia: Jr11_18050
- Manihot esculenta: MANES_18G001900
- Prunus avium: Pav_sc0000454.1_g170.1.mk
- Prunus persica: PRUPE_5G005400
- Vitis vinifera: VIT_18s0122g00670
Gene Resources
- Pfam: PF00249 PF04433 PF16495
- UniProt: D7LGC1
- EMBL: GL348716
- AlphaFoldDB: D7LGC1
- KEGG: aly:9315527
- InterPro: IPR001005 , IPR007526 , IPR009057 , IPR017884 , IPR017930 , IPR032451 , IPR036388
- PANTHER: PTHR12802 , PTHR12802:SF44
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS50934 , PS51293 , PS51294
- Gene3D: 1.10.10.10 , 1.10.10.60
- OrthoDB: D7LGC1
- CDD: cd00167
- eggNOG: KOG1279
- STRING: 81972.D7LGC1
- HOGENOM: CLU_004447_5_0_1
Sequences
gDNA Sequence
- >scaffold_401936.1
TTAGTTGAACAGAGAGAGTCATGGCCATGAAAGCTCCCGATTCCGGCGGATCTGGGGAAATTCTTCCAAATACTCCCTCTCTTTCCGAAACTACGTCTGGAGTTGCCGCAGCTTTGCAGTCGCCTCAACCGCCGTCTTCTTCTTCCGATATCGATACTATCTACGTACCTAGCTACTCCCGTAAGTCTGCAAACGCCGAGAAACCTTCTCTTTTATTCTAGTTTCTTCTCTGTTTCTTCTGGATTTTGTATTTGTATAATCGATTTGACCAATTAGGTTGGTTTTCGTGGACGGGCATCAACGATTGCGAGGTCCGTTCACTGCCGGAATTTTTCGATTCGAGATCTTCATCCAAAAACCCTAAGTTTTACCTCTACTTGAGGAATTCGATTATTAAGCAGTACAGAGACGACCATCCTCGGAAGATTAGCTTCACTGACGTTCGGAGAACTCTCGTCAGTGATGTTGTCTCTATTCGTCGCGTATTTGATTTCCTAGACTCATGGGGGCTTATCAACTATACTAGCTCCGCCTCTGCTAAGCCGCTCAAGTGGGACGAAAAAGAGGCCGGAAAATCCGTCGGAGATGCTGCTTCTGAGCCATCCACTACTGTCAAAGAAACTGCCAAGAGAATCTGCAATGGCTGCAAATCAATTTGCAGCATAGCTTGTTTCGCCTGTGATAAGGTTTGATTTCCTAATTTGTGGGCATAGTAATAGTTTCGTTCTCTGAGTTTGTCACTTAGAATGATGGCACTTGGAGTATGGTAATATCAAAGCCTACACTTATGAAATTATGTACATTTTTCTTTTCAGTATGACTTGACATTGTGTGCGAGGTGCTATGTCCGTAGTAACTATCGAGTTGGTATTAACTCCTCGGAGTTTAAGCGAGTTGAGATTAGTGAGGAGTCAAAGATACAGTGGTCTGAAAAGGAAATTCTGCTTCTGCTGGAAGCTGTTATGCACTATGGAGATGATTGGAAGAAGGTTGCACCGCATGTTACTGGTAGAACCGAGAAGGATTGTGTTTCTCAGTTTGTCAAGCTTCCGTTTGGGGAACAGTTTGTAAAAGAGTCTGACTTTGAGGATGGTTTAGAGGCGTTTGATCAGATCAAGGGCTCTGCTATTCCTGAATCTGAAGGAATAGATAAAGACTGTTCTTCTCCCAATAAGCGGATGAAATTAACGCCTCTTGCGGATGCAAGCAACCCAATAATGGCTCAGGTTTGAAAGACACTACAATTTGAGTAGTTGCGTTCATTCTCTATGTTAATCTTATTTGTTGCGTTGTTAGGCTACTGAAGAATAGTCCAGTGTCTGCACTAGGCTATTCCATGACTTGTGTAAATGTCTTCTTAAAGACCCTAAAGCTAGAATACCTTGTGGGGTTCCTTTTGAACTCTAGTAATATCAAATTGTAGTTGACATATAAAAAGGCATTTAGGAATCAAATATGTATTAGATAATTTTGTACTGTGTTACTTGTATCACATCTCAATTGTTATGCTTCATTGGCCGTCTCTGAATGATATTTCTCCTATCATGTCCTCTACAGGCTGCTTTTCTTTCAGCTTTGGCTGGCACAAATGTTGCAGAAGCAGCAGCTCGAGCGGCAGTGACAGCTTTATCTGATGTAGACTACGACGCTGACAAAAATGCCAGCGGAGACTCAAATCGACAAGGTATCAAAGACCTAGTCACCTAGCTGTCTCTATTTGCAGTCCATTTCTGTCCCAAGCCAAACCCTATGGTGACATTTTTGTTTTTTCTGATACAGAGGCCAATGGTGCTTCGAGTGGTGAAACCACTAGAAACGACTCTGAAAGAGCTTGGGCAGATGCGAAGTCTCTGATCGAGAAGGAAGAGCAGGAGGTAGAAGTAGCAATCAAAGAGACTGTTGAAGTTGAGGTTAGTAACAATCTGCAACTTCCCATAGACTTTTGATTATATTGTTATTCTCAATTTTGATTGATGTTGGAACAAACAAAATTGGGCTTAACAGATGAAGAAGATCCGAGATAGGATTGTACATTTCGAGAAATTGGATTTGGAAATGGAGAGAAGCCGGAAACAATTGGAGGAGATGAAGAATCTGCTTTTCGTTGATCAATTAAACATTTTCTTCCACACAAGAAAAGCCCGGACATCTGAAGATAGAGTAGAGTGTTAGAACACACTTAAATTTGAAACT
CDS Sequence
- >scaffold_401936.1
ATGGCCATGAAAGCTCCCGATTCCGGCGGATCTGGGGAAATTCTTCCAAATACTCCCTCTCTTTCCGAAACTACGTCTGGAGTTGCCGCAGCTTTGCAGTCGCCTCAACCGCCGTCTTCTTCTTCCGATATCGATACTATCTACGTACCTAGCTACTCCCGTTGGTTTTCGTGGACGGGCATCAACGATTGCGAGGTCCGTTCACTGCCGGAATTTTTCGATTCGAGATCTTCATCCAAAAACCCTAAGTTTTACCTCTACTTGAGGAATTCGATTATTAAGCAGTACAGAGACGACCATCCTCGGAAGATTAGCTTCACTGACGTTCGGAGAACTCTCGTCAGTGATGTTGTCTCTATTCGTCGCGTATTTGATTTCCTAGACTCATGGGGGCTTATCAACTATACTAGCTCCGCCTCTGCTAAGCCGCTCAAGTGGGACGAAAAAGAGGCCGGAAAATCCGTCGGAGATGCTGCTTCTGAGCCATCCACTACTGTCAAAGAAACTGCCAAGAGAATCTGCAATGGCTGCAAATCAATTTGCAGCATAGCTTGTTTCGCCTGTGATAAGTATGACTTGACATTGTGTGCGAGGTGCTATGTCCGTAGTAACTATCGAGTTGGTATTAACTCCTCGGAGTTTAAGCGAGTTGAGATTAGTGAGGAGTCAAAGATACAGTGGTCTGAAAAGGAAATTCTGCTTCTGCTGGAAGCTGTTATGCACTATGGAGATGATTGGAAGAAGGTTGCACCGCATGTTACTGGTAGAACCGAGAAGGATTGTGTTTCTCAGTTTGTCAAGCTTCCGTTTGGGGAACAGTTTGTAAAAGAGTCTGACTTTGAGGATGGTTTAGAGGCGTTTGATCAGATCAAGGGCTCTGCTATTCCTGAATCTGAAGGAATAGATAAAGACTGTTCTTCTCCCAATAAGCGGATGAAATTAACGCCTCTTGCGGATGCAAGCAACCCAATAATGGCTCAGGCTGCTTTTCTTTCAGCTTTGGCTGGCACAAATGTTGCAGAAGCAGCAGCTCGAGCGGCAGTGACAGCTTTATCTGATGTAGACTACGACGCTGACAAAAATGCCAGCGGAGACTCAAATCGACAAGAGGCCAATGGTGCTTCGAGTGGTGAAACCACTAGAAACGACTCTGAAAGAGCTTGGGCAGATGCGAAGTCTCTGATCGAGAAGGAAGAGCAGGAGGTAGAAGTAGCAATCAAAGAGACTGTTGAAGTTGAGATGAAGAAGATCCGAGATAGGATTGTACATTTCGAGAAATTGGATTTGGAAATGGAGAGAAGCCGGAAACAATTGGAGGAGATGAAGAATCTGCTTTTCGTTGATCAATTAAACATTTTCTTCCACACAAGAAAAGCCCGGACATCTGAAGATAGAGTAGAGTGTTAG
Protein Sequence
- >scaffold_401936.1
MAMKAPDSGGSGEILPNTPSLSETTSGVAAALQSPQPPSSSSDIDTIYVPSYSRWFSWTGINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKISFTDVRRTLVSDVVSIRRVFDFLDSWGLINYTSSASAKPLKWDEKEAGKSVGDAASEPSTTVKETAKRICNGCKSICSIACFACDKYDLTLCARCYVRSNYRVGINSSEFKRVEISEESKIQWSEKEILLLLEAVMHYGDDWKKVAPHVTGRTEKDCVSQFVKLPFGEQFVKESDFEDGLEAFDQIKGSAIPESEGIDKDCSSPNKRMKLTPLADASNPIMAQAAFLSALAGTNVAEAAARAAVTALSDVDYDADKNASGDSNRQEANGASSGETTRNDSERAWADAKSLIEKEEQEVEVAIKETVEVEMKKIRDRIVHFEKLDLEMERSRKQLEEMKNLLFVDQLNIFFHTRKARTSEDRVEC