Information report for scaffold_202986.1
Gene Details
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Functional Annotation
- ecotype Kl-0 chromomethylase (CMT1). A plant line expressing an RNAi construct directed against DMT4 has reduced agrobacterium-mediated tumor formation.
Homologous
- Brassica napus: BnaA06G0073800ZS
- Brassica oleracea: Bo5g014720
- Brassica rapa: Bra019857
- Glycine max: Glyma.01G160300
- Gossypium hirsutum: Gohir.D01G174400
- Medicago truncatula: Medtr7g007090
- Oryza sativa: LOC_Os03g12570, OsCMT3b
- Vitis vinifera: VIT_08s0007g06800
Gene Resources
- Pfam: PF01426 PF00385 PF00145
- UniProt: D7KX24
- RefSeq: XP_002889276.1
- EMBL: GL348714
- AlphaFoldDB: D7KX24
- InterPro: IPR001025 , IPR001525 , IPR029063 , IPR043151 , IPR050390
- PANTHER: PTHR10629 , PTHR10629:SF42
- SUPFAM: SSF53335
- PROSITE: PS51038 , PS51679
- Gene3D: 2.30.30.490 , 3.40.50.150 , 3.90.120.10
- CDD: cd04716
- eggNOG: ENOG502QW29
- STRING: 81972.D7KX24
- HOGENOM: CLU_004921_0_0_1
Sequences
gDNA Sequence
- >scaffold_202986.1
CAAGCGACGCTCTGGCGTTTCATCCATTGTTCTCCTTATGATAGCATTGTAGTCTCGACGGGAGCCACGGCTTTTGAAGGCAATGTAAGATTGCATTCTCCGCCTTGGCCCACTTCTTCGACTCCACATCTTCTCTGGTTTGTACAATTATCTTTCTCAGCTCAAATGGTTGTGCCCACTGCAGTTTTTCCTGCAAGACAAACACCAAGAGATCATTAACCTACACGAGTTCCCCATCTTAACTTGTTGTTTTTAAGTCAAGTCCTTTTGCCTCACCAGGAAACGTCCACAAGTGGTAAAGAATGCAAGTTCCGCATACCCATTTCTTGTATTCTTCCACCTCTGATTCTTTCATCTGCAAATCGCACGTCAACAACAACATATCACATCTTTGTGACCATTTTAAGATTTAAAAGGGAGGGAGCTCACCTCGTAGTATTGCAGATTATCACTGGCAGTTAATGCATCCTCAGGCACCCAATCGGGCATGTCACCTTTGAAGAAATCATCCACGGAAAGTTTGTCAAATGCCGCACATAGGTCGCCTTCCACCTCCTCTGAGATCGTACATGCATGGCCAACAATAAAGATGGAAAATATTAGACACAGAAACCAAAAAAATATATAGACACACAAACCAAAAAAAATATTCGACACACAACAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATAGAAGTTGGTTTGAGCACCAAAATTACAATTTACCTGGAGTTTGCGGGGGCTTAAACCTGCAGAGCGTTGCAATCATAGTCGAGCAACGTTTCTTCTCAACCTCATTATACTGAACCCTTGCTTCGAAGTCGCGAGTGGAATTGAGTATCATGGAAGCAACTATTCCGGTATCCTTGGACACATTCCCAAGTGCAGACAAAAATTCAAAGTTTGTCCCCTACAAGATCAAAATAAGACGAAGTTCACTTAAAAGCACTACAACTTATAGAAACCAATAATATAGTAGACAGTCAAGAGAAGCAAAATCTCAAGTGCAAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGACTAATTTACCTTGTGCAGATTGTAGCAATAGAGTTGGTCAAAGGAAATAGGGCAAGCCTGTTTCAGAGTCCAGCCGATATATGACCATGTCTATGAGTCCGTCATCCGTACGCCTGACGGGCCCATTGAATCGATCACACGTGAAGACAGACATTCTTGGAAAATCTCACCCAACCCTAAATTCTGATAAAAGCATTAGATTCAATTGAAATCTTAATACCCAAACCCTATGTTTTTTTGAACATCTATGAGGATCAAATTTTCACCATGCTTGAGGATAAAATCAAATCATATATTAACAGACAGAACCCTAAACCCTAATTTCTCGGAATCATAACATATTCGTCCTCCATGTATCAATGAGTTTATTAGGGTGAAGAAGAACACAACGATATTTATGAATCCAAAAACTTTCTCACTTTCTGACCACGATTAATTAGATTCAATAAATTATAACATCTCCTAAACAACAAATTTATGTTGAGAATGGTTCACCTTTTTTTTTTTCCTTGAATCGTTCGAGCAAATTCGAAAACCTTTTTAAGTGAGGGAATCGAAGCACAAGCGAAGATTAAGAAAGAGGGAATTTGCTCCGTTATGAGATATCAAATTTGGGCCCAATATAAAACCTAAACGCCCAGGTGGCGATAATTTGCGTGGACCAAATTTTCACCATTTAATAGTCGAAGCTGGTAGCAATGGCCTAAAACACGATTTCAGAATTTTGCTACTAGACTAGTTACGGTCCGTGTCAGACTTGAACAAAATCTTACACTAAAAGCCCAATATATATGGGCTTGTGGGCTAAACTGCCTTTATTATCTCCTAAATGAGTCGAAAAAAAAAAAATATATATATCTCCTGAATGAATGATTACATTATTAAAGCTTTTTTTTTTTTTTTTGCCAAAACTAACAATAAAAAGGAAAGATAAGAGTAACTATCAAATCCAGAGAAGCATGAGATCATTATTAAAGCTTGTAAGTGGTGATCATATACCAGAGAGTCTCGGTCGGTGGTAACTGAATTACGCAAAATCGAACCAATGTTTGTCGTCAAGTTCTGAAGAGAGATCTTGGACGTGCCTAACTCCTGGGATGCTTAATAACAGGTTTTGTTTTTCTAAATTCTAACTAAGCATCTGTCTTTTTTTGGTATTAATTCTTTTTTAAGCAACTCTAATTCGAAGCTTCTAGTAAGTTGTCTTGTCTGGAATCAACGGAGGGTTTCAGTCTAATCACAAGAATTTAAAATCTTTAGATCAAAGATCATAAGAAATAGAATTGTTTCCAAACGAAGATAAGGTCAACATAAACTAAGAAGTAGAAACAACGATCAAGAGCTAACAGTTAAAGCCATTGTTTGAGCATATAGCTCTTGCTGACCCAAAAAGAAATAAAAGAACATTAAGCAGTCTAGAAAATGGAGTACGATTCCTAAAGATAGAGAGCTTCATGATGAGGCCTTGATGGAGACCGTCAATCAGATTGATCCTCCGGCTTTGCCTGCATGCATTCAGGGTACTTGAAGGGCAGCTTGATTACAGGCTCATCATCCGTCAGTCCTTGACTCGCCATACCAAATGCATATCCTAACGCAACCCCTACAGGAACTGCCACTGCATTCCCAACCTGGATGTACCTACAAAATTTAATTCAAACCTTAGTTTTTTCATATTAGGATCTCCAGTGCTAAACAACAATCACATGACATACATAGCTAGAGGAGCAGCAAGAACCAAGGACTTACTTTTCCTTAATTGAGCCACAAAGCTTGTAACAATCAGGGAACCCTTGTAGTCTGGCATTCTCACGGACAGACAACACACGCTCTTGCATTGGATGGATTACGCACTGCACCAACCAGTTTTAATAAACCTGTCACTAGAGAATGCAAACTGGAACGTACTCACACACATGGGAAATGAAAGCAAAAGGGCTTACCTGGTTGTGAGGTTCTGCCCTTGTCACAACCGTGTTAACTATTTCGTCCCACCACAATCTACCAAAAGGCCTGACATTCAGATAACAGATGTGTTACTTTCAGTGCATTTAACATTCTTAGGTTATGGAAAGAGGTTCCACAAGAAGCATATTAGTTAGAGAAAGTCACTTTTTTGATTTTCCTTTTATGAATGAAACTGCATAAGCAGGGACCTGTGAAAACCAAAAGACATGTCATATAGAAGCTGCAAAAAAAAAAAACTAGAACACAAAAATGACAAGGTGGCGCGTGGTTTAATGTTTACCACATTCTTTCCAGATTTTAACTTTGCTCGCTTCACCCTAAGGTTAAGTTGCGCTTTGTTGTTGTGAACTAAAACACCAGGCATATCACGAAAATTTGCCCCCTGTAGCAATAAGAATTCAACAACATGAACAAGAAATGATTATACATTGAATGCTTGAAACAAGCACTAAAAATTGTCGCACCTTCTTTTTTGGTATGTAGGAAATTCTTTCCAAGTCGTCATCTCTTAATTCAAGAGGCTGATGATCAAACAACCTGCGCGCCGGATCTCCACCACATACGGGTAATAGTGTCTCTGAAACAAGGAAGATTCGTTAATATTGGATTAAAGGTACCTACCAAATTTATCGAGTTTAAAATGCTCACCAGATCTTTTAAGGCTAATAAAGTTCTCAAAATCTGTCTTAGGAGCAGCATCATTATAATTCCTTACATCATTTGCCTCAGAATTTGTCACCTACAGCATTAATAGAGCACTGATCAATGAACTAGATAGATATAATGTAACATAATCATCAACGGCAGTTCTGAAGTTTAGATACACACAGGTGGTAGGTCACTAATAGCATCAGCCAGCGTAAGAGCGTTGTCTAATTGAAGAAGCTCCTTTTGAATAAGTCCAACTTGTAAATCCTGCATTTACAACAGATGAATAAGCAATGAAATTATAAGTGTCTTTTAAATTTAAATGTACAACCGTCCACACTTGCCTCAAATTCCTTTGGTGTGTTGAATTTTTTCTCAACTTCATGTGTTGGAAGTGGGTAAGGGGGGAGTTTCTGTCAAACAAGTTAAGAGAGAGCAATAAAGATCATGTCCTCTAAGACAATATATTAGTGGTAAATATTATGTAACATATATTTACCTCTGTTGGTTGTGCGGCCCATAAAAAAACCCTGTTTCTAACCTGAGGGAGACCGTAGGATCCAGCCGTCATCATGCCCAACCGCGTCTGGTAATTCATGGCAACAAAGCTAGCCACAGCATGACGTGCCAGGTAACCCTTTGAAAACCTAAGAAGGTCTACAACATTTTCCATAAGCACGTAACTTGGCTTGAGGAAGTCAATGATGTCTAAAAACACCAAAAGTTGCTGGTTTTTCTTATCCTCAAGCGGTGCTTGTTTGTTTCTAAACCGGTTATAGCCACTGATCCCTTGGCAGGGTGGCCCACCGCACACAGAGTAAACAGTACCCTGAAATAGTAATAAACAAATATTGAAGAGACCAAAGTAATTATAAGCTAGGCACTATCATCAAACATGTAGTTAAGATCGTAAAAAGCTTGATAAACTCAACGGGAAGTGGTAAAAGATGAGACTTGAACCCATCTGTCACATACTCCTTGAGCTTCTCCTTACAATTGCTGGAAGAAAAATAAAGTAATTAATATAAATATTAATAAAACGTCAATACAAAACTAGGGCTGGAAAAGTTACCCTAAGCCAGAGTAAGGTTCCCATGTATCATACTTAGGACTGTATCCCTTCCACCTTACCTGAAAGTAATGAAATAAAAATAAAACTAATGTTTGAATTATCTCTTACGAAAGGATAAAATTTGTTTGTAACTAATTGAGAATTCTGATTTATAGTTCAGGAAACAATACCTTAAGATGAAGTGTCTTTTCCCCTGTGCCTTTAGGATCTCCAAAAACGATGCCAACAAACTTTTCTACTTCAAACTCTCCCGCTGAGAGTTCCATACCAGTACTTGCCTCATCTATGTCATCATTTTCGTCACTTTCTTCATCTTCCAACTCAGAAATTGATTCCATTGGTTCAGTGCTTGAACTGAGAGAAAACCTTTCACAGAGCCTTTTCCATTCTTTGAGGAGAATTAGAAAATCTTCTGCGGCTTCATTTCTCACCTGCGCAATGTTCAAAATAAAATAATTACATGAGTAGAAATCGTATCTTTGCTCCTAAGACGCTTTATAAAAATCACCAATAAAGACTTACCTCTGTTTCAGGATGATTATGTCTAAAACTATCACAAGCAAACTTATTTATATCCACAGACCATTTCTGCGAAATCAGAAAGACTCTTGGTCAGATACAGTAAAATGGTAAGTGAGTATTCATAACAAAATTCATAATAAGATTTACCGTAATCAATTTTACTCCTGCTATGGAAGCTCCCATGCAGAAACCTGTGGACATCGCTCCGCATCCACTGTACAGATCCAATAAATATTTTTCATCTTTGTGGAGAGTTTCAAAGCAATTCGAGGCGGAATCACTTGAAAGAGTTGATGACGCAGCAGTATCTGTTGGGATTGTTTGGCATAACAAAAATCATTAGTTTTCTCCAAAACACTATGAAGAAGGTTAATAAGAATATGAACGATAAAATTGCAAAAACCAGAGCTTGTTTTAAGTATTTTTTAGAAATGACCAACTAAGATATGATAGTGCTCATGTCAATAACAGTAAAAAGTCTCGGATGGTGCTAGAAACTAAATAGCATGGACATTACAATTAGTAAGAAGCTAATTAAAACCGCAACCAGAAGGAATAAAATTTCAAGTACAATCATTTGCACTTTAAACGACCAGCTCATATAAGATAATACTGATACAACAAAACAGTAATAAGTTTAGGATGTGGCTACAAACTGATTAACATGGACAATGCAGTTAAAAGGAAGCAAATTAAAACCGAAACCATAAGGAATAAAAATTCAATTACCATCATCTGCACTTGTAAAATTCAGATATGGCACTTCGTACTTCATATCATAGTAATAGTCACATGGAGGAATAACCCTTTGCTCGATTCTGGAGGTAATCTGTTGTAAAAAGTGTTAATTAGTATAGATAAATAAATTCATAAGAAGCCAAATCACCAAACTTTTCATACACTGCGCCAATTGAAATTAGAGTATTTGATACCTTTGGTAATGGGACTTTAGCGATGTTGACTTTCGAATAAATGCAGGTGAGAGGATTATCGTCCTCAACATTTGATAGAAACACCCTCTTTTTTTGCACAAGTTCGGCAAATCTTTCGATCAACTATAGAATACAAAGAACACAAATGAGATACATAAATTAGTACTAAGGGATCTAGTAAACTCAAACGCAGTAACAACTCACAGTATCATTGGGTCTGTAAAACCATCGAATCCGAGAGTAAGGCACCCCATCATCTGCTTCGAACATTTCAATAACTTTTCCAATAAAATTCAGCTTCCCTGGTAGACCCTGCATGGTAATTACATAAGGATCAGTGGTTGACAACAAAATTTTCAACAATGATTAACAAAAACCATGGAAATTGTACCAACCTAACATCTCAACAAAACAGAAAAACTGTAGCAACATAGAATCTAAACAGAGATTGACAAAAACCATGGCATAAATGAAGGAATTTCAGGAAGCTAAATGTACCGTGACGTAGACATCGTCATTGAGGTTGATGAGAACTCCATCAACCAAAGCTTGCTCGTAGTGACGTTTCGCTAGCTTTATCTTTTCCTTTTTGTCACTGTAAATCAAAACAACGAAAGGTCATGACACCCAACATAAGACAAAGCAACAAAATCATAGAAGAAGCGAACATAGAATCGAATTTCAACAGAGAAAACAAACAAAAAACCCTAAATTTTTACCCCTTCGTCGCCGTCGCAGCTTCAAGCTTTGTTTTCTTGGATGGGTAGCGATGAGGCCATCGAATCATCGACTCGACAACAGACACTGGTTTCCCAGCAAAACACAGATCTGACTCTGGCTCAGCGCGTTTCATCTGTTTGTTTTTCACTGCCATTTTCGCGTAATCGGAGAAAGCT
CDS Sequence
- >scaffold_202986.1
ATGGCAGTGAAAAACAAACAGATGAAACGCGCTGAGCCAGAGTCAGATCTGTGTTTTGCTGGGAAACCAGTGTCTGTTGTCGAGTCGATGATTCGATGGCCTCATCGCTACCCATCCAAGAAAACAAAGCTTGAAGCTGCGACGGCGACGAAGGGTGACAAAAAGGAAAAGATAAAGCTAGCGAAACGTCACTACGAGCAAGCTTTGGTTGATGGAGTTCTCATCAACCTCAATGACGATGTCTACGTCACGGGTCTACCAGGGAAGCTGAATTTTATTGGAAAAGTTATTGAAATGTTCGAAGCAGATGATGGGGTGCCTTACTCTCGGATTCGATGGTTTTACAGACCCAATGATACTTTGATCGAAAGATTTGCCGAACTTGTGCAAAAAAAGAGGGTGTTTCTATCAAATGTTGAGGACGATAATCCTCTCACCTGCATTTATTCGAAAGTCAACATCGCTAAAGTCCCATTACCAAAGATTACCTCCAGAATCGAGCAAAGGGTTATTCCTCCATGTGACTATTACTATGATATGAAGTACGAAGTGCCATATCTGAATTTTACAAGTGCAGATGATGATACTGCTGCGTCATCAACTCTTTCAAGTGATTCCGCCTCGAATTGCTTTGAAACTCTCCACAAAGATGAAAAATATTTATTGGATCTGTACAGTGGATGCGGAGCGATGTCCACAGGTTTCTGCATGGGAGCTTCCATAGCAGGAGTAAAATTGATTACGAAATGGTCTGTGGATATAAATAAGTTTGCTTGTGATAGTTTTAGACATAATCATCCTGAAACAGAGGTGAGAAATGAAGCCGCAGAAGATTTTCTAATTCTCCTCAAAGAATGGAAAAGGCTCTGTGAAAGGTTTTCTCTCAGTTCAAGCACTGAACCAATGGAATCAATTTCTGAGTTGGAAGATGAAGAAAGTGACGAAAATGATGACATAGATGAGGCAAGTACTGGTATGGAACTCTCAGCGGGAGAGTTTGAAGTAGAAAAGTTTGTTGGCATCGTTTTTGGAGATCCTAAAGGCACAGGGGAAAAGACACTTCATCTTAAGGGTACTGTTTACTCTGTGTGCGGTGGGCCACCCTGCCAAGGGATCAGTGGCTATAACCGGTTTAGAAACAAACAAGCACCGCTTGAGGATAAGAAAAACCAGCAACTTTTGGTGTTTTTAGACATCATTGACTTCCTCAAGCCAAGTTACGTGCTTATGGAAAATGTTGTAGACCTTCTTAGGTTTTCAAAGGGTTACCTGGCACGTCATGCTGTGGCTAGCTTTGTTGCCATGAATTACCAGACGCGGTTGGGCATGATGACGGCTGGATCCTACGGTCTCCCTCAGGTTAGAAACAGGGTTTTTTTATGGGCCGCACAACCAACAGAGGATTTACAAGTTGGACTTATTCAAAAGGAGCTTCTTCAATTAGACAACGCTCTTACGCTGGCTGATGCTATTAGTGACCTACCACCTGTGACAAATTCTGAGGCAAATGATGTAAGGAATTATAATGATGCTGCTCCTAAGACAGATTTTGAGAACTTTATTAGCCTTAAAAGATCTGAGACACTATTACCCGTATGTGGTGGAGATCCGGCGCGCAGGTTGTTTGATCATCAGCCTCTTGAATTAAGAGATGACGACTTGGAAAGAATTTCCTACATACCAAAAAAGAAGGGGGCAAATTTTCGTGATATGCCTGGTGTTTTAGTTCACAACAACAAAGCGCAACTTAACCTTAGGGTGAAGCGAGCAAAGTTAAAATCTGGAAAGAATGTGGTCCCTGCTTATGCAGTTTCATTCATAAAAGGAAAATCAAAAAAGCCTTTTGGTAGATTGTGGTGGGACGAAATAGTTAACACGGTTGTGACAAGGGCAGAACCTCACAACCAGTGCGTAATCCATCCAATGCAAGAGCGTGTGTTGTCTGTCCGTGAGAATGCCAGACTACAAGGGTTCCCTGATTGTTACAAGCTTTGTGGCTCAATTAAGGAAAAGTACATCCAGGTTGGGAATGCAGTGGCAGTTCCTGTAGGGGTTGCGTTAGGATATGCATTTGGTATGGCGAGTCAAGGACTGACGGATGATGAGCCTGTAATCAAGCTGCCCTTCAAGTACCCTGAATGCATGCAGGGGACAAACTTTGAATTTTTGTCTGCACTTGGGAATGTGTCCAAGGATACCGGAATAGTTGCTTCCATGATACTCAATTCCACTCGCGACTTCGAAGCAAGGGTTCAGTATAATGAGGTTGAGAAGAAACGTTGCTCGACTATGATTGCAACGCTCTGCAGGTTTAAGCCCCCGCAAACTCCAGAGGAGGTGGAAGGCGACCTATGTGCGGCATTTGACAAACTTTCCGTGGATGATTTCTTCAAAGGTGACATGCCCGATTGGGTGCCTGAGGATGCATTAACTGCCAGTGATAATCTGCAATACTACGAGGAAAAACTGCAGTGGGCACAACCATTTGAGCTGAGAAAGATAATTGTACAAACCAGAGAAGATGTGGAGTCGAAGAAGTGGGCCAAGGCGGAGAATGCAATCTTACATTGCCTTCAAAAGCCGTGGCTCCCGTCGAGACTACAATGCTATCATAAGGAGAACAATGGATGA
Protein Sequence
- >scaffold_202986.1
MAVKNKQMKRAEPESDLCFAGKPVSVVESMIRWPHRYPSKKTKLEAATATKGDKKEKIKLAKRHYEQALVDGVLINLNDDVYVTGLPGKLNFIGKVIEMFEADDGVPYSRIRWFYRPNDTLIERFAELVQKKRVFLSNVEDDNPLTCIYSKVNIAKVPLPKITSRIEQRVIPPCDYYYDMKYEVPYLNFTSADDDTAASSTLSSDSASNCFETLHKDEKYLLDLYSGCGAMSTGFCMGASIAGVKLITKWSVDINKFACDSFRHNHPETEVRNEAAEDFLILLKEWKRLCERFSLSSSTEPMESISELEDEESDENDDIDEASTGMELSAGEFEVEKFVGIVFGDPKGTGEKTLHLKGTVYSVCGGPPCQGISGYNRFRNKQAPLEDKKNQQLLVFLDIIDFLKPSYVLMENVVDLLRFSKGYLARHAVASFVAMNYQTRLGMMTAGSYGLPQVRNRVFLWAAQPTEDLQVGLIQKELLQLDNALTLADAISDLPPVTNSEANDVRNYNDAAPKTDFENFISLKRSETLLPVCGGDPARRLFDHQPLELRDDDLERISYIPKKKGANFRDMPGVLVHNNKAQLNLRVKRAKLKSGKNVVPAYAVSFIKGKSKKPFGRLWWDEIVNTVVTRAEPHNQCVIHPMQERVLSVRENARLQGFPDCYKLCGSIKEKYIQVGNAVAVPVGVALGYAFGMASQGLTDDEPVIKLPFKYPECMQGTNFEFLSALGNVSKDTGIVASMILNSTRDFEARVQYNEVEKKRCSTMIATLCRFKPPQTPEEVEGDLCAAFDKLSVDDFFKGDMPDWVPEDALTASDNLQYYEEKLQWAQPFELRKIIVQTREDVESKKWAKAENAILHCLQKPWLPSRLQCYHKENNG