Information report for RHC04H1G1390.2
Gene Details
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Functional Annotation
- Encodes a cytosine methyltransferase MET1. Required for silencing of FWA paternal allele in endosperm. Two lines with RNAi constructs directed against DMT1 have reduced agrobacterium-mediated tumor formation.
Homologous
- Capsicum annuum: T459_13543, T459_30572
- Daucus carota: DCAR_009626, DCAR_019941
- Juglans regia: Jr09_06540
- Manihot esculenta: MANES_13G119400
- Nicotiana attenuata: A4A49_19701
- Populus trichocarpa: POPTR_004G134000v3, POPTR_T046100v3, POPTR_018G138000v3
- Prunus avium: Pav_sc0000113.1_g130.1.mk
- Sesamum indicum: SIN_1025972
- Solanum lycopersicum: Solyc11g030600.3
- Solanum tuberosum: PGSC0003DMG400030941
- Vitis vinifera: VIT_07s0130g00390, VIT_07s0130g00380
Sequences
CDS Sequence
- >RHC04H1G1390.2
ATGGGTTCTCTCGCGCTCATCCATACTGATGCTGGACACAAAAAGAACAAACACAAACAAGATTCTGTGTCAAAAAGGAAGGCATCTGCAACTGATAAGAAGGAAAAGAAACAGCCTGTTTCTGAAACTATTGAGGAGCCCACTGCTGCACGTAAAAGGCCTAAGCGAGCTGCTGCCTGTTCAGATTTTAAAGAGAAATCTGTGCATTTATCAAAAAATTCTTCAGTCATTGAAACAAAGAAGGACCATTGTGTAGAGGAAGAGGATATGGCTATTAGGTTAACTGCAGGTCTGCAAGATTCTCAACGACCCTGTAGAAGATTAACGGATTTTGTATTTCATAACTCAGAAGGAATACCACAACCTTTTGGAATGTCTGAGGTTGATGATCTGTTTATCAGTGGTCTCATTTTACCACTTGAGGACAGTCTCGACAAAGTAAAAGCACAAAGAATTAGATGTGAAGGCTTTGGGCGTATTGAAGAATGGGCTATCTCTGGCTATGAAGATGGAACTCCTGTCATTTGGATCTCAACTGAGATAGCTGATTATGATTGTATAAAACCCTCAGGTAGTTATAAGAAGTTTTATGACCACTTCTTGGCCAAGGCAACGGCTTGCGTTGAGGTTTATAAGAAGCTTTCAAAGTCATCTGGAGGGAATCCTGATTTAAGCCTTGACGAGTTGCTTGCTGGGGTTGTCCGAGCGATGACTGGCATAAAATGCTTTTCAGGTGGTGTATCCATCAGGGACTTTGTCATCACTCAGGGCGGGTTCATCTATAAGCAACTTATTGGTCTGGATGATACATCAAAGAAGACTGATCAACTTTTTGTTGAGCTACCTGTCCTGGCTTCCCTTAAAGATGAAAGCAGTAAGCAGGAGACACTTGCACAACCAGAGCCTATATCATCTGGTAAGGCTCTACATATTGGCCCAAAAGCAGGAAATGGAGAAGACAAGATAGATGAATCTGGTTTGGCTAATGGTCCAGCGCCAGAAGATGAAAATCTGAAATTGGCAAAATTGTTACATGAAGAGGAGTATTGGTGCTCCTTGAAGCAGAAGAAAGGCCGCAATACGTCTTCCTCATCCAGCCAAATATACATCAAGATCAATGAGGATGAGATTGCAAGTGATTATCCTTTACCTGCATATTACAAAACATCTAATGAAGAGACAGATGAGTATATCGTCTTTGACAGTGGGGTTGATACATACCATATTGATGAGTTGCCTCGCAGTATGCTTCATAATTGGGCATTGTACAACTCGGACTCAAGGCTAATTTCTTTAGAACTCCTGCCAATGAAAGCATGTGCTGATATTGATGTAACCATTTTTGGGTCTGGAGTGATGACTGCTGATGATGGGTCTGGATACAATTTTGACACTGATGCTAATCATTCCTCTTCAGGTGGTACTAGATCAGCTGAGATTGATGGAATGCCAATTTACTTGAGTGCAATAAAAGAATGGATGATTGAGTTTGGGTCCTCAATGATCTTTATATCAATTCGGACTGATATGGCCTGGTATAGGCTTGGGAAGCCGTTGAAACAGTATGCTCCTTGGTACGAACCAGTCATAAAGACTGCAAGATTGGCAGTGAGCATCATTACTTTGTTAAAGGAACAGAATCGTGTGGCTAGACTTTCTTTTGGAGAAGTTATTAAAAGGGTTTCAGAGTTCAAGAAAGACCATCCTGCTTATATATCATCTAATGTAGATGTGGTGGAAAGATATGTGGTTGTACATGGGCAAATTATTCTGCAGCAGTTCTCTGAATTTCCTGATGCAAGCATCAGGAATTGTGCATTTGCGATTGGTCTCTCAATGAAAATGGAAGAGAGGCACCATACAAAATGGGTGATTAAGAAGAAGAAAGTGATGCAGAGACTTGAACAGAACTTAAATCCTAGAGCATCTATGGCGCCATCTGTAAAAAGGAAAGCTATGCAGGCTACTACAACAAGGCTAATCAACAGAATCTGGGGGGAATACTATTCCAATTACTCACCCGAGGTGTCAAAAGAGGTGGTTGATTGTGAGGTGAAGGATGATGAAGAAGCAGATGAGCAAGAGGAAAATGAAGAGGATGATGTTCCGGAGGAGAACTTGGATGTTCCAGAGAAAGCTCATACACCTTCTACAAGAAGGCATATTAAGTCATGTTCTGACAGCAAAGAAATAAAGTGGGATGGGGAATCAATAGGTAAAACAGCTTCTGGTGAACATTTGTTTAAAAGGGCTAGAGTTCATGGACATGAGATAGCTGTTGGGGACTCAGTTCTAGTGGAACATGATGAACCAGATGAGCTTCCTTCTATTTACTTTGTTGAATACATGTTTGAAAAATTGGATGGTAGCAAAATGCTTCATGGAAGAATGATGCAACGAGGATCTGACACTGTACTTGGAAATGCAGCTAATGAGAGAGAGGTATTTTTGATCAATGAATGCATGAATCTGCAACTAGGAGATGTCAAAGAAACTATAGCTGTCAATATCAGAATGATGCCTTGGGGACACCAGCATAGAAACACGAATGCTGATAAACTTGATAGAGCAAAAGCAGAAGACAGGAAGAGGAAGGGATTGCCGACTGAATTTTACTGCAAAAGCTTTTATTGCCCTGAGAAAGGTTCTTTCTTCAGACTCCCGTTTGATAAGATGGGTCTTGGTAATGGTTTATGCTACTCCTGTGAGTTGCAGCGAACTGATCAGGAAAAGGAATCCTTCAAGTTTGATATGTCCAACTCCAGTTTTGTATATCTGGGGACTGAGTATTCAGTTGATGACTTTGTTTATGTAAGCCCCGATCACTTTACTGCAGAAAGAGGGGGAAGTGGAACTTTCAAAGCTGGAAGAAATGTGGGGTTGATGGCCTATGTAGTATGTCAATTACTAGAAATTGTTGGTCCCAAGGGATCTAAACAAGCTAAAGTAGATTCTACAAACGTCAAAGTAAGGAGATTCTTCAGACCAGAGGATATATCTTCAGTTAAGGCATACTCTTCTGATATCCGGGAGATCTATTACAGTGAGGATATACACACAGTTCCTGTGGAAACAATCAAAGGTAAATGTGAAGTGAGGAAGAAGTATGATATTTCGTCTGAAGACGTCCCTGCCATCTTCGACCATATTTTCTTTTGTGAATATTTGTATGATCCATTGAATGGATCCCTTCAAAAGTTGCCAGCTCAGATAAAGTTGAGATTCTCAAAAATTAAGCTAGATGATGCGACATCAAGGAAGAGGAAGGGGAAGGGAAAAGAAGGAGAGGACGAAGTTGGGGAACTAAATGAAACTTCTCCTCAGAATCGTTTGGCCACACTAGATATCTTTGCTGGTTGTGGTGGCTTGTCTGAGGGGCTGCAGCATTCGGGTGTCACAGATACAAATTGGGCAATTGAATACGAAGAGCCTGCTGGAGATGCATTTAGACTTAATCATCCAAAGACAAAGGTGTTCATACATAATTGCAATGTGATTTTGAGGGCTGTCATGCAGAAGTGTGGAGATTCTGATGACTGTATCTCAACTCCAGAGGCTTCTGAATTAGCTGCAGCAATGGACGAGAACGAACTGAATAGTTTGCCACTTCCTGGACAAGTTGATTTCATTAATGGAGGCCCTCCTTGTCAGGGGTTTTCTGGAATGAATAGATTTAATCAGAGCACCTGGAGTAAAGTACAATGTGAGATGATTCTGGCATTTTTATCCTTTGCTGATTATTATCGGCCTAAGTTCTTTCTCTTGGAGAATGTTAGGAATTTTGTGTCATTTAGCCAAAAACAAACATTTCGCTTAACTGTTGCTTCCCTTCTTGAGATGGGTTATCAGGTTAGGTTTGGTATCCTTGAAGCCGGAGCCTTTGGAGTTCCTCAGTCTAGGAAGAGAGCATTTATCTGGGCTGCCTCCCCAGAGGAGGTTCTTCCAGAGTGGCCAGAACCAATGCATGTTTTTGCTGTCCCAGAATTAAAAATCGCATTATCTGAAACTTCACACTATGCAGCTGTGAGGAGTACTGCTAGTGGAGCTCCATTCCGTTCACTTACTGTTAGAGACACAATTGGAGATCTTCCTGTTGTTGTCAATGGGGCATGCAAGACTTGTATAGAGTATCAAGGTGACCCAGTATCCTGGTTCCAAAAGAAGATTCGGGGAAGCTCAATAACATTATCTGATCATATTTCAAAAGAGATGAATGAGCTTAACCTAATCAGGTGCCAAAGAATCCCCAAGCGGCCAGGAGCTGATTGGCGTGACCTTGAGGATGAAAAGGTTAAACTATCTAACGGTCAACTAGTTGATTTGATTCCATGGTGCCTGCCTAACACTGCTAAGAGGCACAACCAGTGGAAGGGGCTGTTTGGAAGGTTGGATTGGGATGGGAACTTCCCCACTTCCATTACTGACCCCCAGCCGATGGGTAAGGTGGGGATGTGCTTTCATCCAGAGCAAGACAGGATTGTTACAGTTCGTGAATGTGCACGTTCTCAAGGTTTCCCAGACAGCTACCAATTTTCTGGTAACATTTTGCACAAGCACAGGCAAATAGGAAATGCTGTTCCACCTCCTTTGGCATATGCACTTGGAAGGAAACTTAAAGAAGCTGTTGAGGGCAAGAAGAGGCTCACTTAG
Protein Sequence
- >RHC04H1G1390.2
MGSLALIHTDAGHKKNKHKQDSVSKRKASATDKKEKKQPVSETIEEPTAARKRPKRAAACSDFKEKSVHLSKNSSVIETKKDHCVEEEDMAIRLTAGLQDSQRPCRRLTDFVFHNSEGIPQPFGMSEVDDLFISGLILPLEDSLDKVKAQRIRCEGFGRIEEWAISGYEDGTPVIWISTEIADYDCIKPSGSYKKFYDHFLAKATACVEVYKKLSKSSGGNPDLSLDELLAGVVRAMTGIKCFSGGVSIRDFVITQGGFIYKQLIGLDDTSKKTDQLFVELPVLASLKDESSKQETLAQPEPISSGKALHIGPKAGNGEDKIDESGLANGPAPEDENLKLAKLLHEEEYWCSLKQKKGRNTSSSSSQIYIKINEDEIASDYPLPAYYKTSNEETDEYIVFDSGVDTYHIDELPRSMLHNWALYNSDSRLISLELLPMKACADIDVTIFGSGVMTADDGSGYNFDTDANHSSSGGTRSAEIDGMPIYLSAIKEWMIEFGSSMIFISIRTDMAWYRLGKPLKQYAPWYEPVIKTARLAVSIITLLKEQNRVARLSFGEVIKRVSEFKKDHPAYISSNVDVVERYVVVHGQIILQQFSEFPDASIRNCAFAIGLSMKMEERHHTKWVIKKKKVMQRLEQNLNPRASMAPSVKRKAMQATTTRLINRIWGEYYSNYSPEVSKEVVDCEVKDDEEADEQEENEEDDVPEENLDVPEKAHTPSTRRHIKSCSDSKEIKWDGESIGKTASGEHLFKRARVHGHEIAVGDSVLVEHDEPDELPSIYFVEYMFEKLDGSKMLHGRMMQRGSDTVLGNAANEREVFLINECMNLQLGDVKETIAVNIRMMPWGHQHRNTNADKLDRAKAEDRKRKGLPTEFYCKSFYCPEKGSFFRLPFDKMGLGNGLCYSCELQRTDQEKESFKFDMSNSSFVYLGTEYSVDDFVYVSPDHFTAERGGSGTFKAGRNVGLMAYVVCQLLEIVGPKGSKQAKVDSTNVKVRRFFRPEDISSVKAYSSDIREIYYSEDIHTVPVETIKGKCEVRKKYDISSEDVPAIFDHIFFCEYLYDPLNGSLQKLPAQIKLRFSKIKLDDATSRKRKGKGKEGEDEVGELNETSPQNRLATLDIFAGCGGLSEGLQHSGVTDTNWAIEYEEPAGDAFRLNHPKTKVFIHNCNVILRAVMQKCGDSDDCISTPEASELAAAMDENELNSLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYYRPKFFLLENVRNFVSFSQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKRAFIWAASPEEVLPEWPEPMHVFAVPELKIALSETSHYAAVRSTASGAPFRSLTVRDTIGDLPVVVNGACKTCIEYQGDPVSWFQKKIRGSSITLSDHISKEMNELNLIRCQRIPKRPGADWRDLEDEKVKLSNGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWDGNFPTSITDPQPMGKVGMCFHPEQDRIVTVRECARSQGFPDSYQFSGNILHKHRQIGNAVPPPLAYALGRKLKEAVEGKKRLT