Information report for RHC01H1G3766.2
Gene Details
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Functional Annotation
- encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.
Homologous
- Actinidia chinensis: CEY00_Acc21486, CEY00_Acc06633
- Capsicum annuum: T459_33912
- Daucus carota: DCAR_029800
- Gossypium hirsutum: Gohir.D13G183900, Gohir.A13G177300
- Juglans regia: Jr11_04720
- Manihot esculenta: MANES_08G108300
- Nicotiana attenuata: A4A49_40160
- Populus trichocarpa: POPTR_013G004600v3
- Prunus avium: Pav_sc0001938.1_g050.1.mk
- Prunus persica: PRUPE_6G306700
- Sesamum indicum: SIN_1022786
- Solanum lycopersicum: Solyc01g101020.3
- Solanum tuberosum: PGSC0003DMG400018294
- Vitis vinifera: VIT_14s0060g00580
Gene Resources
- Pfam: PF14826 PF00557 PF08512 PF08644
- UniProt: M1BK69
- RefSeq: XP_006358557.1
- AlphaFoldDB: M1BK69
- KEGG: sot:102589701
- OMA: YHINTIP
- InterPro: IPR000994 , IPR011993 , IPR013719 , IPR013953 , IPR029148 , IPR029149 , IPR033825 , IPR036005 , IPR040258 , IPR048969
- PANTHER: PTHR13980 , PTHR13980:SF23
- SUPFAM: SSF55920
- Gene3D: 2.30.29.150 , 2.30.29.210 , 2.30.29.30 , 3.40.350.10 , 3.90.230.10
- OrthoDB: M1BK69
- SMR: M1BK69
- CDD: cd01091
- eggNOG: KOG1189
- STRING: 4113.M1BK69
- HOGENOM: CLU_004627_1_0_1
Sequences
CDS Sequence
- >RHC01H1G3766.2
ATGGCTGATACCCGGAATAGTAATGTCAAGGTTTCTAATGACAAAGCATCCGGAACAGCCAATCCTTATGCCATCAATCTGGACAACTTCGGTAAAAGATTAAAAACATTATACTCCCACTGGACTGAACACAATGATGAACTTTGGGGAGCTTCTGAAGTTCTTGCCATAGGAACTCCTCCTCCATCTGAGGATCTGCGGTATCTGAAGTCGTCAGCTTTAAATATGTGGTTAGTTGGGTATGAATTTCCTGATACTATTATGGTTTTCATGAAGAAGCAGATCCATTTTCTTTGTAGCCAAAAGAAGGCCTCCTTACTTGAAGCTGTCAAGAAAACCTCCAAGGATGTTGTGGGAGTGGATGTTGTAATGCACGTGAGGTCTAAAAAGGATGATGGGACTGGTGCAATGGATGCAATTTTTCGAGCTATACAAGATCAGTCAGAGTCAAATGTGCCCGTTGTTGGACACATTGCGAGAGAAGCTCCTGAAGGGAATCTTTTAGAGACATGGACTGAGAAGCTAAAGAATACACAATTTCAGCTCAGTGATGTAACTAATGGATTCTCTGACCTGTTTGCTGTCAAGGACACCGCTGAAATTATGAATGTGAAGAAAGCTGGCTATCTGACTTCATCAGTGATGAAGCACTTTGTAGTCCCAAAGCTGGAAAGGGTTATCGATGAGGAAAAGAAGGTGTCACATTCTTCACTAATGGATGACACTGAAAAGGTCATACTGGAACCTGCAAAGATTAAGGTGAAGTTAAAGGCAGATAATGTCGACATCTGTTACCCTCCAATTTTTCAGAGTGGAGGGGAGTTTGATCTGAGACCAAGTGCATCAAGCAATGATCAGAATCTTTACTATGATTCGACAAGTGTGATTATCTGTGCAATTGGTTCTCGATATAATAGTTACTGCTCAAATGTTGCTCGAACCTTTCTAATTGATGCCAATCCAATGCAAAGCAAGGCTTATGAAGTCCTTCTGAAGGCCCATGAGGCTGCAGTTGGAGCTCTGAAACCAGGAAACAAGGCTGGAGATGTCTACCAAGCAGCACTCAATGTGGTTGAAAAGGAGGCACCTGAATTGGTTGCAAATTTGACAAGATCTGCAGGAACTGGAATTGGGCTTGAGTTCCGTGAATCAGGGTTAAACCTAAACGGCAAGAATGATAGAATACTGAAATCTGGCATGGTTTTTAATGTGTCTCTTGGGTTTCAGAATTTGCAAACAGAGTCTAAAAACCCAAAAACTGAAAAAATTTGTGTTTTGCTTGCTGATACAGTTGTTATTGGTCAAAATGCTCCAGAAGTGGTGACTTCTATGAGTTCTAAAGCTGTGAAGGATGTGGCTTACTCATTCAACGAGGATGAAGAAGAAGAGGAGGAGCAGCCGAAGGTCAAAGCTAAGCCTGTTGCCGCCAATGGACTCTCATCCAAGGCTATGCTTAGATCAGTTAACCACGAGACATCAAGGGAGGAACTAAGGCGGCAACACCAGGCAGAATTGGCCCGCCAAAAGAATGAAGAAACTGCACGGAGGCTCACAGGAGGAAGTTCTGGGGGTGCAGATAGTCGTGGTGCTGCAAAAGCCACTGGTGACCTGCTTGCATATAAGAACATTAATGATCTGCCACCTCCAAGAGAGTTGATGATTCAGGTTGACCAGAGGAGTGAGGCTATTCTTTTACCTATTCATGGTACCATGATTCCATTCCATATTGCCACCGTGAAAAGTGTATCTAGTCAACAAGATACTAACCGTACCTGCTATATCCGAATAATGTTCAATGTTCCTGGCACTCCATTCACTCCTCATGACACAAATACTCTAAAGTTCCAGGGATCAATATATGTTAAAGAAGTTTCATTTCGTTCAAAGGACCCAAGGCACATCACTGAAGTGGTTCAACAAATAAGAACCCTCCGCAGGCAGGTTGTCTCTAGAGAATCAGAGAGAGCTGAGAGAGCAACTTTAGTATCACAGGAGAAACTTCAAGTTGCTGGAGCCAAATTTAAGCCAATAAAGTTGTCAGATCTGTGGATTCGTCCGGTATTTGGTGGTCGCGGAAGAAAGCTTCCTGGTACTCTAGAGGCTCACACAAATGGATTCCGGTATGGAACTTCAAGGCCAGATGAGAGAGTGGATGTTATGTATGGTAACATCAAACATGCATTCTTCCAGCCAGCAGAAAAGGAAATGATTACAGTCCTCCACTTTCACCTGCACAATCACATAATGGTGGGGAACAAGAAAACCAAGGACGTGCAGTTCTATGTTGAAGTGATGGATGTTGTGCAGACAATTGGGGGTGGAAAAAGATCTGCTTATGATCCTGATGAGATTGAGGAGGAACAGCGTGAAAGGGATCGGAAAAACAAGATTAACATGGAATTTCAAACATTTGTGAACAAGGTAAATGACCTCTGGACCCAGCCTCATTTTAAAGGGCTTGATTTGGAGTTTGATCAGCCGTTGAGAGAGCTTGGATTCCACGGGGTGCCCCACAAGTCAACAGCTTTTATAGTCCCAACATCTAGCTGCCTTGTTGAGCTCGTAGAGACCCCTTTTGTTGTGATCACTCTCTGTGAGATTGAGATAGTCAACTTGGAGAGGGTTGGTCTCGGGCAGAAGAATTTTGACATGACAATTATATTCAAGGACTTCAAAAGAGATGTTATGCGAATTGATTCTATCCCTTCAACTTCCCTTGATGGCATCAAGGAGTGGCTCGATACAACTGACCTTAAGTACTACGAGAGCAGGCTGAATCTGAATTGGCGTCAGATACTGAAAACAATTACTGATGATCCAGAAGAGTTCATAGAGAATGGTGGATGGGAATTTTTGAATTTAGAAGGTACTGATTCGGAATCTGACAACTCACAGGAGTCTGATCAAGGATATGAACCTTCAGATGTAGAGCCTGTTTCGTCAGACGAGGAAGATGATGAAAGTGCATCACTAGTTGAGTCGGAGGATGATGAAGGAGAGGACTCTGAGGAATATTCAGAAGAAGAAGGGAAAACATGGGAAGAGCTGGAAAGAGAAGCAAGCAATGCCGACAGAGAGAAAGGAGCTGAATCAGACAGTGACAATGATAGGAAGAGGAGGAATATGAAGGCTTTTGGGAAAGGTCGTCCTCCAGAGAGAAGAAATCTCTCTAGCAACATTTCCAAGAGACCCAGGTTTAGGTAA
Protein Sequence
- >RHC01H1G3766.2
MADTRNSNVKVSNDKASGTANPYAINLDNFGKRLKTLYSHWTEHNDELWGASEVLAIGTPPPSEDLRYLKSSALNMWLVGYEFPDTIMVFMKKQIHFLCSQKKASLLEAVKKTSKDVVGVDVVMHVRSKKDDGTGAMDAIFRAIQDQSESNVPVVGHIAREAPEGNLLETWTEKLKNTQFQLSDVTNGFSDLFAVKDTAEIMNVKKAGYLTSSVMKHFVVPKLERVIDEEKKVSHSSLMDDTEKVILEPAKIKVKLKADNVDICYPPIFQSGGEFDLRPSASSNDQNLYYDSTSVIICAIGSRYNSYCSNVARTFLIDANPMQSKAYEVLLKAHEAAVGALKPGNKAGDVYQAALNVVEKEAPELVANLTRSAGTGIGLEFRESGLNLNGKNDRILKSGMVFNVSLGFQNLQTESKNPKTEKICVLLADTVVIGQNAPEVVTSMSSKAVKDVAYSFNEDEEEEEEQPKVKAKPVAANGLSSKAMLRSVNHETSREELRRQHQAELARQKNEETARRLTGGSSGGADSRGAAKATGDLLAYKNINDLPPPRELMIQVDQRSEAILLPIHGTMIPFHIATVKSVSSQQDTNRTCYIRIMFNVPGTPFTPHDTNTLKFQGSIYVKEVSFRSKDPRHITEVVQQIRTLRRQVVSRESERAERATLVSQEKLQVAGAKFKPIKLSDLWIRPVFGGRGRKLPGTLEAHTNGFRYGTSRPDERVDVMYGNIKHAFFQPAEKEMITVLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTIGGGKRSAYDPDEIEEEQRERDRKNKINMEFQTFVNKVNDLWTQPHFKGLDLEFDQPLRELGFHGVPHKSTAFIVPTSSCLVELVETPFVVITLCEIEIVNLERVGLGQKNFDMTIIFKDFKRDVMRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRQILKTITDDPEEFIENGGWEFLNLEGTDSESDNSQESDQGYEPSDVEPVSSDEEDDESASLVESEDDEGEDSEEYSEEEGKTWEELEREASNADREKGAESDSDNDRKRRNMKAFGKGRPPERRNLSSNISKRPRFR