Information report for RchiOBHm_Chr6g0312261
Gene Details
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Functional Annotation
- Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.
Homologous
- Actinidia chinensis: CEY00_Acc28201
- Citrullus lanatus: Cla97C08G156060
- Cucumis melo: MELO3C011203
- Cucumis sativus: CsGy2G022660
- Glycine max: Glyma.14G132500, Glyma.04G074300
- Gossypium hirsutum: Gohir.D13G185401, Gohir.A13G181900
- Juglans regia: Jr11_28260
- Manihot esculenta: MANES_18G079200
- Medicago truncatula: Medtr3g108660
- Nicotiana attenuata: A4A49_14084
- Populus trichocarpa: POPTR_005G179500v3
- Prunus avium: Pav_sc0003562.1_g090.1.mk
- Prunus persica: PRUPE_1G462800
- Vitis vinifera: VIT_04s0008g03170
Gene Resources
- Pfam: PF00443
- UniProt: A0A2P6Q1S8
- EMBL: PDCK01000044
- AlphaFoldDB: A0A2P6Q1S8
- OMA: GSCEEMP
- InterPro: IPR000626 , IPR001394 , IPR006615 , IPR018200 , IPR028889 , IPR029071 , IPR033841 , IPR035927 , IPR038765 , IPR044743 , IPR050164
- PANTHER: PTHR24006 , PTHR24006:SF722
- SUPFAM: SSF143791 , SSF54001 , SSF54236
- PROSITE: PS00972 , PS00973 , PS50053 , PS50235 , PS51283
- Gene3D: 3.10.20.90 , 3.30.2230.10 , 3.90.70.10
- OrthoDB: A0A2P6Q1S8
- CDD: cd01795 , cd02668
- STRING: 74649.A0A2P6Q1S8
Sequences
CDS Sequence
- >RchiOBHm_Chr6g0312261
ATGAGCCGGCCAAGTACTCGGAGTAAGAACAAACGAAATAAGCAAGGGGATAATGGTGACACCACTTCTGAAATATTGAGGAAAATTCATGCAACGGGTGAAATAACGAATCAGGATATAAACACACTGTATAAAAATTCAAAGCCGGTTTGTCAGGGCTGCCGTGTGAATACTAAAGACAATCCGAATTGCTTTTGTGGGCTAATTCCACCTCCTAATGGCAGTCGGAAATCTGGCTTGTGGCAGAAGACATCTGAGATTCTGCAAAACCTTGGCCCGGACCCTTCTCAGGATCTTCGTTCATCTGATGACTGTCCTGCAGGCCTCACAAATCTTGGTGCGACATGTTATGCTAACAGCATACTCCAGTGTTTGTATATGAACAAGCCCTTTCGTGAAGGTATCTTCTTGGTTGAACCTGATGTCTTGGAACAACAGCCGGTGTTGAATCAACTTTCTCGGCTTTTTGCACTGTTGCATCTCAGCAAAATGGCTTTCATAGACTCATCCCCATTTGTGAAAACTTTGGAGTTGGATAATGGAGTTCAACAGGACAGTCATGAATTTCTAACATTATTGCTGTCTTTGTTGGAACGTTGTCTAAGCCACTCTAAAATTTTGAAGGCAAAAGCTATTGTTCAAGATCTTTTCCGTGGAAGTGTGTCACATGTTACCAGGTGCTCAAAATGTGGAAAAGACTCTGAAGCTTCTTCAAAAATGGAAGACTTTTATGAATTGGAGTTGAATGTGAAGGGTCTGAAAAGTTTGGATGAGAGTTTAGATGATTACCTCAGTGTTGAAGAGCTTCAGGGAGACAATCAATATTTCTGTGAGTCATGTAAAACAAGAGTTGATGCTACTCGAAGCATCAAGTTGCGCACATTGCCTACTGTTCTGAATTTTCAGCTTAAGCGATGTGTTTTCCTTCCAAAGACGACAACAAAGAAGAAGATTACATCTGCATTTATGTTTCCTGGAGTACTTGATATGAGGCAGAGGCTATCTGAGCCTTCTCAGATTGAATCAATATATGACTTGTCAGCTGTGCTGATTCACAAGGGAACTGCAGTTAACAGTGGCCACTATGTAGCACATATCAAGGATGAGAAGACAGGGCAATGGTGGGAATTTGATGATGAGCATGTCTCAAACTTAGGGACTCACCCGTTTGGAGAAGGGACTTCTAGTTCCAATAGCAAGCCTCTTAAACCTGAAGCAGTTAACCCATCTTGCTCAGAACAGATGAATGGTGTTTCTAATGGTGATAAGATGGATATTGATCACCAACCTTCAGATTCTGTTACTAGTTGTGATGTGGAGACATTTTCATCAAGTGATGCATATATGCTGATGTATAATCTCAGGCATTCCTGGAAGGATAATGGGAAAACCCATGTTGAATGTAATGCCAATAATATGAAGATAGAAGATGGTAGTTTTTCTGGTTCTCTTCCATTTAATCTTTGTGAAGAGATTAAAAGCAGTAATGCATTATATCTTGAATCTTGCCGAAAATACACATTTAAGAAGGAAGAAGAGATGAGTTGTATCAAAGAACGAAGACAGGAAGTGCGCTCAATTTTGTCTGAAGCTCCTGTTCGATCACTTGAGGAACCTTTTTTTTGGGTTTCAACAGATTGGCTTCGTCAGTGGGCTGACCACATTACTCCACCTGTTCTTGACAACAGCTCCATCCAATGCATGCATGGAAAGGTTCCAGCATCTAAGGTTGGCTCCATGAAGCGGTTCTCAGCTGAAGCTTGGACCAAGTTGTTCTCTAAGCACAATGGGGGGCCAATTCTGACCAATGATGACTCCTGCACGATTTGCCTTATTGATGGGGCTCGAGATGTGGTCTCTGCTGACAGCTATAGGGATAGGAGAATATTAATGAAGCAAGTTGCTGAGGATGCCATTGCAGGGAGGTGTTCAGATGGAACATACTATGTTTCTAGATCATGGTTGCAGCAGTGGCTTAAAAGAAAAATTCTTGATGCTCCATCTGAAGCTGATGCAGGACCAACAGTTTCAATCAGGTGTCCTCATGGACAGCTTTTGCCTGAGCAAGCCCCTGGTGCTAAGAGATTGCTTATTCCAGAGATCCTCTGGCTCTTCATTTATCAAGATGCTTTAACAGTAAAACCTGCTGAGGACCTGGGTTGTTCAACTTTTCTCTCAGACTCTCTACAGTGTTCTGAGTGCAGTGATGAACTATCTGAAGTTGCATGCATGGAGGATTCTTTAAGATTGGTCAGGGAAAAACAGCGCCAGACTCATGATAAATTGGCTGCCGGGAAAAGTATTCCTCTTTCTCTGCATTGCAAGTATTACTTGATACCCTATTCTTGGCTTTCAAAATGGAGAACCTACATCAACGCAGCCGGAAGGAATATTTCTTCAGTAGAGAAACCGGAAACATTAGATGGCATCATGGATTTGATCAAGTGTGAAAAGCACTCACGACTTCTAGAAAGGCCTGTTGATCTGGTCTGTAAACGTGGTTTGATTTCACAAAAGTCTTCCCCTGTGGATGGGTTAGTATTCATTACTGAGAGTGACTGGAAATCCTTCTGTGAGGAATGGCGTGGTATTGAGGAAAAAGGTGTATCTGCTGAAATCAAGTTAAGTAATACTGAAGGAAATAACTTGGCAGAGTCCTCTGATGATATGCAAATCTGTGAGGAGGACTTGAGTACTCCAAATCTCGTGAATAGTGAAGTTGATTCTAGATCGCTTGTGATTAGGACTTTCCCTGAGATATGTGAGGACTGCATTGGAGAGAAAGAAAGCAGGGAGCTAATGCGAAAGCTTGAGTACTGCAATGAGGATATATATGTATACTTGGTACATGGCAAGGAAGCTCCAAAATATATTTTACAAGCATCTGAGACTAGTTTTGATCCAGATCGCCGAGTTTCCAAGCGCTCTCGAAAGACAAACACCGGAGATCAAATAAGTTTGAAAGTCTCTGGTTCTACATCGATATACCAGTTAAAAATGATGATATGGGAATCTTTTGGGGTTGTTAAGGAAAACCAGATACTTCACAAAGGCACCCGAATAATTGATAGTGAATGTGCTACTCTGGCAGACTTGAACATATTCCCTGGGGATAAGCTTTGGGTGACTGATTCAGAAGTCCATGAGAACCGAGATATTGCTGATGAGCTTTCTGACCAAAAAATGGATGTTCAACACACTGAAGAGGGTTTTCGAGGGACACTTTTGACGACAAATATCTCATCCCAAGTTGTTTAA
Protein Sequence
- >RchiOBHm_Chr6g0312261
MSRPSTRSKNKRNKQGDNGDTTSEILRKIHATGEITNQDINTLYKNSKPVCQGCRVNTKDNPNCFCGLIPPPNGSRKSGLWQKTSEILQNLGPDPSQDLRSSDDCPAGLTNLGATCYANSILQCLYMNKPFREGIFLVEPDVLEQQPVLNQLSRLFALLHLSKMAFIDSSPFVKTLELDNGVQQDSHEFLTLLLSLLERCLSHSKILKAKAIVQDLFRGSVSHVTRCSKCGKDSEASSKMEDFYELELNVKGLKSLDESLDDYLSVEELQGDNQYFCESCKTRVDATRSIKLRTLPTVLNFQLKRCVFLPKTTTKKKITSAFMFPGVLDMRQRLSEPSQIESIYDLSAVLIHKGTAVNSGHYVAHIKDEKTGQWWEFDDEHVSNLGTHPFGEGTSSSNSKPLKPEAVNPSCSEQMNGVSNGDKMDIDHQPSDSVTSCDVETFSSSDAYMLMYNLRHSWKDNGKTHVECNANNMKIEDGSFSGSLPFNLCEEIKSSNALYLESCRKYTFKKEEEMSCIKERRQEVRSILSEAPVRSLEEPFFWVSTDWLRQWADHITPPVLDNSSIQCMHGKVPASKVGSMKRFSAEAWTKLFSKHNGGPILTNDDSCTICLIDGARDVVSADSYRDRRILMKQVAEDAIAGRCSDGTYYVSRSWLQQWLKRKILDAPSEADAGPTVSIRCPHGQLLPEQAPGAKRLLIPEILWLFIYQDALTVKPAEDLGCSTFLSDSLQCSECSDELSEVACMEDSLRLVREKQRQTHDKLAAGKSIPLSLHCKYYLIPYSWLSKWRTYINAAGRNISSVEKPETLDGIMDLIKCEKHSRLLERPVDLVCKRGLISQKSSPVDGLVFITESDWKSFCEEWRGIEEKGVSAEIKLSNTEGNNLAESSDDMQICEEDLSTPNLVNSEVDSRSLVIRTFPEICEDCIGEKESRELMRKLEYCNEDIYVYLVHGKEAPKYILQASETSFDPDRRVSKRSRKTNTGDQISLKVSGSTSIYQLKMMIWESFGVVKENQILHKGTRIIDSECATLADLNIFPGDKLWVTDSEVHENRDIADELSDQKMDVQHTEEGFRGTLLTTNISSQVV