Information report for RchiOBHm_Chr6g0304051
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Actinidia chinensis: CEY00_Acc07494
- Daucus carota: DCAR_029206
- Glycine max: Glyma.09G185800
- Gossypium hirsutum: Gohir.D05G183500, Gohir.A05G180500
- Juglans regia: Jr11_19040
- Manihot esculenta: MANES_11G098200
- Medicago truncatula: Medtr6g084700
- Populus trichocarpa: POPTR_002G013100v3
- Prunus avium: Pav_sc0000367.1_g050.1.mk
- Prunus persica: PRUPE_1G356300
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: A0A2P6PZE8
- EMBL: PDCK01000044
- AlphaFoldDB: A0A2P6PZE8
- OMA: SSRGEMF
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: A0A2P6PZE8
- STRING: 74649.A0A2P6PZE8
Sequences
CDS Sequence
- >RchiOBHm_Chr6g0304051
ATGGAAGCAGCGGACCAACCCCAAAACCCTTACGATAACCAAAACGACGTCGTCTCCGGCGATTCCTCGCCGGAAACTGACCTCACCCGCTCATCGAGCCCTCAGGAAAACAACCAAAACGATTCACAGAACCAGTCCTCGGAAAACCCGTCGGCACCACCGCAAGCGCCCATTTCGGACTCTCAAGATGACTCCTCCGAACCCATCCCTGAAGACACCCCTAATGAACCGCCTCAAAACCCCGCCGGACCGGGTCCAGCAGAGACCACCAGCCTTCCGGCGAAACGACGCCGTCGCAGGAAGAAGTTTTTCACGGAGCTGATCGGCACTCCGTCGATGGCCAAGAGCCGCCGGACCGACCTCAACAAAGAGGTCGACACCGAAGCCCTGATCGCACTCTCGGTGGGGTTTCCGGTAGACTCGCTCACCGAGGAGGAGATCGAGGCCAACGTGGTCCCCACCATCGGCGGAGTTGAGCAGGCCAACTATATCGTCGTCCGGAACCACATTCTGTCCAGGTGGCGGTCCAATGTTTCGTTCTGGTTGACCAGAGAGCTGGCTCTGGAGTCGATTCGGCTGGAGCATAAAGGATTGGTCGACAAAGCTTACAATTTTCTGGTGGAGCACGGCTACATCAACTTCGGGCTAGCTCCGGCGATTAAAGAAGTGAAATTGAGGTCGTTTGATGGGTCGGAGAGGGGCAATGTGGTAATTGTGGGAGCTGGTTTGGCCGGTTTGGTGGCGGCCAGGCAGTTGGTGTTTTTGGGGTTCAAAGTTGTGGTATTGGAAGGCAGGAGTAGGCCTGGAGGGAGAGTGAAGACGAAGAAAATGAAAGGGGAGGGATTGGAGGCTGCAGCTGATCTCGGTGGGAGTGTCCTCACCGGAATAAATGGGAACCCACTAGGGGTTTTGGCTCGGCAATTGGAGCTGCCTCTTCATAAGGTGAGGGATCTTTGCCCTCTTTATTTACCAGATGGAAAATCTGTGAATTCTGAAATTGATGATAGAATAGAGGCTTCTTTTAATAAATTGTTAGATAGAGTTTGTAAGCTTAGACATGCAATGATTGAGGAAGTTAAGTCCGTAGATGTTCCGTTAGGGACTGCACTGGAAGCTTTTCGAAGAGTGTGTAATGTGGCTCAGGATCCGCAGGAGAGAATGCTCTTGGATTGGCATCTTGCTAATTTGGAATATGCAAATGCCACCTTGATGTCTAATTTGTCAATGGCGTATTGGGATCAGGATGATCCCTATGAGATGGGTGGTGACCATTGTTTTATTCCCGGAGGCAATGAGACCTTTGTGCGAGCCCTTGCAGAGGGCCTTCCAATTTTCTATGACAGGACTGTGGAAAGTATTAGGTATGGAACTGATGGGGTTTTGGTTTATGCAAATGGCCAGGAGTTTCGAGGGGACATGGTTCTTTGCACTGTGCCATTAGGTGTGCTTAAGAAGGGGTCAATTGAATTTGTCCCAGAGCTGCCACAAAGGAAGAGAGATGCAATTCAGAGTTTGGGATTTGGATTGTTGAATAAGGTTGCCATATTGTTTCCTTATAACTTTTGGGGTGGAGACATTGATACTTTTGGGCATTTGACTGAGGATCCGTGTATGAGAGGAGAGTTCTTTCTGTTTTATAGCTATTCTTCTGTGTCAGGAGGCCCTCTTCTAGTTGCGCTTGTTGCAGGAGATGCTGCCATTAAGTTTGAGCTGATGTCTCCCGTCGAATCTGTGAATAGGGTGTTGGAGATACTGAGGGGCATTTTCCACCCGAAAGGTATTGCTGTTCCGGAACCTATTCAGGCAGTGTGCACTCGGTGGGGGAAGGATGACTTTGCATACGGGTCATATTCATATGTTGCAGTAGGTTCTTCAGGAGATGATTACGATATTCTAGCAGAGAGCATTGGGGATGGGAGAGTATTCTTTGCTGGAGAGGCCACTAACAAGCAGTATCCGGCAACAATGCATGGAGCTTTGCTCAGTGGGATGAGAGAGGCTGCTAACATGTTGAGAGTAGCTAAAAGGAGGTCAATAATCCCCTCACAGAAATTTAATAATGCTTCCGAGGACAATGAGGATTTGGATAAATTATTTGACACCCCTGACTTAACATTTGGGAGCTTCTCCGTTTTGTTCGATCCCAGGTCATCGGATCCTGATTCTACATCCCTGTTTAGGGTTAAACTCGGAGGGGAAAAGTTGGACATGGGATGTTTCAGTTTGTATGGCTTAATATTAAAGAAGCATGCCTTCAAGCTGAGAGATGTAGAAGGTGATGGGAACAGGATGACAATGTTGAATTTTGAATTCGGAGTGAGGCTGGTTGGGAGAAAAGGTCTGAGTGGTGTTGCGGAATCTCTGATCACCTGCATTAGATTAGCAAAATCAGGTATGAAACAGTAG
Protein Sequence
- >RchiOBHm_Chr6g0304051
MEAADQPQNPYDNQNDVVSGDSSPETDLTRSSSPQENNQNDSQNQSSENPSAPPQAPISDSQDDSSEPIPEDTPNEPPQNPAGPGPAETTSLPAKRRRRRKKFFTELIGTPSMAKSRRTDLNKEVDTEALIALSVGFPVDSLTEEEIEANVVPTIGGVEQANYIVVRNHILSRWRSNVSFWLTRELALESIRLEHKGLVDKAYNFLVEHGYINFGLAPAIKEVKLRSFDGSERGNVVIVGAGLAGLVAARQLVFLGFKVVVLEGRSRPGGRVKTKKMKGEGLEAAADLGGSVLTGINGNPLGVLARQLELPLHKVRDLCPLYLPDGKSVNSEIDDRIEASFNKLLDRVCKLRHAMIEEVKSVDVPLGTALEAFRRVCNVAQDPQERMLLDWHLANLEYANATLMSNLSMAYWDQDDPYEMGGDHCFIPGGNETFVRALAEGLPIFYDRTVESIRYGTDGVLVYANGQEFRGDMVLCTVPLGVLKKGSIEFVPELPQRKRDAIQSLGFGLLNKVAILFPYNFWGGDIDTFGHLTEDPCMRGEFFLFYSYSSVSGGPLLVALVAGDAAIKFELMSPVESVNRVLEILRGIFHPKGIAVPEPIQAVCTRWGKDDFAYGSYSYVAVGSSGDDYDILAESIGDGRVFFAGEATNKQYPATMHGALLSGMREAANMLRVAKRRSIIPSQKFNNASEDNEDLDKLFDTPDLTFGSFSVLFDPRSSDPDSTSLFRVKLGGEKLDMGCFSLYGLILKKHAFKLRDVEGDGNRMTMLNFEFGVRLVGRKGLSGVAESLITCIRLAKSGMKQ