Information report for RchiOBHm_Chr5g0054631
Gene Details
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Functional Annotation
- Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.
Homologous
- Actinidia chinensis: CEY00_Acc30068
- Capsicum annuum: T459_28656
- Citrullus lanatus: Cla97C02G048110
- Cucumis sativus: CsGy6G012460
- Glycine max: Glyma.12G087000, Glyma.11G237700
- Gossypium hirsutum: Gohir.A05G082500
- Juglans regia: Jr14_17170
- Manihot esculenta: MANES_04G006100
- Medicago truncatula: Medtr4g054980
- Nicotiana attenuata: A4A49_19906
- Populus trichocarpa: POPTR_004G185700v3
- Prunus avium: Pav_sc0000013.1_g050.1.mk
- Prunus persica: PRUPE_6G124200
Gene Resources
- Pfam: PF00136 PF03104 PF08490
- UniProt: A0A2P6QG64
- EMBL: PDCK01000043
- OMA: MLDQCRY
- InterPro: IPR006133 , IPR006172 , IPR012337 , IPR013697 , IPR023211 , IPR029703 , IPR036397 , IPR042087 , IPR043502 , IPR054475 , IPR055191
- PANTHER: PTHR10670 , PTHR10670:SF0
- SUPFAM: SSF53098 , SSF56672
- Gene3D: 1.10.132.60 , 3.30.342.10 , 3.30.420.10 , 3.90.1600.10
- OrthoDB: A0A2P6QG64
- CDD: cd05535 , cd05779
- STRING: 74649.A0A2P6QG64
Sequences
CDS Sequence
- >RchiOBHm_Chr5g0054631
ATGAGCGGCTACGAGAGCCGGAAACGGGACCGGAGAGACGCGTGGAGCTCCAAGAAGCAGCAGAAGCTCACGCGCACCGCCGACGAAGACCTCGAGTCAAAGCTCGGATTCGATCTATTCTCCGAAGGTGAAACTAGGCTCGGCTGGTTACTCACTTTCGCAACGTCATCCTGTGAAGATCAAGACACCCATAAAGTTTATAGCTGCGTCGATCTGTATTTCGTTACACAGGATGGCTCTGCTTTCAAGTCAAAATATAAGTTTCGCCCTTATTTCTATGCAGCCACAAAGGAAAAAATGGAAATGGATGTTGAAGCATATTTGAGACGGCGCTATGAAAGTCGTATTGCTGATATCGAAATAGTGGCGAAAGAAGATCTTGATCTTAAAAACCATTTGTCTGGCCTACACAAGTCCTATTTGAAGTTATCATTTGATACTGTTCAACAATTAATGAATGTCAAGAGTGACCTATTGCAAGTCGTCGAAAGAAACCACACAAAATTTGATGCTGCTGAAGCTTATGAGTCAATACTGCTAGGGAAACGGGAACAAAGGCCTCAAGATTTCCTAGATTGTATTGTTGATCTTCGTGAATACGATGTTCCCTACCATGTTCGCTTCGCTATTGACAATGATGTGCGATGTGGCCAGTGGTACAATGTTAGTGTATCCAGTGCGGGTGTTATGCTTGAGAGGAGGACAGATCTTCTGCAGCATGCTGAAGTTCATGTTTGTGCATTTGATATTGAGACAACTAAGCTGCCCTTAAAATTTCCAGATGCTGAATATGATTTAATAATGATGATTTCATACATGGTTGACGGACAAGGGTACCTGATTATTAATAGAGAGTGTGTTGGAGCTGATATAGAGTATTTGGAGTACACTCCAAAAGAAGAATTTGTAGGGCATTTCAAGGTGACAAATGTGGAAAATGAGAGAGAGCTTCTAAGACAGTGGTTTGCCCATATGCGGGAGGTGAAGCCTGGAATCTATGTCACATACAATGGTGATTTTTTCGATTGGCCTTTCCTGGAAACGAGAGCTGCACATCATGGGTTCAAAATGAATGATGAGGTTGGATTTTTATGTGACAAGAATCAGGGGGAATGTAGAGCTAAATTTGCTTGTCATCTTGATTGCTTTGCTTGGGTCAAACGTGATAGTTATCTGCCCCAAGGGAGCCAGGGCCTTAAGGCTGTTACAAAGGCAAAGTTGGGTTATGATCCAATAGAGGTGAATCCTGAGGATATGGTTCGCTTTGCGAAAGAAGAACCTCAGAGGATGGCATCCTATTCTGTTTCTGATGCTGTTGCAACCTATTACTTGTACATGACCTATGTTCATCCATTTATCTTCTCTCTTGCAACTATTATTCCAATGTCTCCGGATGAGGTTTTGCGTAAGGGTAGTGGAACCCTTTGTGAAATGCTTTTAATGGTCCAGGCATACAAGGCAAATGTCATCTGTCCTAACAAGCACCAATCTGACCCGGAAAAGTTCTATAAAAACCACCTTTTGGAAAGTGAGACTTACATAGGTGGCCATGTGGAATGCCTTGAAAGTGGTGTTTTCAGATCTGATCTTCCAACTAATTTTAGGCTTGATCCAGCTGCTTATGAGCAATTGATCAACAACCTTGATCGAGATCTTCAATATGCTATCAGAGTAGAGGGAAAGATGGACTTGGATTCTGTGTCCAATTATGATGAAGTGAAGGGTTCTATTCTGGAAAAGCTTGTGAGGTTGCGAGATGAACCAATACGAGAAGAATGCCCACTTATTTATCACCTGGATGTAGCTGCAATGTATCCCAACATTATTTTAACAAACAGGCTTCAGCCCACATCAATTGTTACAGATGAGGTCTGCACTGCTTGTGATTTCAACCGTCCAGGGAAGACATGTCTACGAAAGCTGGAATGGGTTTGGCGTGGAGAAATATTCATGGCAAAAAGAAGCGACTATTATCATTTGAAGAAGCAAATTGAGTCTGAGTCTGTTGACGGTGCCACTTCCAAGCAGTCAAGGTCTTTTCTTGACTTGCCTAAAATGGAACAACAAACAAGGCTCAAAGAACGTCTAAAGAAATACTGTCAGAAGGCATATAAACGTGTAGTAGACAAGCCAGTCACTGAACTTCGGGAAGCAGAGATTTGCATGAGGGAAAATTCATTCTATATTGACACAGTTCGCAGCTTTCGAGATAGAAGGTACGAGTATAAAGGGCTTAATAAGGTTTGGAAGGGCAAGTTGTCTGAAGCAAAGGCTAGTAAAAATTCTATAAAAATCCAGGAAGCACAAAATATGGTGGTGCTTTATGATTCCCTACAACTTGCACATAAGTGTATACTTAACTCCTTTTATGGATACGTCATGCGCAAGGGTGCAAGATGGTATTCAATGGAAATGGCTGGAGTAGTTACATATACTGGAGCTAAAATTATTCAGAATGCTCGGCTGCTAGTTGAAAAAATTGGAAAGCCTCTTGAGTTAGATACAGATGGTATCTGGTGTGTGCTTCCTGGATCTTTTCCAGAGAACTTTACTTTCAAAACAAAAGACTTGAGGAAGAAGCTAACTATCTCATATCCATGCGTCATGCTTAATGTTGATGTGGCGAGAAACAATACAAACGATCAATACCAGACTCTTACAGATCCGATCGAGAAAACTTATGCAACTCATAGTGAATGTTCAATTGAATTTGAAGTGGATGGACCATACAAGGCAATGATTATTCCTGCTTCTAAGGAAGAAGGAATTCTAATTAAGAAGCGCTATGCTGTCTTTAATGATGATGGGACCCTTGCTGAACTTAAAGGTTTTGAGATCAAACGTAGAGGTGAGCTGAAGCTCATCAAAGTTTTCCAGGCTGAACTTTTTGATAAGTTCCTTCACGGTTCTACATTAGAGGAATGCTATTCAGCAGTTGCTTCTGTTGCCAACCGCTGGCTTGATCTTCTTGATAATCAAGGAAAGGATATAGCAGACAGTGAGTTGCTTGATTATATATCAGAATCAAGCACCATGAGCAAGTCTTTGGCGGAATATGGAAGCCAAAAGTCATGTGCAGTAACCACTGCAAGGCGTCTTGCTGATTTTCTTGGTGATACAATGGTCAAAGATAAAGGACTACGTTGCCAGTATATAGTTGCATGTGAACCAAAGGGAACACCTGTCAGTGAGCGTGCTGTTCCAGTTGCAATATTCGAAACAGATGCTGAAATTATGAAGTTTTATGTACGGAAGTGGTGCAAGGTCTCTGATGTTGACATCAGATCCATTATAGATTGGTCCTATTACAAACAACGTCTAGGTTCAGCAATTCAGAAAATCGTCACAATTCCCGCTGCAATGCAAAAGGTTGCAAATCCTGTCCCTAGGGTAGTCCATCCTGATTGGCTACATAAGAAGGTTCGTGAGAAGGAAGATAAATTTCGACAACGCAAATTGGTTGATATGTTCAGGTCGAATGGGGATCATCTGGTGCAAAACGATGATGCTATTGGCTCTAATCATGTGGTAGATGAAGATATTGTTGAAGATTTGGAAGACTTCAAATGCAAAAGCAGTTCCATAAGTAGACCGAGACCAATTGTTCACTGTTATGAAGTTAATAACCAGAAAAATTCAGTCAAGGCAAACGGTAAAGGAGGTCCAGAGCAACAACAAACTAATCATATAGAAAATGCTCATCAAGAGCAAACTGCTGTCACTCAGGAAGAAATTGACAAAAATGTAGATTATCAAGGATGGCTTGCAATAAAGAAAAGAAAGTGGAAAGATACTCTTGACAAGAGGAAGAAACAACGATTGAATAATGCAAGGTCTGCTCATAATGCTAATGACAAGATGCTTGGTGGTGGGAGAAATCTCAAAGGGGCTCAGGGGAAAATAGGTGTGAATTCATATTTTAGGAGTCATGAAGATGCCCTAACTCGCTGTCATTGGCAGATATTACAACTAGTTCCGAGTTCTGAGAGTGGCCAAATTTTGGCGTGGCTTGTTGTTGAAGGAATGATGCTTAAGATTCCTCTAAATGTTCCAAGAATTTTTTACATCAATTCTACATCACCTATAAAAGAAGAATTGAAAGAAGAATTACCAGGGAAGTATGTCAACAAGACTCTTCCTCATGGAAGACATAGTTATTACCTATTTGAGGTTTCAGTTGATGAGAAGAGGTTTAGGACACTGAGAAAAAAGCTTGCGGCTCTTATCGCTGATCCAGATATTGAGGGAATATATGAAACAAAGGTGCCTTCGGAGTTTAATGTAATCACTCAGATTGGTTGTGTCTGTAAATTGGACAAAAAAGCTCAGGGAGATGCCAAAAGTGGCTGGAGTGTTAGTGCACTGGACATGAAGAATACGACAGAGTGCTCTTATCTGGCCCAATCCATTGCTTTCTTTTATTTGTATCACAGCATCTCTGAAGGGCGCGCAATATTTGTTGCTTATTTTCCTGCATCAAGAACAATAATTGTTGTGGTGGTGAATCCTTATCAAAATAAAGATTTGTCACCATCTTTTCTTGAAAAACAATTCCGCGACGCTTGCCAGGCATTATCACTTCAGCTGCCTCCTAGGAATGGAATCATTATCAAGGTAGACTACGTTGGATATGTAAAGGATGCTGAAAAGATTTTGCACCAAGCAATTAATGAGCACAGACATGATCATGGACCTACAGTTGCTGTTATTGAATGCCCAAATGTTCAGTTAATGAAGTCAGGTATACGAGCTCTTGATGATTTTCCATGTGTGAGCATTCCATGTAATGCTCGAGACAGTCAATATCAGGTCCTTGGGTGGCAACAAGTGGCCGCAAAAATTGGCATGCAACGATGTGCTGCATCATCTCAGTGGTTGATTGATAGAATTTCTCTCTCAAGATATGCACATGTACCATTGGGCAATTTTGAAGTTGACTCCCTTATGCATACAGCTGATATCTTCTTTTCAAGAGCATTACGTGATAGCCAGCAGGTGCTTTGGATATCTGATGATGGTATTCCAGATCTAGGAGGCATTAACGAAGAAGGTGGATTTTTTGCAGATGAGGTCCATCAACCATTTGTAATTACTAAACCTGGAGCATATAGAAAGGTCACTGTGGAGCTAAAGATACATCATCTGGCTGTAGATGCTCTTCTGAAAAGCAACCAAGTGAATGAAATGGAAGGAGGTGCTTTGCTAGGATTTGAATCAGACATGAACTCCGGATCACATACCTCTAATATGCAGGCTGCCTTTGATGAAGCTACATCATCTGCACCTGCATTCCGTGTTTTGAAACAGTTGATCCACCGGTGTCTTGCAGATGCACATACATCTGGAAATGTGTATGCTGATGCACTACTGCAACATCTGTATCGATGGCTTTGCAGCCCCCAGTCTAAACTTCATGATCCAGCACTTCAACGCCTACTTCACAAGGTCATGAAAAAGGTGCTTTTGATTTTATTGGATGAGTTCCGCAAATTGGGTGCAACTATCATATTTGCAAATTTCTATAAGGTTATTATAGACACAGGAAAATTTGATATATCCGCAGCCAAAGCTTATTGTGATAGTGTGCTTAAAACTCTCCAGAAAAGAGAACTATTTGAGTGGATTGAGCTTGAACCATTGCACTACTGGCATTCTTTGCTTTTCATGGATCAGTATAATTATGGTGGAATTCCGGTTAGAGCTGATGAAAGCATGCATGGTGAATCTCAAGTGGATATCGTATCGAGCTGGAACATTGCTGAATACTTACCCAAGAAAATTCAGGACCATTTTATTTTTATTGTTTCTCAGTTTTTGTATATTCCCTGGAATTATGCACAGAAGCAGTCGGCCATTAGAGCGACTTTACAGGATGGCAGCAGTTGCACACAATCAATTACGGTTGCAGCTGCTGAGACTTTGGAATCTCACATGACCGATTTTCTTAAAGGACAGATCAGCTCGTACTTTACTGAAAAGCTTCTGGGAATTGTTCGTGATACAATACTTCATATGAAGGAACTGAACAAGTCCGAGAATGACTATCGGACATCTCCTGGGCTGCCACAACTTGCTGGTAATATCCACAAAGGAGATGCGGCACTTGAGTTCATTAAGAATGTCTGCGGTGTTTTGCTCATTGACCAAAGTGTTGAGCACGATGTTATGGTAATGAGAAGTAATCTATTAAAATATATGCATGTGAGGGAGTCTGCTCCTGAAGCTCAGTTTTGTGATCCCTGCCCATCCTTGTTCTTACGAAATGTCATTTGCAGCTACTGCAATGACTGTAGAGACCTAGACATCTGCCGTGATTCAGCTCTACTAGCTGGGGAGTGGCGCTGTGCTGTGCCCCAATGCGGGCAGCCTTATGACAGAGAGCTTATGGAGAATACCCTTCTTCAGATTGTACAGCAGAGAGAGCGTCTCTACCAGCTACAGGATCTGGTGTGTCTCAGGTGTAACCAAGTGAAAGCTGCACATTTAGCAGAACAATGTGGATGTGCCGGCTCTTTTAGCTGTAAGGAAGACGCAGCTGAATTTTGTGAAAAGATGCAGCTAATCTTGAAAATTGCAATTCATCAGAAATTTCAATTTCTACAAGAGTGCACTGAGTGGATTTTGGAAGTTGAGAAACATTAA
Protein Sequence
- >RchiOBHm_Chr5g0054631
MSGYESRKRDRRDAWSSKKQQKLTRTADEDLESKLGFDLFSEGETRLGWLLTFATSSCEDQDTHKVYSCVDLYFVTQDGSAFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESRIADIEIVAKEDLDLKNHLSGLHKSYLKLSFDTVQQLMNVKSDLLQVVERNHTKFDAAEAYESILLGKREQRPQDFLDCIVDLREYDVPYHVRFAIDNDVRCGQWYNVSVSSAGVMLERRTDLLQHAEVHVCAFDIETTKLPLKFPDAEYDLIMMISYMVDGQGYLIINRECVGADIEYLEYTPKEEFVGHFKVTNVENERELLRQWFAHMREVKPGIYVTYNGDFFDWPFLETRAAHHGFKMNDEVGFLCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPIEVNPEDMVRFAKEEPQRMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYKNHLLESETYIGGHVECLESGVFRSDLPTNFRLDPAAYEQLINNLDRDLQYAIRVEGKMDLDSVSNYDEVKGSILEKLVRLRDEPIREECPLIYHLDVAAMYPNIILTNRLQPTSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMAKRSDYYHLKKQIESESVDGATSKQSRSFLDLPKMEQQTRLKERLKKYCQKAYKRVVDKPVTELREAEICMRENSFYIDTVRSFRDRRYEYKGLNKVWKGKLSEAKASKNSIKIQEAQNMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLRKKLTISYPCVMLNVDVARNNTNDQYQTLTDPIEKTYATHSECSIEFEVDGPYKAMIIPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLAEYGSQKSCAVTTARRLADFLGDTMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKFYVRKWCKVSDVDIRSIIDWSYYKQRLGSAIQKIVTIPAAMQKVANPVPRVVHPDWLHKKVREKEDKFRQRKLVDMFRSNGDHLVQNDDAIGSNHVVDEDIVEDLEDFKCKSSSISRPRPIVHCYEVNNQKNSVKANGKGGPEQQQTNHIENAHQEQTAVTQEEIDKNVDYQGWLAIKKRKWKDTLDKRKKQRLNNARSAHNANDKMLGGGRNLKGAQGKIGVNSYFRSHEDALTRCHWQILQLVPSSESGQILAWLVVEGMMLKIPLNVPRIFYINSTSPIKEELKEELPGKYVNKTLPHGRHSYYLFEVSVDEKRFRTLRKKLAALIADPDIEGIYETKVPSEFNVITQIGCVCKLDKKAQGDAKSGWSVSALDMKNTTECSYLAQSIAFFYLYHSISEGRAIFVAYFPASRTIIVVVVNPYQNKDLSPSFLEKQFRDACQALSLQLPPRNGIIIKVDYVGYVKDAEKILHQAINEHRHDHGPTVAVIECPNVQLMKSGIRALDDFPCVSIPCNARDSQYQVLGWQQVAAKIGMQRCAASSQWLIDRISLSRYAHVPLGNFEVDSLMHTADIFFSRALRDSQQVLWISDDGIPDLGGINEEGGFFADEVHQPFVITKPGAYRKVTVELKIHHLAVDALLKSNQVNEMEGGALLGFESDMNSGSHTSNMQAAFDEATSSAPAFRVLKQLIHRCLADAHTSGNVYADALLQHLYRWLCSPQSKLHDPALQRLLHKVMKKVLLILLDEFRKLGATIIFANFYKVIIDTGKFDISAAKAYCDSVLKTLQKRELFEWIELEPLHYWHSLLFMDQYNYGGIPVRADESMHGESQVDIVSSWNIAEYLPKKIQDHFIFIVSQFLYIPWNYAQKQSAIRATLQDGSSCTQSITVAAAETLESHMTDFLKGQISSYFTEKLLGIVRDTILHMKELNKSENDYRTSPGLPQLAGNIHKGDAALEFIKNVCGVLLIDQSVEHDVMVMRSNLLKYMHVRESAPEAQFCDPCPSLFLRNVICSYCNDCRDLDICRDSALLAGEWRCAVPQCGQPYDRELMENTLLQIVQQRERLYQLQDLVCLRCNQVKAAHLAEQCGCAGSFSCKEDAAEFCEKMQLILKIAIHQKFQFLQECTEWILEVEKH