Information report for RchiOBHm_Chr3g0458161
Gene Details
|
|
Functional Annotation
- encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.
Homologous
- Actinidia chinensis: CEY00_Acc21486, CEY00_Acc06633
- Citrullus lanatus: Cla97C01G025100
- Cucumis melo: MELO3C007085
- Glycine max: Glyma.18G044500
- Gossypium hirsutum: Gohir.A11G275000, Gohir.A13G177400, Gohir.D13G184000
- Manihot esculenta: MANES_08G108300
- Prunus avium: Pav_sc0001938.1_g060.1.mk
- Prunus persica: PRUPE_6G306600
- Vitis vinifera: VIT_14s0060g00580
Gene Resources
- Pfam: PF14826 PF00557 PF08512 PF08644
- UniProt: A0A2P6R7S4
- EMBL: PDCK01000041
- AlphaFoldDB: A0A2P6R7S4
- OMA: HTWPPVT
- InterPro: IPR000994 , IPR011993 , IPR013719 , IPR013953 , IPR029148 , IPR029149 , IPR033825 , IPR036005 , IPR040258 , IPR048969
- PANTHER: PTHR13980 , PTHR13980:SF18
- SUPFAM: SSF55920
- Gene3D: 2.30.29.150 , 2.30.29.210 , 2.30.29.30 , 3.40.350.10 , 3.90.230.10
- OrthoDB: A0A2P6R7S4
- CDD: cd01091
- STRING: 74649.A0A2P6R7S4
Sequences
CDS Sequence
- >RchiOBHm_Chr3g0458161
ATGGCTGATAATCGAAATGGAAATAGTAAGCCTACAAAGGCAGCTGGAGCAGGAAACAATCCCTATTCCATTGATTTGAATGTCTTCAGTCAGAGATTGAAGTCCCTCTATTCGCACTGGAATGAGCAGCCTGAGTTGTGGGATTCTAGTGACGTTATTGCGATTGCAACACCGCCGCAATCAGATGAAATCCGGTACCTTAAGTCTTCAGCATTGCAGATGTGGTTGGTTGGGTATGATGTTCCAGATACGATAATGGTGTTCATGAAGAAGGAGATTCATTTCTTGGGTAGCCAGAAGAAGGTGTCTTTTTTCCAAGGTGTGAAGAAGTCTGCCAAAGACGCTGTGGGTGTTGATGTTGTGACGCATGTGAAGGCAAAGAGTGATGATGGCAGTGCTCTGATGGATACTATTTTGGGTGTAATTCGTGCCCAACCAAAGGCTGATGGCCGTGATACTGTTATTGTAGGAAGGATAGCAAGGGAGGATCCTGAGGGGAATCTTTTAAAATTGTGGTTTGAGAAGCTGAAGAGTGCAACTGTTCAGCTTGGTGATGTAACAAATGGGTTGTCTGACTTGTTTGCTGTCAAGGAGAAAGAGGAACTTGGTAATGTCAAGAAAGCCGCTTACTTAAATACTCTTGTTATGCAGAAAATGGTGGCGAAGCTTGAGAGTGTTATTGATGATGAGAAGAAGGTCACTCACTCTTCTTTGATGGATGAGACAGAGAAACTTATACTGGAACCCTCTAAAGTTGGGCTGAAGCTCAATCCTCAGAATGTTGATATCTGTTACCCTCCAATCTTTCAGAGTGGAGGAAAGTATGATCTCAGACCTGGTGCTGCCAGCAATGATGAGCTTCTTTATTATGATTCTGCAAGTGTGATCATATGTGCTGTTGGATCTCGTTATCACAATTACTGCTCGAATGCTGCCAGGACTTTTTTGATTGATGCTAATCCCCTTCAGAGCAAGGCATATGAGGTTCTTCTCAAGGCCCATGCTGCAGCCATTAGTGAGTTGAAGCCTGACAATAAAGCCAGTGCTGCATATCTAGCAGCACTGGCTGTTGTAGAGAAGGATGCTCCTGAACTATTACCTAATCTGACAAAATCTACGGGGACAGGCATTGGTATTGAGTTCCGTGAATCTGGGTTGAATCTTAATGCAAAAAATGACCGGGTGGTGAAAGCTGGCATGGTCTTTAATGTGTCACTCGGTTTTCATAACTTGCAGAGTGGTATCAGTGATCCAAAGCACCAGAACTTCTCTTTGTTGCTAGCTGACACTGTTGTTGTCAACAATGACAAACCAGAGGTGCTGACAGTAAAAGTTTCTAAAGCTGTTAAAGATGTGGCATACTCCTTTAATGAAGTTGAAGAAGAAAAGCCTGAGAAAGGAAAAGGTCCAGCTAATGGAACAGAGGCCTTGATATCTAAAACCAATCTGAGGTCAGACAATAATGAGAAATCAAAGGAGGAGCTACGAAGGCATCACCAGGCAGAACTTGCCCGCCAGAAAAATGAAGAAACAGCCCGTAGACTTGCTGGTGATGGACATGGATCAGGTAATAATCGTTCCGCTGCAAAGTCTTCATCCGATTTAGTGGCCTACAAGAATGTAAATGATCTCAATCCTAAAAGAGATCTGATGATTCAAGTTGACCAGAATAATGAAGCTGTTCTTTTGCCTATATATGGGAGCATGGTCCCCTTTCATGTTGCCACCATAAGGACAGTTAGTGTCCACGCGGAGTCAGCCAACACTAATCAGGCTTGTTATATCAGAATCATCTTCAATGTTCCTGGGACTCCTTTTAGTCCTCATGATACAAACTCACTGAAAAACTTGGGTTCTATATATTTAAAGGAAGTTTCATTTCGCTCCAAGGACACAAGGCACATAAATGAAGTTACACAGGTGATCAAAAACCTTCGGAAGCGAGTTCAGTCCAGGGAGAGTGAGAGAGCTGAGAGGGCTACACTTGTTACTCAGGAGAAACTCCAACTAGCTGGTAACAAATTTAAGCCACTGAGATTGAATGACCTCTGGATTCGACCTGTGTTTGGTGGACGTGGCAGAAAGATTCCAGGTACTCTTGAAGCTCATGCAAATGGGTTTCGTTACTCTACCACCAGACAAGATGAGCGCGTGGATGTAATGTATGGAAATATTAAGCATGCTTTTTTCCAGCCAGCAGAGAATGAGATGATTACTCTCCTTCATTTTCATCTTCACAATCACATAATGGTGGGCAACAAGAAAACCAAAGACGTGCAATTCTATGTGGAGGTTATGGATGTAGTTCAGACCTTGGGAAGTAGTAAGAGATCTGCCTACGACCCAGATGAGATTGAAGAAGAGCAACGAGAGAGGGCTAGGAAGAACAAAGTCAACACTGAATTTCGGACCTTTGTGACTCGGGTACAGGATCTTTGGCAGCAGCCCCAGTTTGAAGGCCTTGAACTTATGTTTGATCAGCCTATGAGGGAGCTTGGTTTCCACGGTGTGCCTTATAAATCCTCAGCATATATCGTCCCTACTACAAATTGCCTGGTTGAACTGATTGAAACTCCTTTTCTTGTTGTCACTCTTGGCGAGATTGAAATTGTGAATCTGGAAAGGGTTGGGCTTGGACAGAAGAATTTTGACCTGGCAATTGTGTTCAAGGATTTTAAAAAAGATGTTCTTCGGATTGATTCGATCCCATCCACAGCACTTGAAGGTCTCAAGGAATGGCTGGACGACACAGAGATCAAGTACTATGAGAGCAGGATGAATCTGTCGTGGAAACCTATACTGAAGACAATTACTGAGGATCCGCAGAGCTTCCTTGATAATGGAGGTTGGGAGTTTTTGAATTTGGAGGGAACGGATTCAGACTCTGAACAGTCTCAGGAGTCAGACCAGGGTTATGAACCATCTGATATGGAATCCGAATCAGAATCGGAGGATGAATCTTCTGATAGTGCGTCACTTGTGGAGTCTGAGGATGATGAGGAGGAAGATTCAGAAGAAGTCTCGGAGGATGAGGAGGGGAAGACATGGGAAGAGTTGGAGAGGGAAGCAAGCAATGCAGACAGGGAGAAAGGCAACGAGTCGGACAGCGAGGAGGACAGGAAGAGAAGGAAGATGAAAGCTTTTGGCAAGGCTCGAGCCCCGCCTGCTGGTAGCATCCCAAAGCGGTCCAAGCTGAGGAGATAG
Protein Sequence
- >RchiOBHm_Chr3g0458161
MADNRNGNSKPTKAAGAGNNPYSIDLNVFSQRLKSLYSHWNEQPELWDSSDVIAIATPPQSDEIRYLKSSALQMWLVGYDVPDTIMVFMKKEIHFLGSQKKVSFFQGVKKSAKDAVGVDVVTHVKAKSDDGSALMDTILGVIRAQPKADGRDTVIVGRIAREDPEGNLLKLWFEKLKSATVQLGDVTNGLSDLFAVKEKEELGNVKKAAYLNTLVMQKMVAKLESVIDDEKKVTHSSLMDETEKLILEPSKVGLKLNPQNVDICYPPIFQSGGKYDLRPGAASNDELLYYDSASVIICAVGSRYHNYCSNAARTFLIDANPLQSKAYEVLLKAHAAAISELKPDNKASAAYLAALAVVEKDAPELLPNLTKSTGTGIGIEFRESGLNLNAKNDRVVKAGMVFNVSLGFHNLQSGISDPKHQNFSLLLADTVVVNNDKPEVLTVKVSKAVKDVAYSFNEVEEEKPEKGKGPANGTEALISKTNLRSDNNEKSKEELRRHHQAELARQKNEETARRLAGDGHGSGNNRSAAKSSSDLVAYKNVNDLNPKRDLMIQVDQNNEAVLLPIYGSMVPFHVATIRTVSVHAESANTNQACYIRIIFNVPGTPFSPHDTNSLKNLGSIYLKEVSFRSKDTRHINEVTQVIKNLRKRVQSRESERAERATLVTQEKLQLAGNKFKPLRLNDLWIRPVFGGRGRKIPGTLEAHANGFRYSTTRQDERVDVMYGNIKHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGSSKRSAYDPDEIEEEQRERARKNKVNTEFRTFVTRVQDLWQQPQFEGLELMFDQPMRELGFHGVPYKSSAYIVPTTNCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDLAIVFKDFKKDVLRIDSIPSTALEGLKEWLDDTEIKYYESRMNLSWKPILKTITEDPQSFLDNGGWEFLNLEGTDSDSEQSQESDQGYEPSDMESESESEDESSDSASLVESEDDEEEDSEEVSEDEEGKTWEELEREASNADREKGNESDSEEDRKRRKMKAFGKARAPPAGSIPKRSKLRR