Information report for RchiOBHm_Chr1g0361301
Gene Details
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Functional Annotation
- LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1;MYB transcription factor MYB114, LATE ELONGATED HYPOCOTYL 2 gene b
Homologous
- Citrus sinensis: orange1.1g004262m, orange1.1g004260m, orange1.1g004258m, orange1.1g004257m, orange1.1g004251m, orange1.1g004250m
- Juglans regia: WALNUT_00014989-RA, Jr12_06150, Jr12_06140
- Populus trichocarpa: Potri.014G106800.9, Potri.014G106800.8, Potri.014G106800.7, Potri.014G106800.5
- Prunus avium: Pav_sc0001046.1_g470.1.mk
- Prunus mume: XP_016652252.1, XP_016652251.1
- Prunus persica: Prupe.2G200400.1.p, PRUPE_2G200400
- Ricinus communis: 30076.m004464
- Vitis vinifera: VIT_15s0048g02410
- Ziziphus jujuba: XP_015888949.1
Gene Resources
- Pfam: PF00249
- UniProt: A0A2P6SIW1
- EMBL: PDCK01000039
- AlphaFoldDB: A0A2P6SIW1
- OMA: SHYQMDR
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017884 , IPR017930
- PANTHER: PTHR12802 , PTHR12802:SF174
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51293 , PS51294
- Gene3D: 1.10.10.60
- OrthoDB: A0A2P6SIW1
- SMR: A0A2P6SIW1
- CDD: cd00167
- STRING: 74649.A0A2P6SIW1
Sequences
CDS Sequence
- >RchiOBHm_Chr1g0361301
ATGGACAATTTCTCATCTGGGGAAGATTTGATCGTTAAGGCAAGAAAGCCATATACTATTACCAAGCAGCGAGAGCGGTGGACTGAGGAGGAGCATAATAGGTTTCTTGAAGCCTTGAAGCTCTACGGGCGAGCATGGCAGCGCATTGAAGAACATATAGGAACAAAGACTGCTGTGCAGATCCGAAGTCATGCACAGAAGTTCTTTTCAAAGCTGGAGAAGGAGGCAGGCAGTAAAGGTGTTCCTGTAGGACAATCAATTGACATAGATATTCCGCCTCCACGCCCTAAAAGGAAACCAAGCAATCCTTATCCTCGGAAGTCTAGTGAAGCTGCTCCAACATGGTCCACGTCGCATGTCGGAGCAAAGGATGGAAAACTTGTGTCATCAGCTTCTTCTTCACATTGTAAACAAGCAGTGGACTTGGAGAAAGGACCACTCGATGAGAGATCCAGTGGAGAAGAAAAGCTAAGTTATGGAAAAGAAAACAAAGATGAAAGTTGCTCAGAAGTCTTCACCTTACTCTCAGAGTCTCACTGCTCCTCTGTGTCTTCTGCAAACAAAAGTTCCAAACCTGCACAGGCGGTACTCAGAAATGCTTGCACTTTTAGAGAGTATGTGCCTTCAGTGAAAAAGGTAATCCCTCGAGATGGCAATGAATCTTATGTCACTATTGAACTTAAAGGAAATGAGAATTTGAAGAAAACTGATGCCAAAAAGATAGTTCAAGATAATGCCACAAGTGAAGCCTCAAAGTTGGAGAACACTAATGCTTTTAAGTTGGTTCAAGGTGAGAAAGCAGATGATTTGAATTGTTCATTGCCAACAGATGGGATGCGAAGTACTCCGACCTGCCCGAGGAACGTTCCTATACACATACTGGATGGGAGCGTAGGAGAATGTAATCAAACTACAACCCCAGATTTGTCATTTTCATTCCAGGATTCTGTATTTCATCCTATGGGAAAGATTCGTGTACAGCCTAACCTGTTTACAAATCCAGCTGCATCTACTACTACTACTGAACATGAAAGTAATGTATCAAGATCTTGTATTGACCAATCATTTCCAGCTATTCCACCTCCATTTACCCCATTCCACCACAATCAAGAGGACTACCACTCATCTCTTTCCTCCACATTTTCAAGTCTTATTGTGTCTTCTCTGCTACAAAACCCTGCAGCCCATGCTGCGGCTAGCTTTGCAGCGACATTCTGGCCTTACACGAATGCAGAGAACAAGGAATGTTCTCCAGCATGCTCTGCCGGAGGTTTTCCATCTAGCCAAATGAACTCCCCTCCAAATATGGCAGCAATTGCTGCTGCGACTGTAGCTGCAGCAACTGCATGGTGGGCAGCCCATGGATTGCTCCCCTTGTGCGCTCCTCTTCAAACTAGCTTTAGCTGTCCTGTGCCCGTGCCCATGACTGGAGTTTCATCAATGGACAATGATCAAGCTCCTGCAGCCGAGACAAAGAAAGGACAGGATTCTCTTCAAGTTCCTTGCTTGCAGGATCAACTGCAGGACCCAGAACAGTCAGAAGCTGTGCAAGAACAACATTCACCTCCAAAATCACCAACCACAACCTCATCAGACTCTGAAAATGGAGGTGCAAAGCCTGATATTGGATCAAAAGCTGATGATAATGAGGACCTAGCAACAACTGAAGTTCAAGATTTGAACAAAGCAAAGAGCAAAAAACAGGTGGACCGTTCTTCATGTGGTTCAAACACAACTTCCTGCAGCGAAGTAGAGACGGATGCATTAGAGAAGCAAGAAAAAGGTGAGGAAGAACTAAAAGAACCTGACATAAACCCAGCTTCTGAGTCTAGTTATCGCCGCACTAGAAGTATAAGCAACATGAGTGATTCTTGGAAAGAGAGACACATGAATGATTCATGGAAAGAAGTCTCTGAAGAGGGGCGAATGGCTTTTCAAGCATTATTCTCAAGAGAGGTATTGCCCCAGAGTTTTTCACCTCCACCTGACCTGAATGATAAGGGGCATCAGGACACTATAGAAGGACAGCAAAATAGTGGTGAGAAAGACGGAAGATCTCTAATGTTAGACCTGAACAGCAAGGCCTGGGCACCATTTTGTCACCCAGAAGTGGAGAAAATTGCATCACCACCAGGAGGGCTCAACGGTGCAGGGGGGCTGTTGACATTAGGCCTGGGATATGGAAAGCTAAAGGCTCGTCGAACAGGATTCAAGCCTTACAAAAGGTGCTCTGTAGAGGCCAATGAGAACAGGGTGGCAAATGCCAGCAGCCATTGTGAAGAGAAAGGTCCCAAGAGGCTTCGCTTGGAAGGGGAAGCTTCAACTTGA
Protein Sequence
- >RchiOBHm_Chr1g0361301
MDNFSSGEDLIVKARKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEAGSKGVPVGQSIDIDIPPPRPKRKPSNPYPRKSSEAAPTWSTSHVGAKDGKLVSSASSSHCKQAVDLEKGPLDERSSGEEKLSYGKENKDESCSEVFTLLSESHCSSVSSANKSSKPAQAVLRNACTFREYVPSVKKVIPRDGNESYVTIELKGNENLKKTDAKKIVQDNATSEASKLENTNAFKLVQGEKADDLNCSLPTDGMRSTPTCPRNVPIHILDGSVGECNQTTTPDLSFSFQDSVFHPMGKIRVQPNLFTNPAASTTTTEHESNVSRSCIDQSFPAIPPPFTPFHHNQEDYHSSLSSTFSSLIVSSLLQNPAAHAAASFAATFWPYTNAENKECSPACSAGGFPSSQMNSPPNMAAIAAATVAAATAWWAAHGLLPLCAPLQTSFSCPVPVPMTGVSSMDNDQAPAAETKKGQDSLQVPCLQDQLQDPEQSEAVQEQHSPPKSPTTTSSDSENGGAKPDIGSKADDNEDLATTEVQDLNKAKSKKQVDRSSCGSNTTSCSEVETDALEKQEKGEEELKEPDINPASESSYRRTRSISNMSDSWKERHMNDSWKEVSEEGRMAFQALFSREVLPQSFSPPPDLNDKGHQDTIEGQQNSGEKDGRSLMLDLNSKAWAPFCHPEVEKIASPPGGLNGAGGLLTLGLGYGKLKARRTGFKPYKRCSVEANENRVANASSHCEEKGPKRLRLEGEAST