Information report for RchiOBHm_Chr1g0346311
Gene Details
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Functional Annotation
- The gene encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B.
Homologous
- Actinidia chinensis: CEY00_Acc08996, CEY00_Acc00443
- Glycine max: Glyma.11G175700, Glyma.01G074000
- Gossypium hirsutum: Gohir.A08G029900, Gohir.D08G040700, Gohir.A11G077100, Gohir.D08G159100, Gohir.A08G137833
- Juglans regia: Jr05_03100, Jr05_03090
- Manihot esculenta: MANES_01G271200, MANES_05G051900
- Populus trichocarpa: POPTR_002G141300v3, POPTR_014G055800v3
- Prunus avium: Pav_sc0002441.1_g040.1.mk
- Prunus persica: PRUPE_2G122900
- Vitis vinifera: VIT_15s0021g02140
Gene Resources
- Pfam: PF00097 PF12678 PF12718 PF12861 PF13639 PF13920 PF13923 PF14447 PF14634 PF14835 PF17121
- UniProt: A0A2P6SEZ3
- EMBL: PDCK01000039
- AlphaFoldDB: A0A2P6SEZ3
- OMA: THIEIMT
- InterPro: IPR001841 , IPR013083 , IPR013956 , IPR017907 , IPR018957
- PANTHER: PTHR23163 , PTHR23163:SF0
- SUPFAM: SSF57850
- PROSITE: PS00518 , PS50089
- Gene3D: 3.30.40.10
- OrthoDB: A0A2P6SEZ3
- CDD: cd16499
- STRING: 74649.A0A2P6SEZ3
Sequences
CDS Sequence
- >RchiOBHm_Chr1g0346311
ATGGGGAGCACCGGAGAGCATGACCGGAAACGGCGTCACTTTAGCTCCATATCGTCACCCACGGCTGCTGCTGCTAAGAAGCAGCCGTTTTTGCCTATTTCCGAGGATAAAAAGCTTGACATTGCTGTCCTTCAATATCAAAATCAAAAGCTATCACAGAAATTAGAGACTCAGAAGGTTGAGTACTCTGCTCTTCAGAATGAATTGTCTCAATTGGAGAAGAAACAACTGCCATATGATCCCACACTATCAGTGGTTAATAAGTCTTGGAAAGAGTTGGTCAAAGACTTGGAGTCCTGTTCTATCCGTTCAAGAAAGTCAACCTGTCAGCAAGATATTAAAGACAACTCCGTCGTGCGTGATGGGGCTCCATCTACCTTGCATGATGCTTTTTTAAGCCGCCTTGCACAAGCTGGTGCAACTGAAAGTTCATGTACATATAACAATTGTAATAAGATGGAAGAAGATAGAGGAACTACCTCTGAAGATACTCAGAATATATTAGGTAATATAGTAGCTGCAATTGACAACGTGTGGAATCTGAAGGATGCATTGCATGATGCACTGTTGAAAGAGCTTCCAGAAGATGGCTTGTCTAGGCAGAGGGCATCCAATGATTCAAAAATGGAAGTTAAGAACTTGAGATTGGCATTTTCTGGTATTCTTCTGAAGCACAGAGGTCTGGCAAGGGAACTGCAGAACCGCTGGGACATTGAAGCAAAGAATAAAGCGGAGATTAAACGTCTGAAAGGGGAGTTGGAAACCACTCTTGGTGAATTGGAAGAGAATAATCGTCAACTAGCAAGTCTAAAAGCAGAGAGAGATTCTACAAAAGGGGCAACTTTCCCTGTCTTAAATTTTCTGAACAAGCCTGTTGATAGGGCCAGAGATAAGCAAAAGGATCTGCAAGATATGGAGTCTACTCTCAAAGAGCTCACGGACCAAGCTTCTTGTCGACTAATGGAAATAAAAAGCCTTCATGAAGAACGGATAAAAATATTACAGCAGTTATCTAGTTTGCAGAACATGATGAGGAATGCAAAGTGTCTTTCCTCATCCAAAGCCTATCTCTTGGTCAAAGATCAAATAGAAAAGTCGAAATCGGAAGTTTTTGAGTGCCAAACCATCTTTGAGAAACTACAGGTTGAGAAGGATAATCTTGTGTGGAGGGAGAGGGAACTTAATGTTAAAAATGATGTAGTTGATGTTTTGCGGAGATCAGCTGCAGTTGTTGATTCTAGAATTACTGATCTGGGTATGGAGATACAGAAACAGATTGATGAAAGGAAAAGGATTGAAGCGAAGCTGGAAGAGGCGTCAAGAGAACCAGGAAGAAAAGAAGTACTTGAAGAATTTAAGGCCTTGGTTTCTTCATTTCCTGAGCAAATGGGTGCCATGCAAGGTCAATTACGTAAATACAAAGAGGCTGCTTCTGATTTTCATTCTTTGCAGGCTGATGTGCAGTCCCTTTCCAGCATTCTTGATAGGAAGGTGAAAGAGTGTGAGACTTTTTCTGCAAGATCCTCTGACCAACTCGCTGAGATACGGCAGTTGAAAGCTGTGGTCCAAGATATAAAGGAGACTGAATCAGAGTTAAAGCTGTTTTTGGAAATGTATAGACATGAATTGAGTGATCCAAGGGATGTCATGGAAGCTAGAGATTTGGAATGCAAGGCATGGGCTCATGTTGAAAGTTTGAAGTCATCTCTTGATGAACACAATTTAGAATTACGAGTTAAGATAGCAAATGAAGCTGAGGCCACTTCTCAACAAAGGCTTGCTGCTGTAGAAGCTGAGATTGCTGACCTCAGACAGAGGCTTGAAGCTTCCAAAAGGAATAAGTCGAGACTTGCTGACGTTTTGAAATCCAAGACTGAAGAAAATGAGGCCTACTTGGCTGAAATTGAGACAATTGGACAAGCGTATGATGATATGCAAACTCAAAACCAGCATCTACTGCAGCAAATTACTGAGCGAGATGACTATAACATTAAGCTTGTTTTAGAGGGCATGAGGGCAAGACAGACACAGAATGCCGTACTCATGGACAAACGCAAGATGGAGAGGGAGATTCAACAAGGCAATGCATCTCTTAATTTCTATGAGATGAAAGCTACTCGGATTGAAGATCAGTTAAAACTATGCTCAGATCAGATTCAAAGACTAGCAGAACATAAGTTTCAAGGTGCAGTTCAACTGGAAAATACCCAGAAGAGGTTAATGGATGTGAGAAGGTCATCACAGCAAGCACAGGATTCTCTAGAGGAATCACAGTCTAAAGTTGTTAAGGGTCGATTGACTCTGTCCGAGATGCAGATAGATCTAGAGAAAGAAAGGCTTAACAAGAAGAGAATAGAGGAGGAATTAGAAGTTTTGAAAAGAAAAGCTGGTCGGCTTCAAGCACAGACAGAGGGTTCGTCAATTGTTGAAAAACTTCAACAGGAGCTAGGAGAATACCGGGAGATATTGAAATGTGATATCTGCCTTGACAGGACAAAACAGGTTGTCATTACAAAATGCTATCACTTGTTCTGCAATCCCTGTGTGCAAAAAGTAGTTGAATCTCGCCAGAGGAAATGTCCAAAATGTTCCATTAGTTTTGGGCCTAATGACATAAAATCTGTGTACATCTAA
Protein Sequence
- >RchiOBHm_Chr1g0346311
MGSTGEHDRKRRHFSSISSPTAAAAKKQPFLPISEDKKLDIAVLQYQNQKLSQKLETQKVEYSALQNELSQLEKKQLPYDPTLSVVNKSWKELVKDLESCSIRSRKSTCQQDIKDNSVVRDGAPSTLHDAFLSRLAQAGATESSCTYNNCNKMEEDRGTTSEDTQNILGNIVAAIDNVWNLKDALHDALLKELPEDGLSRQRASNDSKMEVKNLRLAFSGILLKHRGLARELQNRWDIEAKNKAEIKRLKGELETTLGELEENNRQLASLKAERDSTKGATFPVLNFLNKPVDRARDKQKDLQDMESTLKELTDQASCRLMEIKSLHEERIKILQQLSSLQNMMRNAKCLSSSKAYLLVKDQIEKSKSEVFECQTIFEKLQVEKDNLVWRERELNVKNDVVDVLRRSAAVVDSRITDLGMEIQKQIDERKRIEAKLEEASREPGRKEVLEEFKALVSSFPEQMGAMQGQLRKYKEAASDFHSLQADVQSLSSILDRKVKECETFSARSSDQLAEIRQLKAVVQDIKETESELKLFLEMYRHELSDPRDVMEARDLECKAWAHVESLKSSLDEHNLELRVKIANEAEATSQQRLAAVEAEIADLRQRLEASKRNKSRLADVLKSKTEENEAYLAEIETIGQAYDDMQTQNQHLLQQITERDDYNIKLVLEGMRARQTQNAVLMDKRKMEREIQQGNASLNFYEMKATRIEDQLKLCSDQIQRLAEHKFQGAVQLENTQKRLMDVRRSSQQAQDSLEESQSKVVKGRLTLSEMQIDLEKERLNKKRIEEELEVLKRKAGRLQAQTEGSSIVEKLQQELGEYREILKCDICLDRTKQVVITKCYHLFCNPCVQKVVESRQRKCPKCSISFGPNDIKSVYI