Information report for Pp3c9_21250
Gene Details
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Functional Annotation
- Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top half of the embryo during the transition stage of embryogenesis. It can also interact with IAA12 through the EAR domain of IAA12 and the CTLH domain of TPL. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background.
Homologous
- Actinidia chinensis: CEY00_Acc22153
- Citrullus lanatus: Cla97C07G139070
- Glycine max: Glyma.08G214600
- Gossypium hirsutum: Gohir.D05G122800
- Hordeum vulgare: HORVU7Hr1G066930
- Juglans regia: Jr12_20240, Jr12_20250, Jr07_31810, Jr07_31820
- Manihot esculenta: MANES_04G108600, MANES_09G124300
- Musa acuminata: Ma04_g09920
- Oryza sativa: OsTPL;ASP1
- Prunus persica: PRUPE_3G093100
- Rosa chinensis: RchiOBHm_Chr2g0134371
- Sesamum indicum: SIN_1021914
- Vitis vinifera: VIT_16s0039g02410
Gene Resources
- Pfam: PF00400
- UniProt: A0A7I4EJK1
- RefSeq: XP_024384332.1
- EMBL: ABEU02000009
- AlphaFoldDB: A0A7I4EJK1
- OMA: FATIGAH
- InterPro: IPR001680 , IPR006594 , IPR006595 , IPR015943 , IPR019775 , IPR027728 , IPR036322 , IPR048419 , IPR054080 , IPR054532
- PANTHER: PTHR44083 , PTHR44083:SF45
- SUPFAM: SSF50978
- PROSITE: PS00678 , PS50082 , PS50294 , PS50896 , PS50897
- Gene3D: 2.130.10.10
- OrthoDB: A0A7I4EJK1
Sequences
CDS Sequence
- >Pp3c9_21250
ATGTCGTCCTTGAGTAGGGAACTTGTGTTCCTGATCTTGCAGTTCCTTGATGAAGAAAAGTTCAAGGAAACAGTGCACAAGTTGGAGCAAGAATCAGGATTCTTCTTCAATATGAAGTACTTTGAAGACCAAGTTCAAGGTGGTGAGTGGGAGGAGGTGGAACGATATTTATCTGGGTTCACTAAGGTGGATGACAACCGCTATTCAATGAAAATCTTCTTTGAGATACGGAAACAAAAGTACCTGGAAGCTCTGGACAAGCAAGATCGGGCGAAGGCTGTTGACATACTCGTGAAAGATTTGAAGGTTTTCTCTTCTTTCAACGAGGAGCTCTACAAGGAGATCACCCAGCTTCTTACTCTAGAGAATTTCAGGGAAAATGAGCAGCTGTCAAAGTACGGAGACACCAAATCTGCTAGAAACATTATGCTTCTAGAACTCAAAAAACTAATAGAAGCCAATCCACTCTTTCGAGACAAGTTGGCTTTTCCATCATTAAAAGCATCTCGCCTGCGCACCCTTATTAATCAGAGTCTCAATTGGCAGCATCAGCTTTGCAAAAACCCAAGGCCGAATCCTGACATTAAGACACTCTTCATTGATCACACATGCGGGCCTCCTAATGGGGCTCGAGCCCCACCGCCTGCTAATAATCCCTTGGTGGGTGGCATCCCGAAGCAGGGTGCCTTTCCTCTTGGTACTCACAGTCCATTCCAACCCGCACCGCCCTCCGCAAGTTCTTTAGCGGGATGGATGGCAAACCCCAATCCACCAGCACCACATGCTCCAGTTGCGAATGGACCAGCTGCTCTGACTGCTCCCCCTAATTCAGCTGCATTGTTGAAGCGGCCTCGTACCCCACCAAGCACTACTCCGACTGTGGATTATCAGTCAGCTGATTCCGAGCACCTCATGAAGAGAGCCAGGCCTGGCGTTCAATCAGTTGATGAGGTCAAGACAGTGTTTGTTCCTGGTGGTACTAGTCATCCTCAGAACAATGTGTCACCTGACGACTTGCCAAAGAGCGTAGCCCGATCCCTCAATCAAGGTTCTTGCGTTATGAGTATGGATTTTCATCCAATCCAGCAAAGTGTTCTTCTTGTGGGTACAAACGTTGGAGATATTGGAATTTGGGAAGTGGGTTCGAGGGAGAAGCTTGCCCAACGAACATTTAAAGTCTGGGACATTACTGCTGCGTCCATGCCCATGCAGGCTGCATTGGTCAAAGATCCAGCTGTATCAGTCAACAGAACGGTTTGGAATCCAGATGGCACATTACTGGGTGTTGCGTTTTCTAAACATATCGTACACATCTATGCTTACAATGGTGGCAGTGATTTGCGGCAACATTTGGAGATTGACGCTCATGTAGGCGGTGTTAACGATTTGGCTTTCTCTCATCCAAACAAACAATTATGTGTCATTACTTGCGGAGATGATAAAACTATCAAGGTTTGGGATGCTGCAACAGGACGTAAGCAATACACTTTTGAAGGACATGAAGCACCTGTGTACTCTGTTTGTCCTCATCATAAAGAGAGTATTCAGTTTATATTCTCAACAGCTATTGATGGCAAGATAAAAGCTTGGCTCTATGATCTCCTTGGATCTAGAGTTGACTACGATGCACCTGGTCATTGGTGCACTACAATGGCTTACAGTGCTGACGGCACTAGACTCTTTTCTTGTGGAACTAGCAAAGATGGAGAATCTTATCTGGTGGAATGGAATGAGAGCGAAGGCGCAATTAAGCGGACATACTCAGGTTTCCGCAAGCGATCCGCCGGCGTTGTGCAGTTTGATACGACCCGAAATCGTTTCCTAGCTGCTGGTGACGAATTTCTGATCAAGTTCTGGGACATGGATAATACGAACTTGCTTACTACAATTGATGCAGAGGGTGGCTTGCCGGCAAGTCCACGTCTCAGGTTCAACAAAGACGGCTCTTTGCTTGCTGTCACTACCTCGGATAATGGCATCAAGATTTTGGCTAATCGCGATGGGATGCAGATGCTCCGTGCGTTGGAAGCTCGTGCGTATGATACTAATCGAGTTCCTCCGGAACCTGCTGTTTCTAAGCCGCCAGTCGGAAATGCACTTGGGGTCGTGAGCACCCCAGGTGGCGGCGGTGGGGAACGACCGAATTCTTCGTCGATGGCTGGGTCCGTTATGGATGGTCCAACCCTAAACATGGGGGGATCAAGGGTCCGACCACGAGAAAGGGTCGGCAATGACCATTCTGGTATGGAAGGAGGGCGCACACCTGAGACGAAACCAAGAATACCTGACGAAATCCCAGACCGAAGCAAGAGCTGGAAGCTGACAGAAATAACTGAGCAGAATCAATGCCGGACAATAAGATTGCCCGACAGCCTGCCTCCAAACAAGGTTGCAAGGCTTATTTACACGAATGCAGGAGTTGCTCTGCTGGCACTAGCTTCGAATGCTGTGCACAAGCTTTGGAAATGGCAACGAAACGAGCGGAATATAAATGGAAAGGCTACTGCAAGCGTTTCCCCACAGTTGTGGCAACCTGCCAGTGGTATTTTGATGACCAATGACATCAGCGAAACCAACCCTGAAGATGCTGTGCCTTGCATAGCGCTATCGAAGAATGATTCTTATGTGATGTCCGCCTCGGGAGGAAAAGTCTCTTTGTTCAATATGATGACATTCAAGGTCATGACGACATTCATGCCGCCACCTCCAGCAGCTACTTTTCTTGCGTTCCATCCCCAAGACAACAACATCATTGCCATAGGAATGGAGGATTCAACAATACAGATTTATAATGTTCGTGTAGATGAGGTAAAGAGCAAGTTGAAGGGCCATCAGAAGAGAATCACTGGCTTGGCGTTCTCCAATACCCTCAATGTGCTTGTATCATCAGGGGCGGATGCTCAGTTGTGTATGTGGGGAACAGATGGCTGGGAGAAGCGAAAGTCTAAGTTTGTGCAAGTTCAGCCTGGTGGGAGATCACCATCTATGGGAGACACCCGCGTTCAATTTCACAACGATCAAGTTCGACTTCTTGTTGTCCACGAGTCACAGTTGGCTGTGTACGAGGCCGCAAAATTAGATCGTCTTCGCCAGTGGGTCCCTCAAAACCCCTTCCCAGCAGCTATTTCGAATGCCACCTACTCATGCGACAGTCAGCTTATTTATGCGGGCTTCGTCGATGGCTCTGTTGGCGTCTTCGATGCTGAAAGCTTACGACCACGATGCAGGCTTGCCCCATCTGTGCACATACCTCCGGGAGTGAGTGGATCGACAGTTTACCCCTTAGTGATTGCTGCGCATCCCGCAGAGCCAAACCAATTTGCATTGGGCTTGAGTGATGGAGGTGTACAAGTAATAGAGCCACTAGAATCTGAGGGGAAATGGGGGACGGGGCCCCCTGCAGACAATGGAACAGCTAGTGGTGTACCATCTGGTCCTGCTTCTGGCAACCAAGGATCAGACCAAACCCCAAGATGA
Protein Sequence
- >Pp3c9_21250
MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDQVQGGEWEEVERYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKQDRAKAVDILVKDLKVFSSFNEELYKEITQLLTLENFRENEQLSKYGDTKSARNIMLLELKKLIEANPLFRDKLAFPSLKASRLRTLINQSLNWQHQLCKNPRPNPDIKTLFIDHTCGPPNGARAPPPANNPLVGGIPKQGAFPLGTHSPFQPAPPSASSLAGWMANPNPPAPHAPVANGPAALTAPPNSAALLKRPRTPPSTTPTVDYQSADSEHLMKRARPGVQSVDEVKTVFVPGGTSHPQNNVSPDDLPKSVARSLNQGSCVMSMDFHPIQQSVLLVGTNVGDIGIWEVGSREKLAQRTFKVWDITAASMPMQAALVKDPAVSVNRTVWNPDGTLLGVAFSKHIVHIYAYNGGSDLRQHLEIDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGRKQYTFEGHEAPVYSVCPHHKESIQFIFSTAIDGKIKAWLYDLLGSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKDGESYLVEWNESEGAIKRTYSGFRKRSAGVVQFDTTRNRFLAAGDEFLIKFWDMDNTNLLTTIDAEGGLPASPRLRFNKDGSLLAVTTSDNGIKILANRDGMQMLRALEARAYDTNRVPPEPAVSKPPVGNALGVVSTPGGGGGERPNSSSMAGSVMDGPTLNMGGSRVRPRERVGNDHSGMEGGRTPETKPRIPDEIPDRSKSWKLTEITEQNQCRTIRLPDSLPPNKVARLIYTNAGVALLALASNAVHKLWKWQRNERNINGKATASVSPQLWQPASGILMTNDISETNPEDAVPCIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMPPPPAATFLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKSKLKGHQKRITGLAFSNTLNVLVSSGADAQLCMWGTDGWEKRKSKFVQVQPGGRSPSMGDTRVQFHNDQVRLLVVHESQLAVYEAAKLDRLRQWVPQNPFPAAISNATYSCDSQLIYAGFVDGSVGVFDAESLRPRCRLAPSVHIPPGVSGSTVYPLVIAAHPAEPNQFALGLSDGGVQVIEPLESEGKWGTGPPADNGTASGVPSGPASGNQGSDQTPR