Information report for Pp3c6_18600
Gene Details
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Functional Annotation
- Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007; Kim et al 2008). To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 (other names: ensalada-1, ens-1).
Homologous
- Actinidia chinensis: CEY00_Acc21565
- Capsicum annuum: T459_24617
- Citrullus lanatus: Cla97C03G063210
- Daucus carota: DCAR_009654
- Gossypium hirsutum: Gohir.D13G221000, Gohir.A13G217400
- Juglans regia: Jr14_18940
- Lactuca sativa: gene-LSAT_7X110720
- Populus trichocarpa: POPTR_009G049200v3
- Prunus persica: PRUPE_4G257300
- Rosa chinensis: RchiOBHm_Chr5g0051141
- Solanum lycopersicum: Solyc10g005530.3
- Vitis vinifera: VIT_06s0009g03810
Gene Resources
- Pfam: PF02854 PF09088 PF09090
- UniProt: A9RK96
- RefSeq: XP_001754521.1 , XP_024378875.1
- EMBL: ABEU02000006
- OMA: CAAEGLM
- InterPro: IPR003890 , IPR015172 , IPR015174 , IPR016024 , IPR027159
- PANTHER: PTHR12412 , PTHR12412:SF2
- SUPFAM: SSF48371
- Gene3D: 1.25.40.180
- OrthoDB: A9RK96
- eggNOG: KOG1104
- STRING: 3218.A9RK96
- HOGENOM: CLU_013207_0_0_1
Sequences
CDS Sequence
- >Pp3c6_18600
ATGAGTGCGAGTTGGCATTCGCTTCTGGTGCGAATTGGAGAACGGTGTCCAGAGTATGGAGGGCTGGCGGATGCCGAGGAGCATGTGGAAACCTGCTTTGGGTATCTCGCGAGGGACTTGTCGCACAACGAGAGTGAGATCCTGGCTCTGCTGATGCAATGTGTGGAGGAGCTGCCCCACAAAGATCCCTTGTATGGCGCCCTGGTGGGGCTTATCAATACCGAGGATAGAGAGTTTGTGGGTAAAGTCGTTAATCGGACGCACGCAGGGGTCCAGGAAGCGCTGGACACAGACAATTGTAACAAGCTCCGGATTCTCACCAGGTTTTTGACGGTACTGATGTGCAATAGCGTGGTGTCGCCCACGTCGCTCATTGAGCTGTATGAATCGTTGGTGTCCTCAGCCGCAACTACGGTAGATGAGGAGACCGGTAACCCCGCATGGCAGGCGCGTGCTGATTTTTACGTCTTTTGTATCCTTGCGTCTCTGCCATGGGGTGGTATTGAGCTTTCAGAGCGTGTCCCAGAGGAGCTAGAGCGTGTCCTCAACGGGATCGAGGCTTACTTGAATTTGCGGAAACCGGTGGTGTATAGCGCCCTCCAAGTGTTCGAGGAAAGCGAGAAGCTCGTAGAAGTTGGGGACGACACAGAGATGAAGCTCCCTGAGTCAGAGGACTATCTGGAGAATCTCTGGTCCAGCATCCAGGCGCTAATGGAAAATTCATGGAAAGTGGACAGCGTGCCGCGGCCGCACCTCTCATTTGAGTCACGCTTTGTGAACTCGCAGACTCATGATTTTGATCCAGTCCTAATTCCAGATAATCCTAAAGCTCCAGAGAATGCTACCGAGATTACATTGGGCCGTCAACGCCAAGAGGCGGAGCGCACATATCCTCGAAGAAACATGCGCCTGCGCATTTTTCCCTCCTCAAAAACAGATGAGAAGATCACACCGATTGATAGGTTTGTGGTAGAGGAGTACCTGCTTGATGTACTGTTCTATCTCAATGGATGCCGAAAGGAGTGTGCTGCGTACATGGTTGGCCTTCCAGTGCCGTTTCGATATGAATATATCATGGCAGAGACAGTCTTCTCGCAGCTTCTGTTGCTTCCAAAGCCACCATTCCGTCTCATTTATTACACAGTAGTGATGGTGGACCTGTGTAAGGCGCTTCCAGGCGCTTTTCCTGCTGTAGTGGCTGGTGCAGTTCGTGCTCTCTTCAAGAGGGTCGCAGAGATGGATGTGGAGTGTCGCATTCGCTTAGTGCAGTGGCTATCTCATCATCTCTCCAACTTCCAGTTTGTGTGGCCGTGGGAAGAATGGGCACACATTCTAGACCTTCCCAAATGGGCGCCAGAGCGGGTCTTTGCGAAGGAGGTGCTGGAGAAGGAGGTCAGGTTGGCGTATTGGGAAAAAGTAAAAGACAGTGTTACATCGACGCCAAGGCTCATGGAGCTTCTTCCTCCAAAAAACACGCCTGTATATGTGTATGCACCTGAGAACAGAGGATCGGTTCCTGAAGCAGAAACTACTCTCGCCACTGAATTCACGAATCTTGTGAGAGGCAAGAAAACTGTTCGTGAAATTCAAGTATGGATTGATGAGCGCATCTTACCGACACAAGGGCAGCAAGCCTCAATCCAAATTGTGGCGCAAACGTTGCTGTACATTGGGTCAAAAAGTTTCACCCACACTGTTACTGTCCTTGAGAAGTATGGTCAAATTTTTAGGAAGATAGCACCCGACCAGACCTCTCAGATTTTAATGATTGACACCGTTTCGCAGCTGTGGCGGAACTCAGCTCAGATGACAGCCATTGTCATCGACCGCATGATGGGGTATCGCATGGTCTCGAACTTATCCATTGTGGCCTGGGTATTTAGTCCTCAAAACGTGCAGCAGTTTCACACTTCCGATCAGGTTTGGGAAATTATTCGGAATGCAATCAATAAGACCAACAATCGTACAGTCGATTTGCGGAAGGAAATTGCAGCCGCCGAGAAGGCCCTGAAGCTGGCAACTGCAGGTACAGCCAAAGCTTATACCAAGTGGGAGGCAGCTGTGGCAGCTCTCAAGGCAGCTGAAGCCAAAAGTGAAGATAATCGTAATGCGTTGAGTGCCAAGGTTGACTGGGCTAAAACTGTAGCTGACAAAGCCCAAGACGAAGAAACTTCCGCACAGGACTCTCTGGAATCCAAAGAGGCTCTGCTTGCACGGGCACTACGAGAGCAGGAGGCTTTGTTTATGGCCGTCTATCAAAGCTTTGCAGATTTACTAACCGACCGCCTCTCAAAATCGGTTCCCGAGTCTCATGGAGCGCCGAATCCAATGGAAGATACGAAAGGGGAAGATGCAGATGCTCAAGCACCAGTTGCCATGGAACCTGATGAAGAAAATATCGAGGAAGACGGTACTAAGCAGAAAAATCAAGAAGACGTAATCAATGGTACTACAACCTTATTTGCTGATGCACAGGAGGAAGAGCAATGGCGCAAGTGTACCCTAGGCTATCTACGCGCCATTTCAAGACAGTACTGTGACGAGGTATGGTTGCTGATGGAGAAGCTTGACTCTACTGTCTTCACTGACAAGGTTCACCCTCTGGTGTTGTCGACAACTTACGCTGGACTTCAACGGTCATCATGA
Protein Sequence
- >Pp3c6_18600
MSASWHSLLVRIGERCPEYGGLADAEEHVETCFGYLARDLSHNESEILALLMQCVEELPHKDPLYGALVGLINTEDREFVGKVVNRTHAGVQEALDTDNCNKLRILTRFLTVLMCNSVVSPTSLIELYESLVSSAATTVDEETGNPAWQARADFYVFCILASLPWGGIELSERVPEELERVLNGIEAYLNLRKPVVYSALQVFEESEKLVEVGDDTEMKLPESEDYLENLWSSIQALMENSWKVDSVPRPHLSFESRFVNSQTHDFDPVLIPDNPKAPENATEITLGRQRQEAERTYPRRNMRLRIFPSSKTDEKITPIDRFVVEEYLLDVLFYLNGCRKECAAYMVGLPVPFRYEYIMAETVFSQLLLLPKPPFRLIYYTVVMVDLCKALPGAFPAVVAGAVRALFKRVAEMDVECRIRLVQWLSHHLSNFQFVWPWEEWAHILDLPKWAPERVFAKEVLEKEVRLAYWEKVKDSVTSTPRLMELLPPKNTPVYVYAPENRGSVPEAETTLATEFTNLVRGKKTVREIQVWIDERILPTQGQQASIQIVAQTLLYIGSKSFTHTVTVLEKYGQIFRKIAPDQTSQILMIDTVSQLWRNSAQMTAIVIDRMMGYRMVSNLSIVAWVFSPQNVQQFHTSDQVWEIIRNAINKTNNRTVDLRKEIAAAEKALKLATAGTAKAYTKWEAAVAALKAAEAKSEDNRNALSAKVDWAKTVADKAQDEETSAQDSLESKEALLARALREQEALFMAVYQSFADLLTDRLSKSVPESHGAPNPMEDTKGEDADAQAPVAMEPDEENIEEDGTKQKNQEDVINGTTTLFADAQEEEQWRKCTLGYLRAISRQYCDEVWLLMEKLDSTVFTDKVHPLVLSTTYAGLQRSS