Information report for Pp3c1_13190
Gene Details
|
|
Functional Annotation
- Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.
Homologous
- Actinidia chinensis: CEY00_Acc09715
- Arabidopsis thaliana: AT2G32950
- Gossypium hirsutum: Gohir.D11G159400, Gohir.A11G152500
- Manihot esculenta: MANES_12G068900
- Medicago truncatula: Medtr5g085250
- Musa acuminata: Ma03_g20940
- Nicotiana attenuata: A4A49_35805
- Populus trichocarpa: POPTR_014G159300v3
- Solanum lycopersicum: Solyc12g005950.2
Gene Resources
- Pfam: PF00400 PF00097
- UniProt: A9SK04
- RefSeq: XP_001766701.1
- EMBL: ABEU02000001
- AlphaFoldDB: A9SK04
- OMA: GDYICCG
- InterPro: IPR001680 , IPR001841 , IPR003613 , IPR013083 , IPR015943 , IPR017907 , IPR019775 , IPR036322 , IPR042755
- PANTHER: PTHR44080 , PTHR44080:SF1
- SUPFAM: SSF50978 , SSF57850
- PROSITE: PS00518 , PS00678 , PS50082 , PS50089 , PS50294
- Gene3D: 2.130.10.10 , 3.30.40.10
- OrthoDB: A9SK04
- CDD: cd16504
- eggNOG: KOG0297
- STRING: 3218.A9SK04
- HOGENOM: CLU_006994_2_1_1
Sequences
CDS Sequence
- >Pp3c1_13190
ATGGAGGGAGGGACATGTACTCAGGGCTCGATAGGACCTCACGTTCCGTCCGTGGCAGCTGTAAAGCAAGAACCACGGACGGGCTCCTGGTCGTCACAGGACAACAAGTGCGAGTTGGCAATGGCATCAAAGCCGGCACTGGACAAGGACTTTCTCTGCCCTATTTGCATACAAACAATGAAGGACGCCTTTTTGACTGCATGTGGACACAGCTTCTGTTACACGTGTATTATGACACATCTGAGCAACAAGAGTAATTGTCCTTGCTGTGGACAGTACCTTACCAATAATCAACTGTTCCCGAACTTTTTGTTAAACAAGTTGTTGAGAAAGGCCTCCGCCTCCCAGCTCGTCAGCAATGCATCTCCTGCTGAGCATTTACGACTTGCTCTTCAGCAGGGTGTAGACCTACCTGTAAAGGAGCTGGACTCACTCATGCACTTACTTTCTGATAAAAAACGGAAAGCTGAACAAGAAGAAGCCGAGGCCAATATGGAAATTTTACTTGAATTTTTACATCGGTCTCGACAACAAAAGAATGAAGAGCTTAATCTTTTGCAAGGAGATCTTCAGTTTCTCAAAGAAGACATTAGCACCGTCGAGAAGCAGCGGCAAGACCTGTTACACATTACGGAGAAAAATGCTCTAAAGATTCGCATGATCGCGGGTGGACCGTCATCCTCTAGGCCAGATACATTAGCTACAAATGAAAACACAAGTAAGGGTGAGGCAACTTCTCAGAGTCGAGGTGGTCAGTTTGGAGCGTCAGTACCATCCAACTTGCCCCCAGCTAGTCTTAAGAGAGATTACAGAGGACGTGTCACTTCTATTGGGACCTACAAGGAGATGATAGGAGGTGACGTATCATTGAGTAAAAGTCAATCAGAATTGAAAGCGCTGACACCTTCACCAGCGGTCTTGACGATGGCAAAGAAACGCCGTGTGGTGGCTCAGATCGAGGTTTTGCAAGAGGCCTATTTACAGCGCAGAAGGAAAGTAGCACAAGTTCATCGTCAGGAACAAAAAGTGCATGAGACAATCGTGCGCAAGGATGAAGAGGTCAACTCTGCCCGTGCCGACCTGTACAGTTCCGGTTTAGACGATTTCCAGTCCGTTCTGACTGCATTTACACGCTACAGCCGGTTGAGTGTAATTGCAGAGCTGCGGCACGGAGATTTGTTTCATTCCTCAAACATTGTTTCAAGCATTGAGTTTGGTAGGGATGATGAGTTGTTTGCAACAGCTGGAGTTTCAAGGAGGATTAAAATTTTTGAATTTGCAACGGTTGTCAATGAATTCGCTGGTGTACACTGTCCAGTAGTGGAAATGTCAACAAGGTCAAAATTGAGCTGCCTCAGCTGGAACAAATATATCAAATCACATATCGCCAGCAGTGATTATGAGGGGATTATTACTGTCTGGGACGTGAATAGGCGCCAGAGCATAACGGAGTATGAAGAGCATGAAAAGAGGGCATGGAGTGTGGATTTTTCACGAACTGATCCCACTATGTTAGTCTCGGGAAGCGATGATGGCAAGGTGAAGATATGGTGTACGAGGCAAGAGTCAAGCGTGATAAATATAGATATGAAAGCAAATATTTGCTGTGTGAAGTACAACCCAGGATCAAGCAACTATGTTGCAGTTGGTTCTGCGGATCATCATATTCATTATTTTGATGTGCGTAATTCTCATTTACCGTTGTATGTGTTCAATGGTCACCGAAAAGCTGTTTCGTATGTCAAATTCCTATCTCCAAACGAGTTAGCATCCGCATCTACTGATAGTACTTTGTGTCTTTGGGATGTCAAAGAGAACTGCCCGATAAGGACACTAAAAGGTCACACCAATGAAAAGAATTTTGTTGGACTTACTGTCAACAGTGAGTATATCGCCTGTGGCAGTGAAACAAACGAGGTGTTTGTGTATCACAAGGCTATGTCTAAACCAGCATCTTGGCACAGATTTGGATCTGAAGATGCGGGGGAGAGCGATGATGATACCTCCCACTTCATAAGTGCCGTGTGCTGGAAAAGCGAGAGTCCTACTATGCTTGCCGCCAATTCACAAGGCACAATCAAAGTCCTGGTCCTTGCTCCCTAA
Protein Sequence
- >Pp3c1_13190
MEGGTCTQGSIGPHVPSVAAVKQEPRTGSWSSQDNKCELAMASKPALDKDFLCPICIQTMKDAFLTACGHSFCYTCIMTHLSNKSNCPCCGQYLTNNQLFPNFLLNKLLRKASASQLVSNASPAEHLRLALQQGVDLPVKELDSLMHLLSDKKRKAEQEEAEANMEILLEFLHRSRQQKNEELNLLQGDLQFLKEDISTVEKQRQDLLHITEKNALKIRMIAGGPSSSRPDTLATNENTSKGEATSQSRGGQFGASVPSNLPPASLKRDYRGRVTSIGTYKEMIGGDVSLSKSQSELKALTPSPAVLTMAKKRRVVAQIEVLQEAYLQRRRKVAQVHRQEQKVHETIVRKDEEVNSARADLYSSGLDDFQSVLTAFTRYSRLSVIAELRHGDLFHSSNIVSSIEFGRDDELFATAGVSRRIKIFEFATVVNEFAGVHCPVVEMSTRSKLSCLSWNKYIKSHIASSDYEGIITVWDVNRRQSITEYEEHEKRAWSVDFSRTDPTMLVSGSDDGKVKIWCTRQESSVINIDMKANICCVKYNPGSSNYVAVGSADHHIHYFDVRNSHLPLYVFNGHRKAVSYVKFLSPNELASASTDSTLCLWDVKENCPIRTLKGHTNEKNFVGLTVNSEYIACGSETNEVFVYHKAMSKPASWHRFGSEDAGESDDDTSHFISAVCWKSESPTMLAANSQGTIKVLVLAP