Information report for Pp3c16_20280
Gene Details
|
|
Functional Annotation
- Red/far-red photoreceptor involved in the regulation of de-etiolation. Exists in two inter-convertible forms: Pr and Pfr (active). Involved in the light-promotion of seed germination and in the shade avoidance response. Promotes seedling etiolation in both the presence and absence of phytochrome A. Overexpression results in etiolation under far-red light. Accumulates in the nucleus after exposure to far red light. The phosphorylation state of the Ser-86 residue of the phytochrome B molecule alters dark reversion of the molecule.;Encodes photoreceptor phytochrome B
Homologous
- Actinidia chinensis: CEY00_Acc22895
- Citrullus lanatus: Cla97C05G088180
- Cucumis melo: MELO3C006717
- Cucumis sativus: SH3.1
- Juglans regia: Jr07_11560
- Manihot esculenta: MANES_03G205100
- Nicotiana attenuata: A4A49_26492
- Populus trichocarpa: POPTR_008G105200v3
- Sesamum indicum: SIN_1016170
- Solanum lycopersicum: Solyc01g059870.3
- Solanum tuberosum: PGSC0003DMG400024017
- Vitis vinifera: VIT_05s0077g00940
Gene Resources
- Pfam: PF01590 PF02518 PF00512 PF00989 PF08446 PF00360
- UniProt: A9TUP7
- RefSeq: XP_001782339.1
- EMBL: AB275305 , ABEU02000016
- AlphaFoldDB: A9TUP7
- OMA: ELACCKL
- InterPro: IPR000014 , IPR000700 , IPR001294 , IPR003018 , IPR003594 , IPR003661 , IPR005467 , IPR012129 , IPR013515 , IPR013516 , IPR013654 , IPR013767 , IPR016132 , IPR029016 , IPR035965 , IPR036890 , IPR043150 , IPR044767
- PANTHER: PTHR47876 , PTHR47876:SF3
- SUPFAM: SSF55781 , SSF55785 , SSF55874
- PROSITE: PS00245 , PS50046 , PS50109 , PS50112 , PS50113
- Gene3D: 3.30.450.20 , 3.30.450.270 , 3.30.450.40 , 3.30.565.10
- OrthoDB: A9TUP7
- CDD: cd00082 , cd00130 , cd16932
- eggNOG: ENOG502QRNS
- HOGENOM: CLU_010418_0_0_1
Sequences
CDS Sequence
- >Pp3c16_20280
ATGTCGACCCCCAAGTTGGCTTACTCGTCAGGGAGTTCTGTGAAGTCAAAGCATAGTGTCCGGGTGGCGCAAACTACGGCAGATGCCAAACTGCAGGCTGTGTACGAAGAATCTGGAGATTCAGGAGATTCATTTGATTACTCTAAATCAGTTCATGCGTCTAAATCCACGGGTGAGAATGTTTCTGCTCAAGCAGTTACCGCATACCTTCAGCGTATGCAAAGAGGGGGTCTGATGCAGACTTTCGGGTGTATGTTATGCGTGGAAGAGAGTAATTTTAGGGTTATTGCCTTCAGTGAGAATGCCCCAGAGATGCTTGATTTGATGCCACAAGCTGTGCCAAGTGTGGGCCAACAGGAAGTTCTGGGCATTGGAACGGATGCCAGAACTTTGTTCACCCCTTCCAGCGCCGCTGCCTTGGAGAAGTGCGCAGGAGCTGTGGATGTGACTATGCTGAACCCTATCTCAGTGCACTGTCGAAGCTCGGGGAAGCCGTTCTATGCAATTCTGCACCGTATCGATGTGGGACTGGTGATCGATTTTGAGCCAGTGCGGTCGAACGATGCCATTGTGTCCTCCGCTGGGGTGTTACAGTCGCATAAGTTGGCTGCAAAGGCGATTTCTCGGCTGCAGGCACTTCCTGGCGGAGATATTGGTCTGCTTTGTGATATTGTTGTTCAGGAAGTGCGCGAGCTTTCAGGCTACGATCGTGTTATGGCTTACAAATTCCACGAAGACGAACACGGTGAGGTCTTAGCAGAAATTCGGAGATCAGATTTAGAACCTTACTTGGGCTTACATTACCCAGCAACAGATATCCCACAGGCATCAAGATTCCTGTTTATGAAAAATAAAGTTCGAATGATTGGTGATTGCTTTGCTTCTCCTGTGAAAGTGATTCAGGACAAGGATTTGAGGCAGCCTATCAGTCTTGCGGGATCTACATTACGCGCTCCTCACGGTTGCCATGCGCAGTATATGGGTAATATGAACTCTATTGCTTCCTTAGTGATGGCTGTGATTGTGAATGACCCTGACGAGGATCCTAATGCACGCGGGGGTCAGCAAAGAGGGCGCAAGCTCTGGGGATTGGTAGTTTGTCACCACACGTCTCCGAGGACCGTCTCTTTTCCCTTGAGATCGGCTTGTGAGTTCTTAATGCAGGTATTTGGTTTGCAGCTGAATATGGAGGTTGAGCTTGCAGCTCAGCTAAGAGAGAAGCATATTTTGAGAACTCAAACCCTCCTCTGTGATATGTTGTTGCGGGATGCACCTATAGGAATCGTATCCCAATCACCCAATATCATGGATTTGGTCAAATGCGACGGTGCAGCACTGTACTATGGGAAACGGTTTTGGCTCTTGGGAATTACACCTAACGATGCTCAGATTAAGGAAATTGCTGATTGGCTCTTGGAACATCATCAGGATTCGACCGGTTTGAGTACAGACAGTCTGGCCGATGCAGGTTACCCTGGCGCTGCGCAGCTTGGTGATGCTGTGTGTGGAATGGCAGCAGCGAAGATTACCTCTAAAGACTTTCTTTTCTGGTTCAGGTCGCACACCGCCAAGGAGATCAAATGGGGAGGTGCCAAGCACGATCCTGATGAGAAGGATGACGGCCGAAAAATGCATCCCCGGTCTTCGTTTAAGGCCTTTCTAGTAGTTGTGAAGAGAAGAAGTTTACCATGGGAAGACATAGAAATGGACGCAATTCACTCTCTTCAACTCATTTTGAGAGGTTCATTTCAGGATATTGACGATAGTGACACCAAAACTATGATACATGCCCGACTGAATGACTTGAAGCTCCAGGGCATGGATGAGCTCAGCACAGTCGCTAATGAAATGGTTAGATTGATAGAGACAGCGACCGCACCTATTCTCGCTGTGGACTCAGGTGGATTCATTAATGGTTGGAACGCCAAAGTAGCTGAACTAACAGGGCTTCCAGTCGAAGAAGCCATGGGTCGGTCGCTGGTAAAGGATTTAATTTTAAATGAATCAATCGATGTCGTGCAGCGGCTTCTCCACCTCGCACTACAAGGTGACGAAGAACAAAACATTGAGATTCAATTGAAGACCTTCGGTCCACAAAAAGAGAAAGGCGCGGTGATTTTGATAGTGAATGCTTGCTCTAGTAGAGATGTTCAAGACAATGTGGTCGGAGTATGTTTTGTTGGACAGGATGTGACAGGTCAAAAACAGGTTTTGGATAAATTCACTCGGATACAAGGGGACTATAAGGCTATAGTTCAGAATCCGAACCCTCTGATCCCTCCCATATTCGGTACTGATGAGTATGGATACTGTTCTGAGTGGAATCCTTCAATGGAAAAGCTTACTGGATGGAAGAGAGAAGAGGTGATTGGAAAACTGCTAGTTGGCGAAATTTTTGGTATTCAACTTATGTGTTGCCGACTCAAGAGCCAAGATGCAATGACGAAATTCATGATTGTACTAAATGGTGCCATGGACGGTCAAGACACAGATCGATTTCCCTTCTCCTTTTTTGATAGACAAGGGAAGTACGTGGATCCCTTACTCACAGTGAACAAGAGAACTGATGCAGAAGGAAGCATCACTGGCGTATTTTGCTTTTTGCACACAACCAGTGTGGAATTGTTACAAGCATTGACTGTTCAACGTTCGACTGAGAAAGTTGCTTTCGCAAAACTCAAGGAATTGGCTTACATTCGACAGGAGATCAAGAATCCTTTGTATGGTATAGTATTCACACGTAATTTGATGGAAGACACAGATTTGTCTGTAGACCAAAGGCAATTCGTGGAGACTAGCGCGGTCTGTGAACGTCAACTGCGCAAAATATTGGATGATTTGGATCTTGAGAGTATCGAGGACGGTTACTTAGAGCTGGATACAACTGAGTTTGAGATGGGAACAGTGATGGACGCTGTTGTCAGCCAAGGAATGATCACATCAAGAGAAAAGGGTCTTCAATTAATCCGGGAGACTCCCAGTGAGATTAAGAACATGTGTTTATATGGGGACCAAGTCCGGTTACAACAAGTGCTTGCAGACTTTTTGTTAAATGCTGTGCGATTCACCCCATCCTCTGAAGGCTGGGTCGGGATCAAGGTGGTCCCAACAAAGAAGCGCCTGGGTCGAGGCGTTCATGTCATGCACCTAGAATTCAGAGTTACACATCCTGGACTGGGTCTTCCTGAAGAGCTGGTTCATGAAATGTTTGGTCGAGGACGAGGCATGACTCAAGAAGGCCTGGGTCTGAGTATGTGTCGTAAACTTGTAAAGCTAATGAATGGTACTGTTCAATATATCAGAGAAACAGGTAAGAGCTGCTTTTTAGTTGAAGTAGAGCTTCCCTTGGCACAGAGAGATGATGCAGGTAGTGTGAGATCTACTGTTGTCTAG
Protein Sequence
- >Pp3c16_20280
MSTPKLAYSSGSSVKSKHSVRVAQTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTGENVSAQAVTAYLQRMQRGGLMQTFGCMLCVEESNFRVIAFSENAPEMLDLMPQAVPSVGQQEVLGIGTDARTLFTPSSAAALEKCAGAVDVTMLNPISVHCRSSGKPFYAILHRIDVGLVIDFEPVRSNDAIVSSAGVLQSHKLAAKAISRLQALPGGDIGLLCDIVVQEVRELSGYDRVMAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMIGDCFASPVKVIQDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNARGGQQRGRKLWGLVVCHHTSPRTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPNDAQIKEIADWLLEHHQDSTGLSTDSLADAGYPGAAQLGDAVCGMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPDEKDDGRKMHPRSSFKAFLVVVKRRSLPWEDIEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSGGFINGWNAKVAELTGLPVEEAMGRSLVKDLILNESIDVVQRLLHLALQGDEEQNIEIQLKTFGPQKEKGAVILIVNACSSRDVQDNVVGVCFVGQDVTGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEWNPSMEKLTGWKREEVIGKLLVGEIFGIQLMCCRLKSQDAMTKFMIVLNGAMDGQDTDRFPFSFFDRQGKYVDPLLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRSTEKVAFAKLKELAYIRQEIKNPLYGIVFTRNLMEDTDLSVDQRQFVETSAVCERQLRKILDDLDLESIEDGYLELDTTEFEMGTVMDAVVSQGMITSREKGLQLIRETPSEIKNMCLYGDQVRLQQVLADFLLNAVRFTPSSEGWVGIKVVPTKKRLGRGVHVMHLEFRVTHPGLGLPEELVHEMFGRGRGMTQEGLGLSMCRKLVKLMNGTVQYIRETGKSCFLVEVELPLAQRDDAGSVRSTVV